gal4 - reference 1


Name                 gal4

Number of sequences              5
Alignment Length                 440
Longest Sequence                 395
Shortest Sequence                335
Average Percent Identity         14
Maximum Percent Identity         21
Minimum Percent Identity         12

Sequence Name    SWISSPROT Accession
put3_yeast           P25502         
yhx8_yeast           P38699         
cat8_yeast           P39113         
yb00_yeast           P38114         
s50366               Q05854         

Family   put3_yeast yhx8_yeast cat8_yeast yb00_yeast s50366


put3_yeast   1  .ssgqeeviqfqlpsynyTKLLIDcfinyndg..cfyffneglvkcgink
yhx8_yeast   1  .tswvredgsfksidrslLDRFIAayfkhnhr..lfpmidkiaflndaa.
cat8_yeast   1  .ekpandqddells.lteIKELLHlffkfwsn..qvpilnndhfliyfn.
yb00_yeast   1  .sspssdnilyplprlaiAKRLLK.nikcpslasllhivdvdqclqfad.
s50366       1  kkeflmydpifeln.eklSRSFLDtfftrlqf..kypildeqeiytfyd.

put3_yeast  48  lylenkwlyydntkkaldne........ndpilqavwfcKILLILAVGem
yhx8_yeast  47  titdferly...................dnknypdsfvfKVYMIMAIGct
cat8_yeast  46  nfvevvkhlstenletnnttks......tvttnheifalKLLMMLQMGll
yb00_yeast  48  vhfdpak.......................grltssqafLLNICLCLGat
s50366      47  .hylhnkilippsspatssaappsnshsyseiefhflsgRMWLVFSISay

put3_yeast  90  ylgsinnemlkn.............ysnqpklpgskFFQMGSKIfnclfs
yhx8_yeast  78  tlqragmvsqde.................eclsehlAFLAMKKFrsviil
cat8_yeast  90  vkikmekikytv..............pknpkakyarLMAYYHQLsliipk
yb00_yeast  75  vtnfeekqelvdednhetyyfekfelwrlrsftflnSVYYYHKLsvara.
s50366      96  llmttgk....................ykgfpphryFSTAIRHItkcglh

put3_yeast 127  serlenvt..kkGGIEVLLLYAFFLQVADYTLASYFYFGQALRTCLILGL
yhx8_yeast 111  q.........diETVRCLLLLGIYSFFEPKGSSSWTISGIIMRLTIGLGL
cat8_yeast 126  npyflnmsttslPSLQLLSLASFYYLNVGDISAIYGVRGRIVSMAQQLRL
yb00_yeast 124  ..........dmTALKALLLLAKFAQQKISASSAVKVLSVAIKVALDLRL
s50366     126  ln........yvQQIELLTLLVLYIIRTDRDSLILYDIIKDVMGISKKKL

put3_yeast 175  Hvd.......sqsdtlsryeIEHHRRLWWTVYMFERMLSSKAGLPLSFTD
yhx8_yeast 152  Nrel....takklksmsaleAEARYRVFWSAYCFERLVCTSLGRISGIDD
cat8_yeast 176  HrcpsavlsvhsnpvlqkfeQSERRLLFWAIYYVDVFASLQLGVPRLLKD
yb00_yeast 164  Nlh.......styedleldeIIKRRRLWCYCFSTDKFFSVVLSRPPFLKE
s50366     168  Hln........qwypndpf.ANKKLRLFWCVYLLERMICVAVGKPYTIKE

put3_yeast 218  ytistalpadiddetieekn..........................shyv
yhx8_yeast 198  editvplpralyvderdd................................
cat8_yeast 226  fdiecalpisdveykdqlsmenekadkkakk...............iqlq
yb00_yeast 207  entdvltdesyvelfrdkilpnlsikyddsklegvkdivsvvnllanhle
s50366     209  sei..nlplfnndsfytkgvhaaa......................pstn

put3_yeast 242  frkaeLISNCVTIVKINAQILSKLYqrqpe......tniiitlkvvikql
yhx8_yeast 216  ...leMTKLMISLRKMGGRIYKQVHsvsa.......grqkltie.qkqei
cat8_yeast 261  gqvssFSLQIIRFAKILGNILDSIFkrgmmde.....ritsevalvhena
yb00_yeast 257  yvpyiQSYFLSRLSLIESQIYYSCFsirttlddtl..deiienvlenqka
s50366     235  dhgvqFINQSLKLRRIESQFVETLQllkndsrsvkqsidqlplvrkffed

put3_yeast 286  le.WRNNLSDSlqvd....................ftqkdedfkisrlst
yhx8_yeast 255  isgLRKELDEIysreserrklkksqmdqvere...nnsttnvisfhssei
cat8_yeast 306  ldnWRNQLPEMyyfqitvngtvnldeiratnqrntetkfdkkdiilfekk
yb00_yeast 305  ldrMRDDLPTIlslenykenmril...........sldsskldfevscct
s50366     285  levWRKSYSTLdvkn...............................fene

put3_yeast 315  nMFTEYFQGINLAVRPllfhfasiqlkrfktsntfvnlqn
yhx8_yeast 302  wLAMRYSQLQILLYRPsalmpkppidsl......stlgef
cat8_yeast 356  iLLLFYFLAKSMIHLPviatkplpknvdnatkkkqsmfnn
yb00_yeast 344  tILLHLRWYHQKITLSlfvisiigdnldqressrhdiaei
s50366     304  tLKLYYYRSVRLLIQPyleffapedrl..frecqaaagqi

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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