451c - reference 1


Name                 cytochrome c				

Number of sequences              5
Alignment Length                 94
Longest Sequence                 87
Shortest Sequence                70
Average Percent Identity         27
Maximum Percent Identity         34
Minimum Percent Identity         23

Sequence Name    SWISSPROT Accession
cy2_rhoge            P00097         
c550_bacsu           P24469         
1dvh                 P04032         
1etp                 Q52369         
1cch                 P00101         

Family   cy2_rhoge c550_bacsu
Family   1dvh 1etp 1cch


cy2_rhoge    1  atpaelatka.gCAVCHQPTAKglgpsyqeiakKYKGQAGAPALMAe..R
c550_bacsu   1  aspeeiy.ka.nCIACHGENYE....gvsgpslKGVGDKKDVAEIKt..K
1dvh         1  adgaaly.ks..CIGCHGADGS...kaamgsakPVKGQ.GAEELYK...K
1etp         1  daeagqg.kvavCGACHGVDGN....spapnfpklagq.geryllkqlqD
1cch         1  qdgealf.kskpCAACHSVDTKmvgpalkevaaknagvegaadtlal..H

cy2_rhoge   48  VRKGS......vgifgklPMTPTPArpiSDADLKLVIDWIL...
c550_bacsu  43  IEKGG............nGMPSGL...vPADKLDDMAEWVSki.
1dvh        41  MKGYA...dgsyggerkaMMTNAV.kkySDEELKALADYMSkl.
1etp        45  IKAGStpgapegvgrkvlEMTGML.dplSDQDLEDIAAYFSsqk
1cch        48  IKNGS......qgvwgpiPMPPNP...vTEEEAKILAEWVLslk

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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