1uky - reference 3


Name                 uridyl kin										

Number of sequences              25
Alignment Length                 266
Longest Sequence                 220
Shortest Sequence                167
Average Percent Identity         21
Maximum Percent Identity         70
Minimum Percent Identity         8

Sequence Name    SWISSPROT Accession
1uky                 P15700         
kcy_dicdi            P20425         
kad1_pig             P00571         
kad_schma            P25824         
kad_miclu            P33107         
1dvrA                P07170         
kad_mycca            P10251         
kad_bacsu            P16304         
kadc_maize           P43188         
kad_giala            P49982         
kad_salty            P37407         
kad_lacla            P27143         
kad_parde            P10772         
1gky                 P15454         
kgua_bovin           P46195         
kgua_ecoli           P24234         
kgua_mycge           P47353         
dlg1_drome           P31007         
em55_human           Q00013         
va57_vaccv           Q01230         
1bif                 P25114         
f26l_human           P16118         
f26h_bovin           P26285         
f26_yeast            P32604         
6p21_yeast           P40433         

Family   1uky kcy_dicdi kad1_pig kad_schma kad_miclu 1dvrA kad_mycca kad_bacsu kadc_maize kad_giala kad_salty kad_lacla kad_parde
Family   1gky kgua_bovin kgua_ecoli kgua_mycge dlg1_drome em55_human va57_vaccv
Family   1bif f26l_human f26h_bovin f26_yeast 6p21_yeast


1uky         1  pafspdqvsvIFVLGGPGAGKGTQCEKLVkdy.....sfVHLSAGDLLRA
kcy_dicdi    1  meks..kpnvVFVLGGPGSGKGTQCANIVrdf.....gwVHLSAGDLLRQ
kad1_pig     1  ......kskiIFVVGGPGSGKGTQCEKIVqky.....gyTHLSTGDLLRA
kad_schma    1  ......kakvIFVLGGPGSGKGTQCEKLVqkf.....hfNHLSSGDLLRA
kad_miclu    1  .........rMLLMGPPGSGKGTQATRIAdkl.....giVPISTGDIFRH
1dvrA        1  ....ssesirMVLIGPPGAGKGTQAPNLQerf.....haAHLATGDMLRS
kad_mycca    1  ..........IMLLGAPGCGKGTQAEQLVnkl.....nfIQVSTGDLMRK
kad_bacsu    1  ..........LVLMGLPGAGKGTQGERIVedy.....giPHISTGDMFRA
kadc_maize   1  ..........VMISGAPASGKGTQCELIKtky.....qlAHISAGDLLRA
kad_giala    1  .rkk..nlfkLVLLGAPGAGKGTQAKHLVsky.....slKHISPGNLLRE
kad_salty    1  ..........IILLGAPGAGKGTQAQFIMeky.....giPQISTGDMLRA
kad_lacla    1  ..........LLIMGLPGAGKGTQAEFIVkny.....gvNHISTGDMFRA
kad_parde    1  ..........IILLGPPGAGKGTQARRLIder.....glVQLSTGDMLRE
1gky         1  .......srpIVISGPSGTGKSTLLKKLFaey....pdsFGFSVSSTTRT
kgua_bovin   1  ........rpVVLSGPSGAGKSTLLKKLLqeh....gsiFGFSVSHTTRD
kgua_ecoli   1  ...........IVSAPSGAGKSSLIQALLktq...plydTQVSVSHTTRQ
kgua_mycge   1  ........riFVITGPSGVGKSTLVKALLdhf....keqLFYSISATTRK
dlg1_drome   1  .......trpVIILGPL...KDRINDDLIsey....pdkFGSCVPHTTRP
em55_human   1  .......rktLVLIGASGVGRSHIKNALLsqn....pekFVYPVPYTTRP
va57_vaccv   1  ........ksIILSGPSGLGKTAIAKRLWe........yFGFVVSHTTRF
1bif         1  ......cptlIVMVGLPARGKTYISKKLTrylnfigvptREFNVGQYRRD
f26l_human   1  .......ptmVIMVGLPARGKTYISTKLTrylnwigtptKVFNLGQYRRE
f26h_bovin   1  .......ptlIVMIGLPARGKTYVSKKLTrylnwigvptKVFNLGVYRRQ
f26_yeast    1  ..........VIMVGLPARGKSFISQKIIrylswlsikaKCFNVGNYRRD
6p21_yeast   1  .........vIVMVGLPATGKSFITNKLSrflnyslyycKVFNVGNTRRK

1uky        46  eqgra.......gsqygelikNCIKEGQ........ivpqeITLALLRNa
kcy_dicdi   44  eqqs........gskdgemiaTMIKNGE........ivpsiVTVKLLKNa
kad1_pig    40  evss........gsargkmlsEIMEKGQ........lvpleTVLDMLRDa
kad_schma   40  evqs........gspkgkelkAMMERGE........lvpleVVLALLKEa
kad_miclu   37  nvks........mtplgveakRYIDNGD........fvpdeVTNRMVADr
1dvrA       42  qiak........gtqlgleakKIMDQGG........lvsddIMVNMIKDe
kad_mycca   36  eisl........nttlglkcqEYMNAGK........yvpdqIVNQIVNQf
kad_bacsu   36  amke........etplgleakSYIDKGE........lvpdeVTIGIVKEr
kadc_maize  36  eiaa........gsengkrakEFMEKGQ........lvpdeIVVNMVKEr
kad_giala   43  emnr........nspitaqikDYVSKGQ........lvpdsIVIKLIENh
kad_salty   36  avks........gselgkqakDIMDAGK........lvtdeLVIALVKEr
kad_lacla   36  amkn........etemgklakSFIDKGE........lvpdeVTNGIVKEr
kad_parde   36  arss........gtemgkrvaEVMDRGE........lvtdeIVIGLIREk
1gky        40  pragevngkdynfvs.vdefkSMIKNNEfiewaqfsgnyygSTVASVKQ.
kgua_bovin  39  prpgeengkdyyfvt.revmqRDIAAGDfiehaefsgnlygTSKAAVRA.
kgua_ecoli  37  prpgevhgehyffvn.hdefkEMISRDAflehaevfgnyygTSREAIEQ.
kgua_mycge  39  krisekegidyffkd.kdefeNLIKQDAfiewacynnhyygTLKSQAEQ.
dlg1_drome  37  kreyevdgrdyhfvssreqmeRDIQNHLfieagqyndnlygTSVASVRE.
em55_human  40  prkseedgkeyhfis.teemtRNISANEflefgsyqgnmfgTKFETVHQ.
va57_vaccv  35  prpmeregvdyhyvn.reaiwKGIAAGNflehteflgniygTSKTAVNT.
1bif        45  mvk.............tyksfEFFLPDN....eeglkirkqCALAALND.
f26l_human  44  av..............syknyEFFLPDN....mealqirkqCALAALKD.
f26h_bovin  44  avk.............syksyDFFRHDN....eeamkirkqCALVALKD.
f26_yeast   41  vsg............nvpmdaEFFNFEN....tdnfklrelAAQNAIKD.
6p21_yeast  42  fak.........ehglkdqdsKFFEPKN....adstrlrdkWAMDTLDE.

1uky        81  isdnvkank.hkFLIDgfprKMDQAISFErdives....kFILFFDc...
kcy_dicdi   78  idanqgk....nFLVDgfprNEENNNSWEenmkdfvdt.kFVLFFDc...
kad1_pig    74  mvakvdtsk..gFLIDgyprEVKQGEEFErkigqp....tLLLYVDa...
kad_schma   74  minwltkiv..iSLSIryprELDQGIKFEkevcpc....lCVINFDv...
kad_miclu   71  iaqadae...hgFLLDgyprTKGQVEALDamlaeagqslsAVVELEv...
1dvrA       76  ltnnpack..ngFILVgfprTIPQAEKLDqmlkeqgtpleKAIELKv...
kad_mycca   70  lqynnd.....kLIFDgyprTLEQAKLLEkmldlynkkidYVFYIDv...
kad_bacsu   70  lgkddcer...gFLLDgfprTVAQAEALEeileeygkpidYVINIEv...
kadc_maize  70  lrqpdaqen..gWLLDgyprSYSQAMALEtleirp....dTFILLDv...
kad_giala   77  iatigdsn....WLLDgfprSESQAAALRaspdlfp...tHIVELKv...
kad_salty   70  iaqedcrn...gFLLDgfprTIPQADAMKeagivv....dYVLEFDv...
kad_lacla   70  laqddikas..gFLLDgyprTIDQAHALDtmleelgikldAVVNIVv...
kad_parde   70  lgqggk.....gFIFDgfprTLAQADALQalmaemdqridAVIEMRv...
1gky        88  vsks.....gktCILD...iDMQGVKSVKaipeln....aRFLFIAp..p
kgua_bovin  87  vqam.....nriCVLD...vDLQGVRNIKktdlrp.....IYIFVQp..p
kgua_ecoli  85  vlat.....gvdVFLD...iDWQGAQQIRqkmpha.....RSIFILp..p
kgua_mycge  87  aiks.....ginLMLE...iEYQGALQVKskyphn....vVLIFIKp..p
dlg1_drome  86  vaek.....gkhCILD...vSGNAIKRLQvaqlyp.....VAVFIKp..k
em55_human  88  ihkq.....nkiAILD...iEPQTLKIVRtaelsp.....FIVFIAp..t
va57_vaccv  83  aain.....nriCVMD...lNIDGVRSLKntylmp.....YSVYIRp..t
1bif        77  vrkflseegghvAVFDatntTRERRAMIFn.fgeqng..yKTFFVEsicv
f26l_human  75  vhnylsheeghvAVFDatntTRERRSLILq.fakehg..yKVFFIEsicn
f26h_bovin  76  vkaylteesgqiAVFDatntTRERRDLILn.faeens..fKVFFVEsvcd
f26_yeast   74  ivnfftkedgsvAVFDatnsTRKRRKWLKd.iceknn..iQPMFLEswsn
6p21_yeast  78  lldyllegsgsvGIFDatntSRERRKNVLarirkrsph.lKVLFLEsvcs

1uky       123  pEDIMLERLLERgkts............................grsddn
kcy_dicdi  120  pEEVMTQRLLKRgess............................grsddn
kad1_pig   115  gPETMTKRLLKRgets............................grvddn
kad_schma  115  sEEVMRKRLLKRaets............................nrvddn
kad_miclu  115  pDEELVERLLKRaeie............................graddt
1dvrA      121  dDELLVARITGRlihpasgrsyhkifnppkedmkddvtg.ealvqisddn
kad_mycca  112  nEQILIKRITNRlvcplckasfnletrkpkqeglcdfdn.tklvkrsdds
kad_bacsu  114  dKDVLMERLTGRricsvcgttyhlvfnppktpgicdkdg.gelyqraddn
kadc_maize 111  pDELLVERVVGRrldpvtgkiyhlkysppeneeiasrlt.....qrfddt
kad_giala  117  dQEAVVQRLGGRrfdpitgntyhiiydppppdiadrvv......vrtddr
kad_salty  110  pDELIVDRIVGRrvhaasgrvyhvkfnppkvegkddvtg.edlttrkddq
kad_lacla  115  nPNILVDRLSGRyicrncgatyhkifnptkvegtcdvcgshdlyqraddv
kad_parde  112  dDAALVSRISGRfthgncgevygdvtkptkepgkcdvcgstdlrrraddn
1gky       124  sVEDLKKRLEGR..................................gtet
kgua_bovin 122  sLDVLEQRLRQR..................................ntet
kgua_ecoli 120  sKIELDRRLRGR..................................gqds
kgua_mycge 123  sMQELLKRLKKR..................................nded
dlg1_drome 121  sVDSVMEMNRRM.....................................t
em55_human 123  dQGTQTEALQQL......................................
va57_vaccv 118  sLKMVETKLRCR................................nteand
1bif       124  dPEVIAANIVQVklgspdyvn.......................rdsdea
f26l_human 122  dPGIIAENIRQVklgspdyid.......................cdrekv
f26h_bovin 123  dPDVIAANILEVkvsspdype.......................rnrenv
f26_yeast  121  dHELIINNAKDIgstspdyen.......................sephva
6p21_yeast 127  dHALVQKNI.RLklfgpdykg.......................kdpess

1uky       145  iesIKKRFNTFKETSMPVieyfet.............kskVVRVRcdr.S
kcy_dicdi  142  iesIKKRFNTFNVQTKLVidhynk.............fdkVKIIPanr.D
kad1_pig   137  eetIKKRLETYYKATEPViafyek.............rgiVRKVNaeg.S
kad_schma  137  eetIVKRFRTFNELTKPViehykq.............qnkVITIDasg.T
kad_miclu  137  qevIEHRLDLYHRETESViqeyve.............rgiVARVDgtg.Q
1dvrA      170  adaLKKRLAAYHAQTEPIvdfykk.............tgiWAGVDasq.P
kad_mycca  161  ldkVKIRLQTYKEQTLPLidyfkt.............nskFIEIKadnlS
kad_bacsu  163  eetVSKRLEVNMKQTQPLldfyse.............kgyLANVNgqq.D
kadc_maize 156  eekVKLRLETYYQNIESLlsty...............eniIVKVQgda.T
kad_giala  161  edvIRERFRVYAENKDLVdkvf...............nhsVVSINcegqT
kad_salty  159  eetVRKRLVEYHQMTAPLigyyqk........eaeagntkYAKVDgtq.A
kad_lacla  165  petVKNRLDVNIKESAPIiehy.............telglVKNIEgeq.E
kad_parde  162  eesLKTRLMEYYKKTSPLigyy.............yvkgnLNPVDgla.E
1gky       140  eesINKRLSAAQAELAYAetga................hdKVIVNd...D
kgua_bovin 138  eesLAKRLAAARADMESSkepgl...............fdLIIVNd...S
kgua_ecoli 136  eevIAKRMAQAVAEMSHYae..................ydYLIVNd...D
kgua_mycge 139  ettIKKRLEQAKIEFQQIdn..................fkYVVTNk...E
dlg1_drome 134  eeqAKKTYERAIKMEQEFgey.................ftGVVQGd...T
em55_human 135  .......QKDSEAIRSQYahy.................fdLSLVNn...G
va57_vaccv 136  eihRRVILAKTDMDEANEagl.................fdTIIIEd...D
1bif       151  tedFMRRIECYENSYESLdee.qdrdlsyikimdvgqsyvVNRVAdhi.Q
f26l_human 149  ledFLKRIECYEVNYQPLdee.ldshlsyikifdvgtrymVNRVQdhi.Q
f26h_bovin 150  mddFLKRIECYKVTYQPLdpdshdkdlsfikvinvgqrflVNKVQdyi.Q
f26_yeast  148  eadFLERIRQYERFYEPLdpq.kdkdmtfiklvniieevvINKIRtyl.E
6p21_yeast 153  lkdFKSRLANYLKAYEPIed...denlqyikmidvgkkviAYNIQgfl.A

1uky       181  VEDVYKDVQDAIrdsl
kcy_dicdi  178  VNEVYNDVENLFk...
kad1_pig   173  VDDVFSQVCTHL....
kad_schma  173  VDAIFDKVNHELq...
kad_miclu  173  IDDVTERLLQAV....
1dvrA      206  PATVWADILNKLgkn.
kad_mycca  198  AEQVFNQIKGELk...
kad_bacsu  199  IQDVYADVKDLL....
kadc_maize 190  VDAVFAKIDELLgsi.
kad_giala  196  IDEVSLQLDRVLs...
kad_salty  200  VADVRAALEKIL....
kad_lacla  201  ISQVTDDIKKVL....
kad_parde  198  IDEVAAQVAKVM....
1gky       171  LDKAYKELKDFIfaek
kgua_bovin 170  LDKAYWALKEALsee.
kgua_ecoli 165  FDTALTDLKTIIrae.
kgua_mycge 168  FDKTLNELKSILlse.
dlg1_drome 164  IEEIYSKVKSMIwsq.
em55_human 158  VDETLKKLQE......
va57_vaccv 166  VNLAYSKLIQIL....
1bif       199  SRIVYYLMNIHV....
f26l_human 197  SRTVYYLMNIHV....
f26h_bovin 199  SKIVYYLMNIHV....
f26_yeast  196  SRIVFYVMNIRP....
6p21_yeast 199  SQTVYYLLNFNL....

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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