1ag8 - reference 4


Name                 aldehyde dehydrogenase

Number of sequences              19
Alignment Length                 552
Longest Sequence                 491
Shortest Sequence                424
Average Percent Identity         31
Maximum Percent Identity         44
Minimum Percent Identity         18

Sequence Name    SWISSPROT Accession
ftdh_rat             P28037         
dha6_yeast           P54115         
dhag_human           P49189         
dha5_yeast           P47771         
dhab_atrho           P42757         
dha2_alceu           P46368         
roca_bacsu           P39634         
gabd_ecoli           P25526         
hpcc_ecoli           P42269         
alda_ecoli           P25553         
dhal_bacst           P42329         
mmsa_pseae           P28810         
dhal_ecoli           P23883         
dmpc_psesp           P19059         
dhal_psesp           P33008         
xylc_psepu           P43503         
dhal_pseol           P12693         
dhax_pea             P25795         
dha2_bacsu           P39616         

Family   ftdh_rat dha6_yeast dhag_human dha5_yeast dhab_atrho dha2_alceu roca_bacsu gabd_ecoli hpcc_ecoli alda_ecoli dhal_bacst
Family   mmsa_pseae dhal_ecoli dmpc_psesp dhal_psesp xylc_psepu dhal_pseol dhax_pea dha2_bacsu
Family   


ftdh_rat     1  ....nkltlqmpyqlfiggefvd.aegsktyntinptdg.svicqvslaq
dha6_yeast   1  itlpngltyeqptglfinnkfmkaqdg.ktypvedpste.ntvcevssat
dhag_human   1  ........................rsg..tekafepatg.rviatftcsg
dha5_yeast   1  ..............lfinnefcpssdg.ktietvnpatg.epitsfqaan
dhab_atrho   1  .............qlfidgewrepllk.nripiinpste.eiigdipaat
dha2_alceu   1  .vsnpykqq...yenyiggawvppagg.eyfesttpitg.kpftrvprsg
roca_bacsu   1  ..............lvingekie.td..rkiisinpank.eeiigyasta
gabd_ecoli   1  .....ndsnlfrqqalingewldanng.eaidvtnpang.dklgsvpkmg
hpcc_ecoli   1  .....................knvagn.dyflttnpatg.evladvasgg
alda_ecoli   1  ..........vqhpmyidgqfvt.wrgdawidvvnpate.avisripdgq
dhal_bacst   1  ....kvqteiktyfnyingnwvssvsn.nvepsinpanrhdivgyvqrst
mmsa_pseae   1  .............rhliagafve.glgaqripvsnpldn.stlaeiacas
dhal_ecoli   1  ..........ienrlfingeytaaaen.etfetvdpvtq.aplakiargk
dmpc_psesp   1  ...............fingafvgsasg.rtfedvnpang.qviarvheag
dhal_psesp   1  .....................hgvats.dylpvlnpatr.qpigqcpvas
xylc_psepu   1  ....etkeqpiwygkvfssnwve.arg.gvanvvdpsng.dilgitgvan
dhal_pseol   1  ................................mtipisl.aklnssadth
dhax_pea     1  ...............fingqwk..ang.ptvhsvnpstn.qviasvteat
dha2_bacsu   1  ..................................................

ftdh_rat    45  vsd.vdkAVAAAKEAFeng...lwgkinARDRGRLLYRLADVMEQHQEEL
dha6_yeast  49  ted.veyAIECADRAFhdt...ewatqdPRERGRLLSKLADELESQIDLV
dhag_human  24  eke.vnlAVQNAKAAFk.....iwsqksGMERCRILLEAARIIREREDEI
dha5_yeast  35  ekd.vdkAVKAARAAFdn....vwsktsSEQRGIYLSNLLKLIEEEQDTL
dhab_atrho  36  aed.vevAVVAARKAFkrnkgrdwaal.WSHRAKYLRAIAAKITEKKDHF
dha2_alceu  45  qqd.vdaALDAAHAAKa.....awartsTTERANILNRIADRIEANLKLL
roca_bacsu  33  dqelaekAMQAALQAFd.....swkkqrPEHRANILFKAAAILRRRKHEF
gabd_ecoli  44  ade.traAIDAANRALp.....awraltAKERATILRNWFNLMMEHQDDL
hpcc_ecoli  28  eae.inqAVATAKEAFp.....kwanlpMKERARLMRRLGDLIDQNVPEI
alda_ecoli  39  aed.arkAIDAAERAQp.....ewealpAIERASWLRKISAGIRERASEI
dhal_bacst  46  led.vneAVTAANEAQt.....swwkrsGVERGEYLYKAAHILEQCLQDI
mmsa_pseae  36  aeq.veqAVASARETFa.....swketpVSERARVMLRYQALLKEHHDEL
dhal_ecoli  39  svd.idrAMSAARGVFerg...dwslssPAKRKAVLNKLADLMEAHAEEL
dmpc_psesp  34  rae.vdaAVQAARAALkg....pwgkmsVSERAEILHRVADGITARFDEF
dhal_psesp  28  eeh.veqARAAAGDAFa.....vwrqvpYGKRCEQLQALAGILEAHLDEL
xylc_psepu  44  ged.vdaAVNAAKRAQk.....ewaaipFSERAAIVRKAAEKLKEREYEF
dhal_pseol  18  sal.evfNLQKVASSAr.....rgkf.gIAERIAALNLLKETIQRREPEI
dhax_pea    32  ldd.yeeGLRASSEAAk.....twrtvpAPKRGEIVRQIGDALRAKLDPL
dha2_bacsu   1  ............hkayfaa...ghtr.pLESRLNILRKLKQAVRTHEADL

ftdh_rat    91  ATIEALDRG..avytlal..ktHVGMSIQTFRYFAGWCdkiq.....gat
dha6_yeast  95  SSIEALDNG..ktlafka..rgDVTIAINCLRDAAAYAdkvn.....grt
dhag_human  68  ATMECINNG..ksi.fea..rlDIDISWQCLEYYAGLAasma.....geh
dha5_yeast  80  AALETLDAG..kpyhsna..kgDLAQILQLTRYFAGSAdkfdk....gat
dhab_atrho  84  VKLETLDSG..kprdeavldidDVATCFEYFEYFAGQAealdakqkapvt
dha2_alceu  89  AVAESIDNG..kpvrett..aaDLPLAVDHFRYFAGCIraqe.....ggi
roca_bacsu  78  SSYLVKEAG..kpwkea...daDTAEAIDFLEFYARQMlklke....gap
gabd_ecoli  88  ARLMTLEQG..kplaea...kgEISYAASFIEWFAEEGkriy.....gdt
hpcc_ecoli  72  AAMETADTG.lpihqtk...nvLIPRASHNFEFFAEVCqqmn.....gkt
alda_ecoli  83  SALIVEEGG..kiqqla...evEVAFTADYIDYMAEWArrye.....gei
dhal_bacst  90  AETMTREMG..ktlaea...kaETMRGVHILRYYAGEGarki.....gdv
mmsa_pseae  80  AKIVSSELG..ktfeda...kgDVWRGIEVVEHACNVPsllm.....get
dhal_ecoli  85  ALLETLDTG..kpirhsl..rdDIPGAARAIRWYAEAIdkvy.....gev
dmpc_psesp  79  LEAECLDTG..kpkslas..hiDIPRGAANFKVFADLLknvatea..fem
dhal_psesp  72  AQLLTHEQG..kp.......laDARGELAGAIAFCQCAgslpl....pev
xylc_psepu  88  ADWNVRECGairpkg.....lwEAGIAYEQMHQAAGLA.slpn....gtl
dhal_pseol  61  IAALAADFR..kpasevk..ltEIFPVLQEINHAKRNLkdwmk....prr
dhax_pea    76  GRLVALEMG..kilaeg...igEVQEIIDMCDYSVGLSrqln.....gsi
dha2_bacsu  35  IAALYQDLH..kseqeay..stEIGIVLEEISFVMKRLrkwsk....pkr

ftdh_rat   132  ipinqarpnrnltltkkEPVGVCGIVIPWNYPLMMLSWKTAACLAAgntv
dha6_yeast 136  intgd....gymnfttlEPIGVCGQIIPWNFPIMMLAWKIAPALAMgnvc
dhag_human 108  iqlpg....gsfgytrrEPLGVCVGIGAWNYPFQIASWKSAPALACgnam
dha5_yeast 122  ipltf....nkfaytlkVPFGVVAQIVPWNYPLAMACWKLQGALAAgntv
dhab_atrho 132  lpme.....rfkshvlrQPIGVVGLISPWNYPLLMDTWKIAPALAAgctt
dha2_alceu 130  seida....dtiayhfhEPLGVVGQIIPWNFPLLMATWKLAPALAAgncv
roca_bacsu 119  vksra....gevnqyhyEALGVGIVISPFNFPLAIMAGTAVAAIVTgnti
gabd_ecoli 128  ipghqa...dkrlivikQPIGVTAAITPWNFPAAMITRKAGPALAAgctm
hpcc_ecoli 113  ypvdd....kmlnytlvQPVGVCALVSPWNVPFMTATWKVAPCLALgita
alda_ecoli 123  iqsdrp...genillfkRALGVTTGILPWNFPFFLIARKMAPALLTgnti
dhal_bacst 130  ipssds...egllfttrVPLGVVGVISPWNFPVAIPIWKMAPALVYgntv
mmsa_pseae 120  venvar...nidtysitQPLGVCVGITPFNFPAMIPLWMFPLAIACgnaf
dhal_ecoli 126  attss....helamivrEPVGVIAAIVPWNFPLLLTCWKLGPALAAgnsv
dmpc_psesp 123  atpdgs...gainyavrRPKGVIGVISPWNLPLLLMTWKVGPALACgntv
dhal_psesp 109  vheqsa...trlsktvrEPLGVVVAIVPWNYPVSIAFVKPDRRVGCrkha
xylc_psepu 128  fpsavp...grmnlcqrVPVGVVGVIAPWNFPLFLAMRSVAPALALgnav
dhal_pseol 103  vraalsva.gtraglryEPKGVCLIIAPWNYPFNLSFGPLVSALAAgnsv
dhax_pea   116  ipserp...ehmmfevwNPLGIVGVITAFNFPCAVLGWNACIALVGgntv
dha2_bacsu  77  vktplthl.gsksiiipEPYGTVLVIAPWNYPLQLALSPLIGAIAAgntv

ftdh_rat   182  vikp.aqvtplTALKFAELTLKa....giPKGVVNILPGs.gsLVGQRLS
dha6_yeast 182  ilkp.aavtplNALYFASLCKKv....giPAGVVNIVPGp.grTVGAALT
dhag_human 154  vfkp.spftpvSALLLAEIYSEa....gvPPGLFNVVQG..gaATGQFLC
dha5_yeast 168  iikp.aentslSLLYFATLIKKa....gfPPGVVNIVPGy.gsLVGQALA
dhab_atrho 177  vlkp.selasvTCLEFGEVCNEv....glPPGVLNILTGl.gpDAGAPIV
dha2_alceu 176  vlkp.aeqtpaSILVLMEVIGDl.....lPPGVVNVINGf.glEAGKPLA
roca_bacsu 165  llkp.adaapvVAAKFVEVMEEa....glPNGVLNYIPGd.gaEIGDFLV
gabd_ecoli 175  vlkp.asqtpfSALALAELAIRa....gvPAGVFNVVTGs.agAVGNELT
hpcc_ecoli 159  vlkm.selsplTADRLGELALEa....giPAGVLNVVQGy.gaTAGDALV
alda_ecoli 170  vikp.seftpnNAIAFAKIVDEi....glPRGVFNLVLGr.geTVGQELA
dhal_bacst 177  vlkp.asetavTAAKVIECFHEa....gfPKGVVNMVCGs.gsVVGQGIA
mmsa_pseae 167  ilkp.seqvplTSVRLAELFLEa....gaPKGVLQVVHG..gkEQVDQLL
dhal_ecoli 172  ilkp.seksplSAIRLAGLAKEa....glPDGVLNVVTGf.ghEAGQALS
dmpc_psesp 170  vvkp.seetplTTALLGEVMQAa....gvPAGVYNVVHGfgpdSAGAFLT
dhal_psesp 156  dsqagadha.aDYLRIGELIRDa.....lPAGVINVLAG..ndDLGPWLT
xylc_psepu 175  ilkpdlqtavtGGALIAEIFSDa....gmPDGVLHVLPG..gaDVGESMV
dhal_pseol 152  vikp.seltphTATLIGSIVREa.....fSVDLVAVVEG..daAVSQELL
dhax_pea   163  vwkg.apttplITVAVTKLIAEvfernnlPGAIFTALCG..gaDIGHAIA
dha2_bacsu 126  vlkp.seytpaVSAILSKLISSv.....fPTDYVAMAEG..gpDVSTALL

ftdh_rat   226  DHPdVRKIGFTGSTEVGKHIMKSCA.....lsnvkkVSLELGGKSPLIIF
dha6_yeast 226  NDPrIRKLAFTGSTEVGKSVAVDSS.....esnlkkITLELGGKSAHLVF
dhag_human 197  QHPdVAKVSFTGSVPTGMKIMEMSA......kgikpVTLELGGKSPLIIF
dha5_yeast 212  SHMdIDKISFTGSTKVGGFVLEASG.....qsnlkdVTLECGGKSPALVF
dhab_atrho 221  SHPdIDKVAFTGSSATGSKIMASAA......qlvkpVTLELGGKSPVIMF
dha2_alceu 219  SSPrISKVAFTGETTTGRLIMQYAS......qnlipVTLELGGKSPNIFF
roca_bacsu 209  EHPkTRFVSFTGSRAVGCRIYERAAkvqpgqkwlkrVIAEMGGKDTVLVD
gabd_ecoli 219  SNPlVRKLSFTGSTEIGRQLMEQCA......kdikkVSLELGGNAPFIVF
hpcc_ecoli 203  RHHdVRAVSFTGGTATGRNIMKNAG........lkkYSMELGGKSPVLIF
alda_ecoli 214  GNPkVAMVSMTGSVSAGEKIMATAA......knitkVCLELGGKAPAIVM
dhal_bacst 221  NHPdIDGVTFTGSNTVGKQVGRAAF.....ergak.YQLEMGGKNPVIVA
mmsa_pseae 210  KHPqVKAVSFVGSVAVGQYVYHTGT......ahnkrVQSFAGAKNHMVIM
dhal_ecoli 216  RHNdIDAIAFTGSTRTGKQLLKDAG.....dsnmkrVWLEAGGKSANIVF
dmpc_psesp 215  EHPdVNAITFTGETRTGEAIMRAAA......kgvrpVSFELGGKNAGIVF
dhal_psesp 198  GHAdVAKISFTGSSVTGRHVARSAA......adlkrLTLELGGNDAAVVM
xylc_psepu 219  ANSgINMISFTGSTQVGRLIGEKCG......rmlkkVALELGGNNVHIVL
dhal_pseol 194  ALP.FDHIFFTGSPRVGKLVMEAAS......ktlasVTLELGGKSPTIIG
dhax_pea   210  KDTrIPLVSFTGSSKVGALVQQTVS......qrfgkTLLELSGNNAIIVM
dha2_bacsu 168  QQP.FDYIFFTGSVAVGKIVMEAAA......kqlipVTLELGGKSPCIVH

ftdh_rat   271  ADc......dlnkAVQMGMSSVFFNKGENCIAAGRLFVe...esIHNQFV
dha6_yeast 271  DDa......nikkTLPNLVNGIFKNAGQICSSGSRIYVq...egIYDELL
dhag_human 241  SDc......dmnnAVKGALMANFLTQGQVCCNGTRVFVq...keILDKFT
dha5_yeast 257  EDa......dldkAIDWIAAGIFYNSGQNCTANSRVYVq...ssIYDKFV
dhab_atrho 265  EDi......dietAVEWTLFGVFWTNGQICSATSRLLVh...esIAAEFV
dha2_alceu 263  EDvlaaddaffdkALEG.FAMFALNQGEVCTCPSRALIq...esIYDRFM
roca_bacsu 259  KDa......dldlAASSIVYSAFGYSGQKCSAGSRAVIh...qdVYDEVV
gabd_ecoli 263  DDa......dldkAVEGALASKFRNAGQTCVCANRLYVq...dgVYDRFA
hpcc_ecoli 245  EDa......dierALDAALFTIFSINGERCTAGSRIFIq...qsIYPEFV
alda_ecoli 258  DDa......dlelAVKAIVDSRVINSGQVCNCAERVYVq...kgIYDQFV
dhal_bacst 265  KDa......dldlAVEGTISGGLRSTGQKCTATSRVFIe...reVYEPFK
mmsa_pseae 254  PDa......dkaqVISNLVGASVGAAGQRCMAISVAVLvgaareWIPEIR
dhal_ecoli 261  ADc.....pdlqqAASATAAGIFYNQGQVCIAGTRLLLe...esIADEFL
dmpc_psesp 259  ADc......dldkAIEGSMRSVFANGGQVCLGTERLYVe...rpIFDEFV
dhal_psesp 242  ADs......lsdaVVERVFWSAFTNAGQICMATKRLYIh...esIYEAFR
xylc_psepu 263  PDa......dlegAVSCAAWGTFLHQGQVCMAAGRHLVh...rdVAQQYA
dhal_pseol 237  PTa......nlpkAARNIVWGKFSNNGQTCIAPDHVFVh...rcIAQKFN
dhax_pea   254  DDa......ditlAVRSIFFAAVGTAGQRCTTCRRLYLh...esVYANVL
dha2_bacsu 211  KDa......diqlAAKRIVFGKFTNAGQTCIAPDYLFVh...edIKTKLT

ftdh_rat   312  QKVveevek.mkig...npler...dtnhgpQNHEAHLRKLVEYcqrgvk
dha6_yeast 312  AAFkayleteikvg...npfdk...anfqgaITNRQQFDTIMNYidigkk
dhag_human 282  EEVvkqtqr.ikig...dplle...dtrmgpLINRPHLERVLGFvkvake
dha5_yeast 298  EKFketakkewdvagkfdpfde...kcivgpVISSTQYDRIKSYiergkr
dhab_atrho 306  DRMvkwtkn.ikis...dpfee...gcrlgpVISKGQYDKIMKFistaks
dha2_alceu 309  ERAlkrvaa.irqg...hpldt...gtmigaQASAEQLEKILSYidlgrk
roca_bacsu 300  EKAvaltkt.ltvg...npedp...dtymgpVIHEASYNKVMKYieigks
gabd_ecoli 304  EKLqqavsk.lhig...dgldn...gvtigpLIDEKAVAKVEEHiadale
hpcc_ecoli 286  .KFaeranr.vrvg...dptdp...ntqvgaLISQQHWEKVSGYirlgie
alda_ecoli 299  NRLgeamqa.vqfg...npaer..ndiamgpLINAAALERVEQKvarave
dhal_bacst 306  AKLlervkq.lkig...nglda...etwmgpCASESQFHTVLSYiekgks
mmsa_pseae 298  DALakvr.....pg....pwdd..sgasygpVINPQAKARIERLigqgve
dhal_ecoli 303  ALLkqqaqn.wqpg...hpldp...attmgtLIDCAHADSVHSFireges
dmpc_psesp 300  ARLkagaes.lvig...tpddp...qanfgpLISLQHREKVLSYyqkavd
dhal_psesp 283  DKLvayaqn.vvig...dgsqp...gvtmgpLQNAKQFAKVMSLidavrq
xylc_psepu 304  EKLalrakn.lvvg...dpnsd...qvhlgpLINEKQVVRVHALvesaqr
dhal_pseol 278  EILvkeivr..vyg...kdfaaqrrsadycrIVNDQHFNRINKLltdaka
dhax_pea   295  EQLtalykq.vkig...nplee...gtlvgpLHTRSAVENFKNGisaiks
dha2_bacsu 252  EEMkraire..fyg...pqper...npqygkIVSERHYQRLLSFl....n

ftdh_rat   355  egatlvcgg.......nqvprpgffFQPTVFTDVEDHmy.iAKEESFGPI
dha6_yeast 356  egakiltgg.......ekvgdkgyfIRPTVFYDVNEDmr.iVKEEIFGPV
dhag_human 325  qgakvlcgg.diyvpedpklkdgyyMRPCVLTNCRDDmt.cVKEEIFGPV
dha5_yeast 345  ee.kldmfq...tsefpiggakgyfIPPTIFTDVPQTsk.lLQDEIFGPV
dhab_atrho 349  egatilcgg.....srpehlkkgyyIEPTIITDITTSmq.iWKEEVFGPV
dha2_alceu 352  egaqcltgg..ernvldgdlaggyyVKPTVFAG.HNKmr.iFQEEIFGPV
roca_bacsu 343  eg.kllagg.......egddskgyfIQPTIFADVDENar.lMQEEIFGPV
gabd_ecoli 347  kgarvvcgg.......kaherggnfFQPTILVDVPANak.vSKEETFGPL
hpcc_ecoli 328  egatllaggpdkpsdlpahlkggnfLRPTVLADVDNRmr.vAQEEIFGPV
alda_ecoli 343  egarvafgg.......kavegkgyyYPPTLLLDVRQEms.iMHEETFGPV
dhal_bacst 349  egakliygg...nrclegelangffVEPTIFEDVDLQmt.iAREEIFGPV
mmsa_pseae 337  egaqllldg...rgykvegypdgnwVGPTLFAGVRPDma.iYREEVFGPV
dhal_ecoli 346  kg.qllldg........rnaglaaaIGPTIFVDVDPNas.lSREEIFGPV
dmpc_psesp 343  egatvvtgg..gvpempaelaggawVQPTIWTGLADGaa.vVTEEIFGPC
dhal_psesp 326  rggrliecg........qmrggdgyFLPITFVDLPDEsapeVVEEAFGPL
xylc_psepu 347  agaqvlagg..........tyqdryYQATVIMDVKPEme.vFKSEIFGPV
dhal_pseol 323  kgakilqgg........qvdaterlVVPTVLSNVTAAmd.iNHEEIFGPL
dhax_pea   338  qggkivtgg.......svlesegnfVVPTIV.EISADaa.vVKEELFAPV
dha2_bacsu 290  dgipl.tgg........qsdpnhhkIAPTILEQVRDDsp.vMQEEIFGPI

ftdh_rat   397  MIISRFadgdvdAVLSRANATEFGLASGVFTRDINKALYVsdklqagtvf
dha6_yeast 398  VTVAKFkt..leEGVEMANSSEFGLGSGIETESLSTGLKVakmlkagtvw
dhag_human 373  MSILSFdt..eaEVLERANDTTFGLAAGVFTRDIQRAHRVvaelqagtcf
dha5_yeast 390  VVVSKFtn..ydDALKLANDTCYGLASAVFTKDVKKAHMFardikagtvw
dhab_atrho 393  ICVKTFkt..edEAIELANDTEYGLAGAVFSKDLERCERVtkalevgavw
dha2_alceu 398  VSVTTFkd..eeEALAIANDTLYGLGAGVWTRDGARAFRMgrgiqagrvw
roca_bacsu 384  VAICKArd..fdHMLEIANNTEYGLTGALLTKNRAHIERAredfhvgnly
gabd_ecoli 389  APLFRFkd..eaDVIAQANDTEFGLAAYFYARDLSRVFRVgealeygivg
hpcc_ecoli 377  ACLLPFkd..eaEALRLANDVEYGLASYIWTQDVSKVLRLargieagmvf
alda_ecoli 385  LPVVAFdt..leDAISMANDSDYGLTSSIYTQNLNVAMKAikglkfgety
dhal_bacst 395  LALIQVds..ieEAIKLANDTEYGLSASIYTKNIGNALEFikdieaglik
mmsa_pseae 383  LCLAEVds..leQAIRLINESPYGNGTSIFTSSGAAARTFqhhievgqvg
dhal_ecoli 386  LVVTRFts..eeQALQLANDSQYGLGAAVWTRDLSRAHRMsrrlkagsvf
dmpc_psesp 390  CHIRPFdr..eeEAVELANSLPYGLAATIWTENTSRAHRVagqleagivw
dhal_psesp 368  LPLLKFrd..vdEVIERVNAARTGWLAASGVVIGRSAHGLqqp.strsvw
xylc_psepu 386  APITVFds..ieEAIELANCSEYGLAASIHTRALATGLDIakrlntgmvh
dhal_pseol 364  LPIIEYdd..idSVIKRVNDGDKPLALYVFSEDKQFVNNIvartssgsvg
dhax_pea   379  LYVMKFkd..leEAIALNNSVPQGLSSSIFTQKPSTIFKWigpsgsdcgi
dha2_bacsu 330  LPLFTYrn..igEVIEKVQSRPKPLALYLFTTNKEIERAVlgnlsfgggc

ftdh_rat   447  in..tynktd..vaaPFGGFKqsg..fgkdlgeaaLNEYLRIKTVt....
dha6_yeast 446  in..tyndfd..srvPFGGVKqsg..ygremgeevYHAYTEVKAVrikl.
dhag_human 421  in..nynvsp..velPFGGYKksg..fgrengrvtIEYYSQLKTVcvemg
dha5_yeast 438  in..ssnded..vtvPFGGFKmsg..igrelgqsgVDTYLQTKAVhinls
dhab_atrho 441  vn..csqpcf..vhaPWGGVKrsg..fgrelgewgIENYLNIKQVtsdis
dha2_alceu 446  tn..cyhayp..ahaAFGGYKqsg..igrenhrmmLDHYQQTKNLlvsys
roca_bacsu 432  fnrgctgaiv..gyqPFGGFNmsgt.dskaggpdyLILHMQAKTTs....
gabd_ecoli 437  in..tgiisn..evaPFGGIKasg..lgregskygIEDYLEIKYMcigl.
hpcc_ecoli 425  vn..tqfvrd..lrhAFGGVKpr...tgregggysFEVFAEMKKNvcip.
alda_ecoli 433  in..renfea..mqgFHAGWRksgi.ggad.gkhgLHEYLQTQVVylq..
dhal_bacst 443  vn..aetagve.fqaPFGGMKqsss.hsreqgqaaIEFFTSIKTVfvk..
mmsa_pseae 431  in..ipipvpl.pffSFTGWKgsfygdlhaygkqgVRFYTETKTVtarwf
dhal_ecoli 434  vn..nyndgd..mtvPFGGYKqsg..ngrdkslhaLEKFTELKTIwisle
dmpc_psesp 438  vn..swflrd..lrtAFGGSKqsg..igreggvhsLEFYTELKNIcvkl.
dhal_psesp 415  ....sttgcdh.avySFGGMKasg..ygaesglegLLEFTTQKTViiq..
xylc_psepu 434  in..dqpince.phvPFGGMGasgs.ggrfggpasIEEFTQSQWIsmvek
dhal_pseol 412  vn..lsvvhflhpnlPFGGVNnsg..igsahgvygFRAFSHEKPVli...
dhax_pea   427  vn.vniptngaeiggAFGGEKatg..ggreagsdsWKQYMRRSTCtinyg
dha2_bacsu 378  vn..dtlmhvatpylPFGGVGesg..igsyhgfdsFNTFTHKKSVvkqtn

ftdh_rat   487  ..
dha6_yeast 489  ..
dhag_human 465  dv
dha5_yeast 482  ld
dhab_atrho 485  de
dha2_alceu 490  pn
roca_bacsu 475  ..
gabd_ecoli 480  ..
hpcc_ecoli 467  ..
alda_ecoli 475  ..
dhal_bacst 487  ..
mmsa_pseae 478  ds
dhal_ecoli 478  ..
dmpc_psesp 481  ..
dhal_psesp 456  ..
xylc_psepu 480  pa
dhal_pseol 455  ..
dhax_pea   474  se
dha2_bacsu 424  r.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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