1bco - reference 1


Name                 ribonuclease h		

Number of sequences              5
Alignment Length                 216
Longest Sequence                 200
Shortest Sequence                135
Average Percent Identity         11
Maximum Percent Identity         24
Minimum Percent Identity         6

Sequence Name    SWISSPROT Accession
1bco                 P07636         
1vsd                 O39643         
1itg                 P03366         
1kfd                 P00582         
1hjrA                P24239         

Family   1bco 1vsd 1itg 1kfd 1hjrA


1bco         1  ...ehldamqWINGDgylhnvfvrwfngdvirpKTWFWqdvk...trkil
1vsd         1  plreglgplqIWQTDftleprm.......aprsWLAVTvdta...ssaiv
1itg         1  .....dcspgIWQLDcthle............gKVILVavhv..asgyie
1kfd         1  ...aklekapVFAFDtetdsl......dnisanLVGLSfaie....pgva
1hjrA        1  ........aiILGIDpgsr............vtGYGVIrqvgrqlsylgs

1bco        45  gwrcd....vseniDSIRLSFMDVVtrygipedfHITIDNtrgaankwlt
1vsd        41  vtqh.....grvtsVAAQHHWATAIavlgrp..kAIKTDN..gscfts..
1itg        32  aevi.....paetgQETA.YFLLKLagrwp..vkTVHTDN..gsnfts..
1kfd        38  ayipvahdyldapdQISRERALELLkplledekaLKVGQN..........
1hjrA       31  gcirtkvddlpsrlKLIYAGVTEIItqfq.pd..YFAIEQvfmaknads.

1bco        91  ggapnryrfkvkeddpKGLFLlm.....gakmhwtsvvagkgwgqa.kpv
1vsd        80  .............kstREWLArw.....giaht..tgipgnsqgqa..mv
1itg        70  .............ttvKAACWwa.....gikqe..fgipynpqsqg..vv
1kfd        78  ............lkydRGILAnygielrgiafd..tmlesyilnsvagrh
1hjrA       77  .........alklgqaRGVAIvaavnqelpvfey.aarqvkqtvvgigsa

1bco       135  erafgvggLEEYVDkhpalagaytgpnpqakpdnygdravdaelflkTLA
1vsd       108  era..nrlLKDKIRvlaegdg..................fmkriptsKQG
1itg        98  es..mnkeLKKIIGqvrd.......................qaehlkTAV
1kfd       114  d...mdslAERWLKhktitfeeiagkgknqltfn.qialeeagryaaEDA
1hjrA      117  eksqvqhmVRTLLKlpanp........................qadaADA

1bco       185  EGVamfnartgretem
1vsd       138  ELLakamyalnhfnl.
1itg       123  QMAvfihnkkrkg...
1kfd       160  DVTlqlhlkmwpd...
1hjrA      143  LAIaithchvsqnam.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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