2fxb - reference 1


Name                 ferredoxin

Number of sequences              5
Alignment Length                 65
Longest Sequence                 63
Shortest Sequence                55
Average Percent Identity         51
Maximum Percent Identity         72
Minimum Percent Identity         36

Sequence Name    SWISSPROT Accession
1clf                 P00195         
1fca                 P00198         
1blu                 P00208         
FER_BACSC            Q45560         
FER_BUTME            P14073         

Family   1clf 1fca 1blu FER_BACSC FER_BUTME


1clf         1  AYKIADSCVSCGA..CASECPVNAISQGDSIFVIDADTCIDCg......N
1fca         1  AYVINEACISCGA..CEPECPVDAISQGGSRYVIDADTCIDCg......A
1blu         1  ALMITDECINCDV..CEPECPNGAISQGDETYVIEPSLCTECvghyetsQ
FER_BACSC    1  AYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCg......A
FER_BUTME    1  AYKITDECIACGS..CADQCPVEAISEG.SIYEIDEALCTDCg......A

1clf        43  CANVCPVGAPVQE..
1fca        43  CAGVCPVDAPVQA..
1blu        49  CVEVCPVDCIIKDps
FER_BACSC   45  CEAVCPVSAIYHEdf
FER_BUTME   42  CADQCPVEAIVPEd.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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