1vln - reference 4


Name                 concanavalin a

Number of sequences              14
Alignment Length                 368
Longest Sequence                 236
Shortest Sequence                118
Average Percent Identity         43
Maximum Percent Identity         60
Minimum Percent Identity         27

Sequence Name    SWISSPROT Accession
lec2_cytsc           P29257         
lec_latsp            P16349         
lec4_grisi           P24146         
lec1_labal           P23558         
lec_eryco            P16404         
lec1_uleeu           P22972         
lec_lotte            P19664         
lecg_arahy           P02872         
lecn_pea             P16270         
lec_onovi            P02874         
lec_phalu            P16300         
arc1_phavu           P19329         
1vln                 P02866         
1fat                 P05087         

Family   lec2_cytsc lec_latsp lec4_grisi lec1_labal lec_eryco lec1_uleeu lec_lotte lecg_arahy lecn_pea lec_onovi lec_phalu arc1_phavu 1vln 1fat


lec2_cytsc   1  ..................................................
lec_latsp    1  ..................................................
lec4_grisi   1  ..................................................
lec1_labal   1  ..................................................
lec_eryco    1  ..................................................
lec1_uleeu   1  ..................................................
lec_lotte    1  ..................................................
lecg_arahy   1  ..................................................
lecn_pea     1  ..................................................
lec_onovi    1  ..................................................
lec_phalu    1  ..................................................
arc1_phavu   1  ..................................................
1vln         1  ..................................................
1fat         1  sndiyfnfqrfnetnlilqrdasvsssgqlrltnlngeprvgslgrafys

lec2_cytsc   1  ..................................................
lec_latsp    1  ..................................................
lec4_grisi   1  ..................................................
lec1_labal   1  ..................................................
lec_eryco    1  ..................................................
lec1_uleeu   1  ..................................................
lec_lotte    1  ..................................................
lecg_arahy   1  ..................................................
lecn_pea     1  ..................................................
lec_onovi    1  ..................................................
lec_phalu    1  ..................................................
arc1_phavu   1  ..................................................
1vln         1  ..................................................
1fat        51  apiqiwdnttgtvasfatsftfniqvpnnagpadglafalvpvgsqpkdk

lec2_cytsc   1  ............snqiVAVEFDTYYn...sawdpqtnp..hIGIDVNTIK
lec_latsp    1  ..............htVAVEFDTFHn...qpwdpdyi...hIGVDINSIK
lec4_grisi   1  .............nqvVAVEFDTWIn..kdwndppyp...hIGIDVNSIV
lec1_labal   1  ............snqiIAVEFDTYFgkaynpwdpdfk...hIGVDVNSIK
lec_eryco    1  ................LGVEFDTFSn....qwdppqvp..hIGIDVNSIR
lec1_uleeu   1  ................VAVEFDTIGs..pvnfddpgfp..hIGIDVNRVK
lec_lotte    1  .............nqfVAVEFDSYHn....iwdpkslrsshVGIDVNSIM
lecg_arahy   1  ............aghfVGVEFDTYSn..seyndpptd...hVGIDVNSVD
lecn_pea     1  .............nrfVGLEFDLYAn....sfdpymr...hIGIDINSLI
lec_onovi    1  .............etvVAVEFDTFSn....rwdpans...hIGINVNSVK
lec_phalu    1  ................VAVEFDTCHn...............LDWDKNSIA
arc1_phavu   1  ..............htVAVVFDTVSn..............rIEIDVNSIR
1vln         1  ............adtiVAVELDTYPn..tdigdpsyp...hIGIDIKSVR
1fat       101  ggflglfdgsnsnfhtVAVEFDTLYn...kdwdpter...hIGIDVNSIR

lec2_cytsc  34  SKK...vsswgf..kngn..vatvlityqpsskslvaslvypsgqtsdkt
lec_latsp   31  SRI...trpwnp..hydt..ysiayiaykaatneldvtvtypnsr....d
lec4_grisi  33  SVA...ttrwenddaygs.siatahitydarskiltvllsyehgr.....
lec1_labal  36  SIK...tvkwdw..rngd..vanvvityraptksltvslsypsdq....t
lec_eryco   29  SIK...tqpfql..dngq..vanvvikydasskilhavlvypssg....a
lec1_uleeu  31  SIN...aerwnk..ryglnnvanveiiyeassktltasltypsdq....t
lec_lotte   34  SLK...avnwnr..vsgs..lekatiiydsqtnilsvvmtsqngq.....
lecg_arahy  34  SVK...tvpwns..vsga..vvkvtviydsstktlsvavtndngd.....
lecn_pea    31  STK...tvrynf..vsgs..ltkvtiiydspsntltavityengq.....
lec_onovi   31  SKI...ttpwgl..knd...yftvtitydat.rslsvssfyrnkp...dd
lec_phalu   20  VNLgigsvpwnfrdydgq..nadvlitydsstkflavslfypitg....k
arc1_phavu  23  PIA.tescnfgh..nnge..kaevritydspkndlrvsllypsse....e
1vln        34  SKK...takwnm..qngk..vgtahiiynsvdkrlsavvsypnad.....
1fat       145  SIK...ttrwdf..vnge..naevlitydsstnllvaslvypsqk....t

lec2_cytsc  77  syiisanvdlkatvpewvrigfsattgqtdnyietHDILSWSFKSKLpa.
lec_latsp   70  yatlrevvdlkqivpewvrvglsastat...yysaHEVYSWSFHSELggt
lec4_grisi  74  dyilshvvdlakvlpqkvrigfsagvg....ydevTYILSWHFFSTLdgt
lec1_labal  75  snivtasvdlkailpewvsvgfsagvgna..akfnHDILSWYFTSNLepn
lec_eryco   68  iytiaeivdvkqvlpewvdvglsgatgaqrdaaetHDVYSWSFQASLpet
lec1_uleeu  72  sisvtsivdlkeilpewvsvgfsggtyig..rqatHEVLNWYFTSNLint
lec_lotte   72  ittiygtidlktvlpekvsvgfsattgnp..erekHDIYSWSFTSTLkep
lecg_arahy  72  ittiaqvvdlkaklpervkfgfsasgslg..grqiHLIRSWSFTSTLitt
lecn_pea    69  istisqnvdlkavlpkdvsvgfsatst....iavsHNIHSWSFTSNLeat
lec_onovi   69  iftvkasvhlrdalpqwvriglsaatgd...lveqHRLYSWSFKSVLpld
lec_phalu   64  rnnvsanvelekvlddwvsvgfsatsg....ayetHDVLSSSFASKLssl
arc1_phavu  64  kchvsatvplekevedwvsvgfsatsgskkettetHNVLSWSFSSNFinf
1vln        72  satvsydvdldnvlpewvrvglsastgl...yketNTILSWSFTSKLksn
1fat       184  sfivsdtvdlksvlpewvsvgfsattginkgnvetNDVLSWSFASKLs..

lec2_cytsc 126  ..................................................
lec_latsp  117  sssn..............................................
lec4_grisi 120  n.................................................
lec1_labal 123  npavnqa...........................................
lec_eryco  118  n.................................................
lec1_uleeu 120  ns................................................
lec_lotte  120  eeqa..............................................
lecg_arahy 120  trrsidnnekkimnmas.................................
lecn_pea   115  tgnivsqv..........................................
lec_onovi  116  sst...............................................
lec_phalu  110  decp.tgenll.......................................
arc1_phavu 114  kgkksersnillnk....................................
1vln       119  sthetnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgs
1fat       232  ..................................................

lec2_cytsc 126  ..................................................
lec_latsp  121  ..................................................
lec4_grisi 121  ..................................................
lec1_labal 130  ..................................................
lec_eryco  119  ..................................................
lec1_uleeu 122  ..................................................
lec_lotte  124  ..................................................
lecg_arahy 137  ..................................................
lecn_pea   123  ..................................................
lec_onovi  119  ..................................................
lec_phalu  120  ..................................................
arc1_phavu 128  ..................................................
1vln       169  svgralfyapvhiwessavvasfeatftflikspdshpadgiaffisnid
1fat       232  ..................................................

lec2_cytsc 126  ..................
lec_latsp  121  ..................
lec4_grisi 121  ..................
lec1_labal 130  ..................
lec_eryco  119  ..................
lec1_uleeu 122  ..................
lec_lotte  124  ..................
lecg_arahy 137  ..................
lecn_pea   123  ..................
lec_onovi  119  ..................
lec_phalu  120  ..................
arc1_phavu 128  ..................
1vln       219  ssipsgstgrllglfpda
1fat       232  ..................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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