1bbt3 - reference 1
Name foot-and-mouth disease virus
Number of sequences 5
Alignment Length 216
Longest Sequence 192
Shortest Sequence 149
Average Percent Identity 13
Maximum Percent Identity 23
Minimum Percent Identity 7
Sequence Name SWISSPROT Accession
1bbt3 P03305
1aym3 Q82122
1bbt2 P03305
1aym1 Q82122
1bbt1 P03305
Family 1bbt3 1aym3 1bbt2
Family 1aym1
Family 1bbt1
1bbt3 1 .ft.nlldvaeacptfl......rfeggvpyvtt...ktdsdrvlaqfdm
1aym3 1 .vk.nliemcqvdtlipinstqsnignvsmytvtlspqtklaeeifaikv
1bbt2 1 gletrvvqae.............rffkthlfdwv...tsdsfgrchllel
1aym1 1 ...emsvesflgrs.........gcihesvldiv...dnyndqsftkwni
1bbt1 1 .qhtdvsfim.................drfvkv.....tpqnqinildlm
1bbt3 40 slaakhmsntfLAGLAQYYTQYSGTINLHFmftgpt....dakarymVAY
1aym3 49 diashplattlIGEIASYFTHWTGSLRFSFmfcgta....nttlkvlLAY
1bbt2 35 ptdhk....gvYGSLTDSYAYMRNGWDVEVtavgnq....fnggcllVAM
1aym1 36 nlqem....aqIRRKFEMFTYARFDSEITMvpsvaakdghighivmqYMY
1bbt1 28 qvpsh....tlVGGLLRASTYYFSDLEIAVkhe............gdLTW
1bbt3 86 APPGMEpp..ktpeaaah..cihaewdtglnSKFTFSIPYLSAADYtyta
1aym3 95 TPPGIGkp..rsrkeaml..gthvvwdvglqSTVSLVVPWISASQYrftt
1bbt2 77 VPELCSiq.krelyqltl..fphqfinprtnMTAHITVPFVGVNRYdqyk
1aym1 82 VPPGAPipttrddyawqsgtnasvfwqhg.qPFPRFSLPFLSIASAyymf
1bbt1 62 VPNGAP......ekaldnttnptayhk...aPLTRLALPYTAPHRVlatv
1bbt3 132 s..........dvaettnvqgwvclfqithg......kadgdalvvlasa
1aym3 141 p............dtyssagyitcwyqtnfvv..ppntpntaemlcfvsg
1bbt2 124 v.................hkpwtlvvmvvapltvntegapqikvyaniap
1aym1 131 ydgydgdtyksrygtvvtndmgtlcsrivt....seqlhkvkvvtriyhk
1bbt1 103 yngec....xxxrtlptsfnygaikat...............rvtellyr
1bbt3 166 gkdfelrlpvdarae.
1aym3 177 ckdfclrmardtdlhk
1bbt2 157 t.nvhvagefpske..
1aym1 177 akhtkawcprppravq
1bbt1 134 mkraetycprpllaih
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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