1ivy - reference 5


Name                 human protective protein

Number of sequences              7
Alignment Length                 482
Longest Sequence                 441
Shortest Sequence                406
Average Percent Identity         36
Maximum Percent Identity         70
Minimum Percent Identity         26

Sequence Name    SWISSPROT Accession
prtp_mouse           P16675         
yua6_caeel           P52715         
cbpy_yeast           P00729         
yby9_yeast           P38109         
cbpy_picpa           P52710         
cbpx_arath           P32826         
cps1_penja           P34946         

Family   prtp_mouse yua6_caeel cbpy_yeast yby9_yeast cbpy_picpa cbpx_arath cps1_penja


prtp_mouse   1  pglakqpsfrqysgylra.sds.khfhywfvesqndpknspvvlwlnggp
yua6_caeel   1  pgapis.nfkqysgyynvgtkknhmlhywfvesqsnpstdpvllwltggp
cbpy_yeast   1  kilgidpnvtqytgyldveded.khfffwtfesrndpakdpvilwlnggp
yby9_yeast   1  psklgidtvkqwsgymdy.kds.khffywffesrndpandpiilwlnggp
cbpy_picpa   1  pevlkvdftkqysgyldveadd.khffywffesrndpqndpiilwlnggp
cbpx_arath   1  .ggptvddlghhagyyklpksrgasmfyfffesrnk.kdapvviwltggp
cps1_penja   1  ...ettpgvnqysgylsv.gsn.mnmwfwffearnnpqqaplaawfnggp

prtp_mouse  49  gcssldglltehgpfliqpdgvtleynpyawnlianvlyiespagvgfsy
yua6_caeel  50  gcsglsalltewgpwnvntdgatlrtnpyswnknasiltleapagvgysy
cbpy_yeast  50  gcssltglffelgpssigpdlkpi.gnpyswnsnatvifldqpvnvgfsy
yby9_yeast  49  gcssftgllfelgpssigadmkpi.hnpyswnnnasmifleqplgvgfsy
cbpy_picpa  50  gcssltglffelgssrinenlkpi.fnpyswngnasiiyldqpvnvgfsy
cbpx_arath  49  gcsselavfyengpfkitsnmsla.wneygwdqvsnllyvdqpvgtgfsy
cps1_penja  46  gcssmiglfqengpchfvngdstpslnenswnnyanmiyidqpigvgfsy

prtp_mouse  99  sddk.myvtndtevaennyealkdffrlfpey..kdnklfltgesyagiy
yua6_caeel 100  atdn.niatgddqtasenwealvaffnefpqy..kgndfyvtgesyggiy
cbpy_yeast  99  sgss..gvsntvaagkdvynflelffdqfpeyvnkgqdfhiagesyaghy
yby9_yeast  98  gdek...vsstklagkdayiflelffeafphl..rsndfhiagesyaghy
cbpy_picpa  99  ssss...vsntvvagedvyaflqlffqhfpey..qtndfhiagesyaghy
cbpx_arath  98  ttdksdirhdetgvsndlydflqaffaehpkl..akndfyitgesyaghy
cps1_penja  96  gtdd...vtstvtaapyvwnllqafyaqrpey..esrdfaiftesygghy

prtp_mouse 146  iptlavlvmq...........dpsMNLQGLAVGNGLAsyeqndnslvyfa
yua6_caeel 147  vptlvqtildrqs........qshINIKGLAIGNGCVsanegvdslvnfl
cbpy_yeast 147  ipvfaseilshk.........drnFNLTSVLIGNGLTdpltqynyyepma
yby9_yeast 143  ipqiaheivvknp........ertFNLTSVMIGNGITdpliqadyyepma
cbpy_picpa 144  ipvfadeilsqk.........nrnFNLTSVLIGNGLTdpltqyryyepma
cbpx_arath 146  ipafasrvhkgnkane.....gvhINLKGFAIGNGLTdpalqypaypdya
cps1_penja 141  gpefasyieqqnaaikagsvtgqnVNIVALGVNNGWIdstiqekayidfs

prtp_mouse 185  y....yhgllgnrlwtslqthc...caqn..kcnfydnkdpe.cvnnl..
yua6_caeel 189  y....hhgvvdqakwehmktsc...chndtdacpwhsfsefsacgefv..
cbpy_yeast 188  cgeggepsvlpseecsamedsler.clgliesc.ydsqsvws.cvpatiy
yby9_yeast 185  cgkggyhpvlsseecekmskaagr.crrlnklc.yasksslp.civatay
cbpy_picpa 185  cgeggapsvlpadecenmlvtqdk.clsliqac.ydsqsaft.capaaiy
cbpx_arath 191  l....emglitqkehdrlekivpl.celsiklc.gtdgtts..clasylv
cps1_penja 191  ynns.yqqiidsstrdslldaynnqclpalqqc.sqsgstsd.ctnadsv

prtp_mouse 223  ...levsrivgksglNIYNLYAPCaggvpgrhryedtlvvqdfgniftrl
yua6_caeel 230  ..eatqqtawn.gglNPYNMYADCistsasf..........rfgmeyerr
cbpy_yeast 235  c.nnaqlapyqrtgrNVYDIRKDCeg........................
yby9_yeast 232  c.dsallepyintglNVYDIRGPCednst.....................
cbpy_picpa 232  c.nnaqmgpyqrtgkNVYDIRKECdg........................
cbpx_arath 233  cnslfsgvmshaggvNYYDIRKKCv.........................
cps1_penja 238  cyqniegpisssgdfDVYDIREPSnd........................

prtp_mouse 270  plkrrfpealmrsgdkvrldppctntt.apsnYLNNPYVRKALHipeslp
yua6_caeel 267  fnkkytpevl........gtvpcldes.pvtnYLNRQDVRKALGipsslp
cbpy_yeast 260  ...................gnlcyptlqdiddYLNQDYVKEAVGae..vd
yby9_yeast 260  ...................dgmcytglryvdqYMNFPEVQETLGsd..vh
cbpy_picpa 257  ...................gslcykdlefidtYLNQKFVQDALGae..vd
cbpx_arath 258  ...................gslcydfs.nmekFLNLQSVRKSLGvg..di
cps1_penja 264  ......................pyppk.tystYLSDPTVVKAIGar...t

prtp_mouse 319  rwdmcnflvnlqyrrlyqsmnsqylkllss...qkyqillyngdvdmacn
yua6_caeel 308  awsicsnaisygykrqygdmtsrvlnavnn...nnlkmmlyngdvdlacn
cbpy_yeast 289  hyescnfdinrnflf.agdwmkpyhtavtdllnqdlpilvyagdkdficn
yby9_yeast 289  nysgcdndvftgflf.tgdgskpfqqyiaellnhnipvliyagdkdyicn
cbpy_picpa 286  tyescnfeinrnflf.agdwmkpyhehvssllnkglpvliyagdkdficn
cbpx_arath 286  dfvscstsvyqamlv...dwmrnlevgiptlledgisllvyageydlicn
cps1_penja 288  nyqecpngpynkfas.tgdnprsflstlssvvqsginvlvwagdadwicn

prtp_mouse 366  fmgdewfvdslnqkmevqrr.....pwlvdy.gesgeqvagfvkecshit
yua6_caeel 355  almgqrftdklgltlskkkt.....hftvk..gqiggyvtqykg..sqvt
cbpy_yeast 338  wlgnkawtdvlpwkydeefasqkvrnwtasitdevagevksy....khft
yby9_yeast 338  wlgnhawsnelewinkrryqrrmlrpwvsketgeelgqvkny....gpft
cbpy_picpa 335  wlgnrawtdvlpwvdadgfekaevqdwlvn..grkagefkny....snft
cbpx_arath 333  wlgnsrwvnamewsgktnfgaakevpfivd..gkeagllkty....eqls
cps1_penja 337  wlgnyevanavdfpgnaqfsaldlapytvn..gvekgqfktv....dnfs

prtp_mouse 410  fltikgaghmvptdkpraaftmfsrflnkepy
yua6_caeel 396  fatvrgaghmvptdkpavaehiiqsflfnkaf
cbpy_yeast 384  ylrvfngghmvpfdvpenalsmvnewih....
yby9_yeast 384  flriydaghmvpydqpeaslemvnswisgn..
cbpy_picpa 379  ylrvydaghmapydqpenshemvnrwisgd..
cbpx_arath 377  flkvrdaghmvpmdqpkaalkmlkrwmens..
cps1_penja 381  flkvygaghevpyyqpdtalqafkqiiqkkp.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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