1dlc - reference 1


Name                 endotoxin														

Number of sequences              4
Alignment Length                 638
Longest Sequence                 590
Shortest Sequence                567
Average Percent Identity         32
Maximum Percent Identity         40
Minimum Percent Identity         26

Sequence Name    SWISSPROT Accession
cr70_bacto           P17969         
cryx_bactk           P05517         
crys_bacta           P19415         
crys_bacti           P05519         

Family   cr70_bacto cryx_bactk crys_bacta crys_bacti


cr70_bacto   1  tvkdaVGTGISVVGQILGVVGVPFAGALt..sFYQSFLNAIWps....da
cryx_bactk   1  .sastVQTGINIAGRILGVLGVPFAGQLa..sFYSFLVGELWpr....gr
crys_bacta   1  ..eerLETGNTVADISLGLINFLYSNFVpgggFIVGLLELIWgf...igp
crys_bacti   1  .....VSTALKVAGAILKFVNPPAGTVL...tVLSAVLPILWptntptpe

cr70_bacto  45  dpWKAFMAQVEVLIDKKIEEYAKSKALAELQGLQNNFEDYVNALDSWKKA
cryx_bactk  44  dqWEIFLEHVEQLINQQITENARNTALARLQGLGDSFRAYQQSLEDWLEN
crys_bacta  46  sqWDIFLAQIEQLISQRIEEFARNQAISRLEGLSNLYKVYVRAFSDWEKD
crys_bacti  43  rvWNDFMTNTGNLIDQTVTAYVRTDANAKMTVVKDYLDQYTTKFNTWKRE

cr70_bacto  95  PVNLRSRrsqdrirelFSQAESHFRNSMPSFA.VSKFEVLFLPTYAQAAN
cryx_bactk  94  RDDARTR...svlytqYIALELDFLNAMPLFA.IRNQEVPLLMVYAQAAN
crys_bacta  96  PTNPALR...eemriqFNDMNSALITAIPLFR.VQNYEVALLSVYVQAAN
crys_bacti  93  PNNQSYR...tavitqFNLTSAKLRETAVYFSNLVGYELLLLPIYAQVAN

cr70_bacto 144  THLLLLKDAQVFGEEWGYSSEDIAEFYQRQLKLTQQYTDHCVNWYNVGLN
cryx_bactk 140  LHLLLLRDASLFGSEFGLTSQEIQRYYERQVERTRDYSDYCVEWYNTGLN
crys_bacta 142  LHLSILRDVSVFGERWGYDTATINNRYSDLTSLIHVYTNHCVDTYNQGLR
crys_bacti 140  FNLLLIRDGLINAQEWSLARSRGDQLYNTMVQYTKEYIAHSITWYNKGLD

cr70_bacto 194  SLRGSTYDAWVKFNRFRREMTLTVLDLIVLFPFYDVRLYskg.......v
cryx_bactk 190  SLRGTNAASWVRYNQFRRDLTLGVLDLVALFPSYDTRTYpin.......t
crys_bacta 192  RLEGRFLSDWIVYNRFRRQLTISVLDIVAFFPNYDIRTYpiq.......t
crys_bacti 190  VLRNKSNGQWITFNDYKREMTIQVLDILALFASYDPRRYpadkidntkls

cr70_bacto 237  ktELTRDIFTdpiftlnalq.......eygpTFSSIEn.siRKPHLFDYL
cryx_bactk 233  saQLTREVYTdaigatgvnmasmnwynnnapSFSAIEaaaiRSPHLLDFL
crys_bacta 235  atQLTREVYLdlpfinenlspaa.....sypTFSAAEsaiiRSPHLVDFL
crys_bacti 240  ktEFTREIYTalvesp............sskSIAALEaaltRDVHLFTWL

cr70_bacto 279  RGIEFHtrlrpgysgkdsfnYWSGNYVEtrpsigsndtitspfygdk.si
cryx_bactk 283  EQLTIFsas.srwsntrhmtYWRGHTIQsrpigggln...tsthgatnts
crys_bacta 280  NSFTIYtds......laryaYWGGHLVNsfrtgtttnlirsplygregnt
crys_bacti 278  KRVDFWtnt.....iyqdlrFLSANKIGfsytnssam.qesgiyg...ss

cr70_bacto 328  epiqklsfdgq...kVYRTiantdiaafpdg.kiyfgVTKVDFsqyddq.
cryx_bactk 329  inpvtlrfasr...dVYRTesyagvllwgiylepihgVPTVRFnftnpqn
crys_bacta 324  erpvtitasps..vpIFRTlsyitgldnsn...pvagIEGVEFq......
crys_bacti 319  gfgsnlthqiqlnsnVYKTsitdtss.......psnrVTKMDFykid...

cr70_bacto 373  knetstqtydskryngylgaqdsidqlp..pettdeplekAYSHQLNYAe
cryx_bactk 376  isdrgtanysqpyespglqlkdsetelp..petterpnyeSYSHRLSHIg
crys_bacta 363  .ntisrsiyrks......gpidsfselp..pqdasvspaiGYSHRLCHAt
crys_bacti 359  ...gtlasynsnitptpeglrttffgfstnentpnqptvnDYTHILSYIk

cr70_bacto 421  cflmq.drrgtiPFFTWTHRSVDFFNTIDAEKITQLPVVKAYALSSGASI
cryx_bactk 424  iilq...srvnvPVYSWTHRSADRTNTIGPNRITQIPMVKASELPQGTTV
crys_bacta 404  flerisgpriagTVFSWTHRSASPTNEVSPSRITQIPWVKAHTLASGASV
crys_bacti 406  tdvid..ynsnrVSFAWTHKIVDPNNQIYTDAITQVPAVKSNFLNATAKV

cr70_bacto 470  IEGPGFTGGNLLflkessnsi....akfkvtlnsaallQRYRVRIRYAST
cryx_bactk 471  VRGPGFTGGDILrrtntggf.....gpirvtvngp.ltQRYRIGFRYAST
crys_bacta 454  IKGPGFTGGDILtrnsmgel.....gtlrvtftgr.lpQSYYIRFRYASV
crys_bacti 454  IKGPGHTGGDLValtsngtlsgrmeiqcktsifnd.ptRSYGLRIRYAAN

cr70_bacto 516  TNLRLFVQNSNNDflviyinkt........mnidgDLTYQTFDFatsn..
cryx_bactk 515  VDFDFFVSRGGTTvnnfrflrt........mnsgdELKYGNFVRraft..
crys_bacta 498  ANRSGTFRYSQPPsygisfpkt........mdagePLTSRSFAHttlf..
crys_bacti 503  SPIVLNVSYVLQGvsrgttistestfsrpnniiptDLKYEEFRYkdpfda

cr70_bacto 556  .snmgfsgdtndfiigaes..fvsneKIYIDKIEFIPV
cryx_bactk 555  .tpftftqiqdiirtsiqg..lsgngEVYIDKIEIIPV
crys_bacta 538  .tpitfsraqeefdlyiqs.......GVYIDRIEFIPV
crys_bacti 553  ivpmrlssnq.litiaiqplnmtsnnQVIIDRIEIIPI

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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