1bco - reference 1
Name ribonuclease h
Number of sequences 5
Alignment Length 216
Longest Sequence 200
Shortest Sequence 135
Average Percent Identity 11
Maximum Percent Identity 24
Minimum Percent Identity 6
Sequence Name SWISSPROT Accession
1bco P07636
1vsd O39643
1itg P03366
1kfd P00582
1hjrA P24239
Family 1bco 1vsd 1itg 1kfd 1hjrA
1bco 1 ...ehldamqWINGDgylhnvfvrwfngdvirpKTWFWqdvk...trkil
1vsd 1 plreglgplqIWQTDftleprm.......aprsWLAVTvdta...ssaiv
1itg 1 .....dcspgIWQLDcthle............gKVILVavhv..asgyie
1kfd 1 ...aklekapVFAFDtetdsl......dnisanLVGLSfaie....pgva
1hjrA 1 ........aiILGIDpgsr............vtGYGVIrqvgrqlsylgs
1bco 45 gwrcd....vseniDSIRLSFMDVVtrygipedfHITIDNtrgaankwlt
1vsd 41 vtqh.....grvtsVAAQHHWATAIavlgrp..kAIKTDN..gscfts..
1itg 32 aevi.....paetgQETA.YFLLKLagrwp..vkTVHTDN..gsnfts..
1kfd 38 ayipvahdyldapdQISRERALELLkplledekaLKVGQN..........
1hjrA 31 gcirtkvddlpsrlKLIYAGVTEIItqfq.pd..YFAIEQvfmaknads.
1bco 91 ggapnryrfkvkeddpKGLFLlm.....gakmhwtsvvagkgwgqa.kpv
1vsd 80 .............kstREWLArw.....giaht..tgipgnsqgqa..mv
1itg 70 .............ttvKAACWwa.....gikqe..fgipynpqsqg..vv
1kfd 78 ............lkydRGILAnygielrgiafd..tmlesyilnsvagrh
1hjrA 77 .........alklgqaRGVAIvaavnqelpvfey.aarqvkqtvvgigsa
1bco 135 erafgvggLEEYVDkhpalagaytgpnpqakpdnygdravdaelflkTLA
1vsd 108 era..nrlLKDKIRvlaegdg..................fmkriptsKQG
1itg 98 es..mnkeLKKIIGqvrd.......................qaehlkTAV
1kfd 114 d...mdslAERWLKhktitfeeiagkgknqltfn.qialeeagryaaEDA
1hjrA 117 eksqvqhmVRTLLKlpanp........................qadaADA
1bco 185 EGVamfnartgretem
1vsd 138 ELLakamyalnhfnl.
1itg 123 QMAvfihnkkrkg...
1kfd 160 DVTlqlhlkmwpd...
1hjrA 143 LAIaithchvsqnam.
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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