1sesA - reference 1


Name                 Seryl-tRNA synthetase										

Number of sequences              5
Alignment Length                 465
Longest Sequence                 442
Shortest Sequence                417
Average Percent Identity         33
Maximum Percent Identity         41
Minimum Percent Identity         29

Sequence Name    SWISSPROT Accession
sys_theth            P34945         
sys_mycge            P47251         
sysc_yeast           P07284         
sys_halma            P54221         
sys_haein            P43833         

Family   sys_theth sys_mycge sysc_yeast sys_halma sys_haein


sys_theth    1  mvdlkrlrqe....pEVFHRAIREKgvald.lEALLALDREVQELKKRLQ
sys_mycge    1  mldpnklrnn....yDFFKKKLLERnnveqllNQFIQTDKLMRKNLQQLE
sysc_yeast   1  mldinqfiedkggnpELIQSRQKARnasveivDEIISDYKDWVTRFKELD
sys_halma    1  ml.srqfvreh...pETVRDAIERKgvtgvdlDEILDIDEEWRELKAEGD
sys_haein    1  midpnllrnn....lAEVAEKLKVKrnfmldtEKLTALEDQRKNLQVTTE

sys_theth   46  EVQTERNQVAKRVpkap....peEKEALIARGKALGEEAKRLEEALREKE
sys_mycge   47  LANQKQSLLAKQVakqk......DNKKLLAESKELKQKIENLNNAYKDSQ
sysc_yeast  51  ELNKKFNKLQKDIglkknf..keDASGLLAEKEKLTQQKKELTEKEQQED
sys_halma   47  GLRQERNEVSSKIgelkqdgkdeEAQEAIDRSQELKDELQDIEERADELE
sys_haein   47  NLQAERNARSKAIgaakar..geDIAPLLAEMDDMGNQLTEAKAQLDAVL

sys_theth   92  ARLEALLLQVPLPPWPGAPVG.GEEANREIKRVGgppefsfpp.......
sys_mycge   91  NISQDLLLNFPNIAHESVPVGKNSEANLELLKEGrkpvfdfkp.......
sysc_yeast  99  KDLKKKVFQVGNIVHPSVVVS.NDEENNELVRTWkpedleavpiasvtgk
sys_halma   97  SQLEEALLELPNIPHESVPTGEGEADNVERYREGf.ddlrdlp.......
sys_haein   95  AEINQIALSIPNLPADEVPLGKDDTENKEILRWGtprtfdf.........

sys_theth  134  ....ldHVALMEK.NGWWEPRISQVSGSRSYALKGDLALYELALLRFAMD
sys_mycge  134  ....lpHRELCEKLNLVFADKATKISGTRFVAYTDKAAKLLRAITNLMID
sysc_yeast 148  paslgsHHEILLRLDGYDPDRGVKICGHRGYFFRNYGVFLNQALINYGLQ
sys_halma  139  .devvpHYDLGEDLDLLDFERGAKVSGGGYQFVKGEGARLEHALIQFMLD
sys_haein  136  ..evkdHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLD

sys_theth  179  Fmarr.gFLPMTLPSYAREKAFLGTGHFPATRDQVWai........aetd
sys_mycge  180  Lnksk..YQEWNLPVVINELSLRSTGQLPKFKDDVFkl........entr
sysc_yeast 198  Flaak.gYIPLQAPVMMNKELMSKTAQLSEFDEELYki......dvgede
sys_halma  188  Vhreq.eYVDVLPPIPVNSDSMEGTGQLPKFAEDAYrvgarqdddydsdd
sys_haein  184  LhteqhgYLETYVPYLVNHATLYGTGQLPKFGEDLFhtlale....geqp

sys_theth  220  lYLTGTAEVVLNALHSGEIL..pyEALPLRYAGYAPAFRSEAGSFGKDVR
sys_mycge  220  yYLSPTLEVQLINLHANEIF..neEDLPKYYTATGINFRQEAGSAGKQTK
sysc_yeast 241  kYLIATSEQPISAYHSGEWFkpeqEQLPIHYVGYSSCFRREAGSHGKDAW
sys_halma  237  lWLLPTAEVPVTNMYRGEIL..ldDDLPVKHQAFSPNFRREAGEHGTETR
sys_haein  230  yALIPTAEVPVTNLVRDVII..deAELPIKMTAHTPCFRSEAGSYGRDTR

sys_theth  268  GLMRVHQFHKVEQYVLteaslEASDRAFQELLENAEEILRLLELPYRLVE
sys_mycge  268  GTIRLHQFQKTELVKFck..pENAINELEAMVRDAEQILKALKLPFRRLL
sysc_yeast 291  GVFRVHAFEKIEQFVIte..pEKSWEEFEKMISYSEEFYKSLKLPYRIVG
sys_halma  285  GYVRVHQFHKVELVNFvr..pENSYDRLESLLDEAAEVLDRLELPYRVLD
sys_haein  278  GLIRMHQFDKVEMVQIvd..pDKSMEALEELTGHAEKVLQLLNLPYRKVL

sys_theth  318  VATGDMGPGKWRQVDIEVYLPse.........grYRETHSCSALLDWQAR
sys_mycge  316  LCTGDMGFSAEKTYDLEVWMAas.........neYREVSSCSSCGDFQAR
sysc_yeast 339  IVSGELNNAAAKKYDLEAWFPyq.........keYKELVSCSNCTDYQSR
sys_halma  333  MCTGDMGFTQAKKYDIEVWAPgddmedgpdrggrWLEVSSVSNFEDFQAR
sys_haein  326  LCTGDMGFGSCKTYDLEVWVPaq.........ntYREISSCSNMWDFQAR

sys_theth  359  RANLRYrd...pegrvrYAYTLNNTALATPRILAMLLENHQLQDGRVRVP
sys_mycge  357  RAMIRYkdn..ingknsYVATLNGTALSIDRIFAAILENFQTKDGKILIP
sysc_yeast 380  NLEIRCgikmgkdrekkYVHCLNSTLAATQRALCCILENYQTEDG.LVVP
sys_halma  383  RAGLRYrpe..rhesadYLHTLNGSGLAVPRVLVAIMEYYQNDDGTITVP
sys_haein  367  RMQARCkak..gdkktrLVHTLNGSGLAVGRTLVAVLENYQNADGSITVP

sys_theth  406  QALIPYMGkevlepc
sys_mycge  405  QALKKYLDfdtik..
sysc_yeast 429  EVLRKYIPge.....
sys_halma  431  EPLRPYMGgqev...
sys_haein  415  EELRPYMG.......

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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