1dox - reference 1
Name ferredoxin [2fe-2s]
Number of sequences 4
Alignment Length 108
Longest Sequence 96
Shortest Sequence 91
Average Percent Identity 46
Maximum Percent Identity 62
Minimum Percent Identity 40
Sequence Name SWISSPROT Accession
1frr P00235
1fxa P06543
dmpp_psesp P19734
fer_halha P00216
Family 1frr 1fxa dmpp_psesp fer_halha
1frr 1 .ayk.tvlktpsgef.TLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCL
1fxa 1 atfkvtlineaegtkhEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCA
dmpp_psesp 1 ..ynvti..eptge..VIEVEDGQTILQAALRQGVWLPFACGHGTCATCK
fer_halha 1 ............edygTMEVAEGEYILEAAEAQGYDWPFSCRAGACANCA
1frr 48 GKVVSGSVDESEGS..FLDDGQMEEGFV.LTCIAIPESD...LVIET.HK
1fxa 51 GKLVSGTVDQSDQS..FLDDDQIEAGYV.LTCVAYPTSD...VVIQT.HK
dmpp_psesp 45 VQVVEGEVDIGEASPFALMDIERDERKV.LACCAIPLSD...LVIEA.DV
fer_halha 39 SIVKEGEIDMDMQQ..ILSDEEVEEKDVRLTCIGSPAADEVKIVYNAKHL
1frr 91 EEe.....
1fxa 94 EEd.....
dmpp_psesp 90 DA......
fer_halha 87 DYlqnrvi
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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