1csy - reference 1


Name                 SH2			

Number of sequences              5
Alignment Length                 110
Longest Sequence                 104
Shortest Sequence                100
Average Percent Identity         30
Maximum Percent Identity         38
Minimum Percent Identity         27

Sequence Name    SWISSPROT Accession
1csy                 P43405         
1gri                 P29354         
1aya                 P35235         
2pna                 P23727         
1bfi                 P27986         

Family   1csy 1gri 1aya 2pna 1bfi


1csy         1  shekmpWFHGKISREESEQIVligskTNGKFLIRARD..nnGSYALCLLH
1gri         1  emkphpWFFGKIPRAKAEEML.skqrHDGAFLIRESEs.apGDFSLSVKF
1aya         1  ...mrrWFHPNITGVEAENLLltrg.VDGSFLARPSKs.npGDFTLSVRR
2pna         1  .lqdaeWYWGDISREEVNEKLrdt..ADGTFLVRDAStkmhGDYTLTLRK
1bfi         1  hhdektWNVGSSNRNKAENLLrgk..RDGTFLVRESS..kqGCYACSVVV

1csy        49  EGKVLHYRIdkdktgklsipegk.kFDTLWQLVEHYsyka......dgll
1gri        49  GNDVQHFKVlrdgagkyfl.wvv.kFNSLNELVDYHrsts.vsrnqqifl
1aya        46  NGAVTHIKIqn..tgdyydlyggekFATLAELVQYYmehhgqlkekngdv
2pna        48  GGNNKLIKIfh.rdgkygfsdpl.tFNSVVELINHYrnes.laqynpkld
1bfi        47  DGEVKHCVInktatg.ygfaepynlYSSLKELVLHYqhts.lvqhndsln

1csy        92  rvl.tVPcqk
1gri        96  rdieqVPqq.
1aya        94  iel.kYPln.
2pna        95  vkl.lYPvs.
1bfi        95  vtl.aYPvya

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index