1ldg - reference 1


Name                 lactate dehydrogenase

Number of sequences              4
Alignment Length                 326
Longest Sequence                 315
Shortest Sequence                303
Average Percent Identity         27
Maximum Percent Identity         30
Minimum Percent Identity         23

Sequence Name    SWISSPROT Accession
1ldg                 Q27743         
1hyhA                P14295         
1hlpB                Q07841         
1lldA                P19869         

Family   1ldg 1hyhA 1hlpB 1lldA


1ldg         1  apkaKIVLVGs.GMIGGVMATLIVQKNLG.dVVLFDI..vknmphgkaLD
1hyhA        1  ..arKIGIIGl.GNVGAAVAHGLIAQGVAddYVFIDA..neakvkadqID
1hlpB        1  ...tKVSVVGaaGTVGAAAGYNIALRDIAdeVVFVDIpdkeddtvgqaAD
1lldA        1  ..ptKLAVIGa.GAVGSTLAFAAAQRGIAreIVLEDI..akerveaevLD

1ldg        47  TSHTNVmaysnckvsgsntYDDLAGSDVVIVTAGftkapgksdkewnRLD
1hyhA       46  FQDAMAnleahgnivi.ndWAALADADVVISTLGniklqqdn.ptgdRFA
1hlpB       48  TNHGIA.ydsntrvrq.ggYEDTAGSDVVVITAGiprqpgqt.....RID
1lldA       46  MQHGSSfyptv.sidgsddPEICRDADMVVITAGprqkpgqs.....RLE

1ldg        97  LLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKI
1hyhA       94  ELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITALFQHVTGFPAHKV
1hlpB       91  LAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQV
1lldA       90  LVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQI

1ldg       147  IGLGGVLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGG
1hyhA      144  IGTGTLLDTARMQRAVGEAFDLDPRSVSGYNLGEHGNSQFVAWSTVRVMG
1hlpB      141  IGFGGRLDSARFRYVLSEEFDAPVQNVEGTILGEHGDAQVPVFSKVRVDG
1lldA      140  FGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGG

1ldg       197  iplqefinnk..lisdae.lEAIFDRTVNTALEIVNLHASPYVAPAAAII
1hyhA      194  qpivtla.....dagdid.lAAIEEEARKGGFTVLNGKGYTSYGVATSAI
1hlpB      191  tdp.........efsgde.kEQLLGDLQESAMDVIERKGATEWGPARGVA
1lldA      190  vpmsdwtplpghdpldadkrEEIHQEVKNAAYKIINGKGATNYAIGMSGV

1ldg       244  EMAESYLKDLKKVLICStllegqyghsdifgGTPVVLGANGVEQVIELQL
1hyhA      238  RIAKAVMADAHAELVVSnrrddm....gmylSYPAIIGRDGVLAETTLDL
1hlpB      231  HMVEAILHDTGEVLPASvklegefghedtafGVPVRLGSNGVEEIVEWDL
1lldA      240  DIIEAVLHDTNRILPVSsmlkdfhgisdicmSVPTLLNRQGVNNTINTPV

1ldg       294  NSEEKAKFDEAIaetkrmkala....
1hyhA      284  TTDEQEKLLQSRdyiqqrfdeivdtl
1hlpB      281  DDYEQDLMADAAeklsdqydkis...
1lldA      290  SDKELAALKRSAetlketaaqfgf..

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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