1tis - reference 1


Name                 Thymidylate sythase

Number of sequences              5
Alignment Length                 314
Longest Sequence                 295
Shortest Sequence                263
Average Percent Identity         50
Maximum Percent Identity         58
Minimum Percent Identity         43

Sequence Name    SWISSPROT Accession
tysy_bpt4            P00471         
tysy_ecoli           P00470         
drts_toxgo           Q07422         
tysy_cryne           P45351         
drts_leiam           P16126         

Family   tysy_bpt4 tysy_ecoli drts_toxgo tysy_cryne drts_leiam


tysy_bpt4    1  mkQYQDLIKDIFENGYETDDRTGTGTIALF.GSKLRWDL.tkgFPAVTTK
tysy_ecoli   1  mkQYLELMQKVLDEGTQKNDRTGTGTLSIF.GHQMRFNL.qdgFPLVTTK
drts_toxgo   1  ..QYLDLIADIINNGRTMDDRTGVGVISKF.GCTMRYSL.dqaFPLLTTK
tysy_cryne   1  ..QYLDLIRRIINVGEVRPDRTGTGTVALFAPPSFRFSLadntLPLLTTK
drts_leiam   1  .rQYLELIDRIMKTGIAKEDRTGVGTLSLF.GAQMRFSLrdnrLPLLTTK

tysy_bpt4   49  KLAWKACIAELIWFLSGSTNVNDLrliqhdsliQGKTVWDENYENQakdl
tysy_ecoli  49  RCHLRSIIHELLWFLQGDTNIAYLhe.......NNVTIWDE.WADEn...
drts_toxgo  47  RVFWKGVLEELLWFIRGDTNANHLse.......KGVKIWDKNVTREflds
tysy_cryne  49  RVFLRGVIAELLWFVSGCTDAKMLss.......QGVGIWDGNGSKEflek
drts_leiam  49  RVFWRGVCEELLWFLRGETNAQLLad.......KDIHIWDGNGSREflds

tysy_bpt4   99  gyhs....GELGPIYGKQWR.............dFGGVDQIIEVIDRIKK
tysy_ecoli  88  ........GDLGPVYGKQWRawp........tpdGRHIDQITTVLNQLKN
drts_toxgo  90  rnlphrevGDIGPGYGFQWRhfgaaykdmhtdytGQGVDQLKNVIQMLRT
tysy_cryne  92  vglghrreGDLGPVYGFQWRhfgaeytdadgdykGKGVDQLQRVIDTIKN
drts_leiam  92  rgltenteMDLGPVYGFQWRhfgaeyrgleanydGEGVDQIKFIVETIKA

tysy_bpt4  132  LPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVr.........ngyLDLQ
tysy_ecoli 122  DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVa.........dgkLSCQ
drts_toxgo 140  NPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVn........dqkeLSCI
tysy_cryne 142  NPTDRRIILSAWNPKDLPLMALPPCHMFCQFFVslppadspgskpkLSCL
drts_leiam 142  NPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVnt.......ekseLSCM

tysy_bpt4  173  WYQRSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNH
tysy_ecoli 163  LYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNH
drts_toxgo 182  MYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYTNH
tysy_cryne 192  MYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYRDH
drts_leiam 185  LYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSH

tysy_bpt4  223  VEQCKEILRREPKELCELVIsglpykfrylstKEQLKYVLKLRPKDFVLN
tysy_ecoli 213  MDQTHLQLSREPRPLPKLII............KRKPESIFDYRFEDFEIE
drts_toxgo 232  VEALKEQLRREPRPFPIVNIln..........KERIKEIDDFTAEDFEVV
tysy_cryne 242  VEPLKTQLEREPRDFPKLKWa.........rsKEEIGDIDGFKVEDFVVE
drts_leiam 235  IDALKAQLERVPHAFPTLVF............KEERQFLEDYELMDMEVI

tysy_bpt4  273  NYVSHPPIKGKMAv
tysy_ecoli 251  GYDPHPGIKAPVA.
drts_toxgo 272  GYVPHGRIQMEMA.
tysy_cryne 283  GYKPWGKIDMKMS.
drts_leiam 273  DYVPHPPIKMEMA.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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