1ppn - reference 1


Name                 papain

Number of sequences              5
Alignment Length                 228
Longest Sequence                 220
Shortest Sequence                212
Average Percent Identity         46
Maximum Percent Identity         59
Minimum Percent Identity         41

Sequence Name    SWISSPROT Accession
1ppn                 P00784         
1yal                 P14080         
1act                 P00785         
1atk                 P43235         
1cjl                 P07711         

Family   1ppn 1yal 1act 1atk 1cjl


1ppn         1  IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSE
1yal         1  YPQSIDWRAKGAVTPVKNQGACGSXWAFSTIATVEGINKIVTGNLLELSE
1act         1  LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKITSGSLISLSE
1atk         1  APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSP
1cjl         1  APRSVDWREKGYVTPVKNQGQCGSSWAFSATGALEGQMFRKTGRLISLSE

1ppn        51  QELLDCdr..rSYGCNGGYPWSALQLVAQY.gIHYRNTYPYEGVQRYCRS
1yal        51  QELVDCdk..hSYGCKGGYQTTSLQYVANN.gVHTSKVYPYQAKQYKCRA
1act        51  QELIDCgrtqnTRGCDGGYITDGFQFIINDggINTEENYPYTAQDGDCDV
1atk        51  QNLVDCvs..eNDGCGGGYMTNAFQYVQKNrgIDSEDAYPYVGQEESCMY
1cjl        51  QNLVDCsgpegNEGCNGGLMDYAFQYVQDNggLDSEESYPYEATEESCKY

1ppn        98  REKgpyAAKTDGVRQVqpynEGALLYSIA.NQPVSVVLEAAGKDFQLYRG
1yal        98  TDKpgpKVKITGYKRVpsncETSFLGALA.NQPLSVLVEAGGKPFQLYKS
1act       101  ALQdqkYVTIDTYENVpynnEWALQTAVT.YQPVSVALDAAGDAFKQYAS
1atk        99  NPTg.kAAKCRGYREIpegnEKALKRAVARVGPVSVAIDASLTSFQFYSK
1cjl       101  NPKy.sVANDAGFVDIpk.qEKALMKAVATVGPISVAIDAGHESFLFYKE

1ppn       147  GIFVGP.CGN.kVDHAVAAVGYG........pNYILIKNSWGTGWGENGY
1yal       147  GVFDGP.CGT.kLDHAVTAVGYGts....dgkNYIIIKNSWGPNWGEKGY
1act       150  GIFTGP.CGT.aVDHAIVIVGYGte....ggvDYWIVKNSWDTTWGEEGY
1atk       148  GVYYDESCNSdnLNHAVLAVGYGiq....kgnKHWIIKNSWGENWGNKGY
1cjl       149  GIYFEPDCSSedMDHGVLVVGYGfestesdnnKYWLVKNSWGEEWGMGGY

1ppn       187  IRIKRgtgnsygvCGLYTSSFYPvkn..
1yal       191  MRLKRqsgnsqgtCGVYKSSYYPfkgfa
1act       194  MRILRnvgga.gtCGIATMPSYPvky..
1atk       194  ILMARnkn...naCGIANLASFPkm...
1cjl       199  VKMAKdrr...nhCGIASAASYPtv...

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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