1r69


MSF format
Number of sequences              23
Alignment Length                 91
Longest Sequence                 70
Shortest Sequence                56

Repartition                      H5/H5/H4/H9
Average Percent Identity         19
Maximum Percent Identity         64
Minimum Percent Identity         1

1r69_2            1  ........sissRVkskriql....GLNQAELAQKV.........gTTQQ
rcro_bp434        1  ........tlseRLkkrrial....KMTQTELATKA.........gVKQQ
rpc2_bpp22        1  .........mgeRIrarrkkl....KIRQAALGKMV.........gVSNV
1lmb3_2           1  p.ltqeqledarRLkaiyekkknelGLSQESVADKM.........gMGQS
sinr_bacli        1  ........migqRIkqyrkek....GYSLSELAEKA.........gVAKS
1au7A_2           1  ..gmraleqfanEFkvrrikl....GYTQTNVGEALaavh...gseFSQT
ipou_drome        1  ....releafaeRFkqrrikl....GVTQADVGKALanlklpgvgaVSQS
oct3_mouse        1  ....keleqfakLLkqkritl....GYTQADVGLTLgvlf...gkvFSQT
hm18_caeel        1  ...mneleafaqTFkkqrikf....GFTQGDVGVALgkry...gtdFSQT
po61_mouse        1  ...leeirefakNFkirrlsl....GLTQTQVGQALtate...gpaYSQS
1neq_1            1  csnekardwhraDViaglkkr....KLSLSALSRQF.........gYAPT
nlp_ecoli         1  .......dwhpaDIiaglrkk....GTSMAAESRRN.........gLSSS
dbne_bpd10        1  ...tnrqdwhraDIvaelrkr....NMSLAELGRSN.........hLSSS
nlp_haein         1  ..ktaeqdwhraDIlaelkkn....GWSLRSLAKEG.........qVSYN
1a04A_2           1  erdvnqltprerDIlkliaq.....GLPNKMIARRL.........dITES
ygek_ecoli_2      1  ....nqltnresEIlqliad.....GKTNKEIANFL.........qLSRK
yz18_myctu_2      1  argwgsltpterDVvrlvse.....GLSNKDIAKRL.........fVSPR
moar_kleae_2      1  ......ltakerEIvgmvre.....GASNKLIARQL.........dISLS
yexn_aersa_2      1  ....drltrrerQVaelllq.....GLDTEAIAAAL.........gIGNG
dctr_rhoca_2      1  .....slsareaEVmalmle.....GLMNKQIAERL.........gIAMR
fixj_azoca_2      1  .kriaglsqrerQVleclvn.....GLANKTIAYDL.........gISPR
gere_bacsu_2      1  .....sltkrerEVfellvq.....DKTTKEIASEL.........fISEK
uhpa_salty_2      1  ....dpltkrerQVaeklaq.....GMAVKEIAAEL.........gLSPK

1r69_2           30  SIEQlengktkr...prflpelasalgvsvdwllngt....
rcro_bp434       30  SIQLieagvtkr...prflfeiamalncdpvwlqyg.....
rpc2_bpp22       29  AISQwersete..pngenllalskalqcspdyllkg.....
1lmb3_2          41  GVGAlfngina..lnaynaallakilkvsveefsps.....
sinr_bacli       30  YLSSiernlqt.npsiqflekvsavldvsvhtlln......
1au7A_2          42  TICRfenlqls....fknacklkailskwleeaeqkrrtti
ipou_drome       43  TICRfesltls....hnnmialkpilqawleeae.......
oct3_mouse       40  TICRfealqls....lknmcklrpllekwveeadn......
hm18_caeel       41  TISRfealnls....fknmcklrpllkewladve.......
po61_mouse       41  AICRfekldit....pksaqklkpvlekwlmeae.......
1neq_1           38  TLANalerhw.....pkgeqiianaletkpeviwpsr....
nlp_ecoli        31  TLANalsrpw.....pkgemiiakalgtdpwviwpsryhdp
dbne_bpd10       35  TLKNaldkry.....pkaekiiadalgmtpqdiwpsry...
nlp_haein        36  TLKTvldksy.....pkmerlvanaigvppeviwagrfaer
1a04A_2          37  TVKVhvkhmlkkmklksrveaavwvhqerif..........
ygek_ecoli_2     33  TVEThrlnimkkldvhsgieliktalrmgvcti........
yz18_myctu_2     37  TVQThlthvyaklglasrvqlvdeaarrgsps.........
moar_kleae_2     31  TVKThlrnifaktevvnrtelvsrtwmpaaqrtlhl.....
yexn_aersa_2     33  TVKNhrkhlygklrlgsraelfnlflnhli...........
dctr_rhoca_2     32  TVEVhrsrvlakmgarniadlarmt................
fixj_azoca_2     36  TVEVyranvmtkmkaaslpelvrmallagvapaddatpt..
gere_bacsu_2     32  TVRNhisnamqklgvkgrsqavvellrmgelel........
uhpa_salty_2     33  TVHVhranlleklgvsndvelahrmfdgw............

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

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