1aisB - reference 4
Name tata-binding protein
Number of sequences 5
Alignment Length 582
Longest Sequence 554
Shortest Sequence 193
Average Percent Identity 13
Maximum Percent Identity 32
Minimum Percent Identity 5
Sequence Name SWISSPROT Accession
1aisB P29095
1volA P28148
1jkw P30274
5EAT P51946
DCS1_GOSAR Q40577
Family 1aisB 1volA 1jkw 5EAT DCS1_GOSAR
1aisB 1 ..................................................
1volA 1 ..................................................
1jkw 1 ..................................................
5EAT 1 ..................................................
DCS1_GOSAR 1 masqvsqmpsssplssnkdemrpkadfqpsiwgdlflncpdknidaetek
1aisB 1 ..................................................
1volA 1 ..................................................
1jkw 1 ..................................................
5EAT 1 ..................................................
DCS1_GOSAR 51 rhqq.lkeevrkmivapmanstqklafidsvqrlgvsyhftkeiedelen
1aisB 1 ..................................................
1volA 1 ..................................................
1jkw 1 ..................................................
5EAT 1 ..................................................
DCS1_GOSAR 100 iyhnnndaendlyttsirfrllrehgynvscdvfnkfkdeqgnfkssvts
1aisB 1 ..................................................
1volA 1 ..................................................
1jkw 1 .......................................myhnssqkrhw
5EAT 1 ..................................................
DCS1_GOSAR 150 dvrgllelyqasylrvhgedildeaisftthhlslavasldhplseevsh
1aisB 1 .............................................nlafa
1volA 1 .............................................ammna
1jkw 12 tfsseeqlarlradanrkfrckavangkvlpndpv.flepheemtlckyy
5EAT 1 .............................................mlhkq
DCS1_GOSAR 200 alkqsirrglprvearhyl.svyqdieshnkallefakidfnmlqflhrk
1aisB 6 .lseldritaqlk....LPRHVEEEAARLYreavrkgli.rgrsiesvma
1volA 6 .fkeittmadrin....LPRNKVDRTNNLFrqayeqksl.kgrandaias
1jkw 61 .ekrllefcsvfk..paMPRSVVGTACMYFkrfylnnsvmeyh.priiml
5EAT 6 elaqvsrwwkdldfvttLPYARDRVVECYFwalgvyfep.qysqarvmlv
DCS1_GOSAR 249 elseicrwwkdldfqrkLPYARDRVVEGYFwisgvyfep.qyslgrkmlt
1aisB 50 aCVYAACRllk.vprt..ldeiadia..................rvdkke
1volA 50 aCLYIACRqeg.vprt..fkeicavs..................riskke
1jkw 107 tCAFLACKvde.fnvs..spqfvgnlres...........plgqekaleq
5EAT 55 kTISMISIvddtfdaygtvkeleaytdaiqrwdineidrlpdymkisyka
DCS1_GOSAR 298 kVIAMASIvddtydsyatyeelipytnaierwdikcideipeymkpsyka
1aisB 79 igrsyrfiarnlnltpkklfvkptdyvnkfadelgl......sekvrrra
1volA 79 igrcfklilkaletsvdlit..tgdfmsrfcsnlcl......pkqvqmaa
1jkw 143 ileyellliqqlnfhlivhn..pyrpfegflidlktrypilenpeilrkt
5EAT 105 ildlykdyekelssagr.......shivchaiermk.....evvrnynve
DCS1_GOSAR 348 lldvyeemvqlvaehgr.qyrveyaknamirlaqsy...........lve
1aisB 123 ieildeayk.r..gltsgksPAGLVAAAlyiasllegekr....tqreva
1volA 121 thiarkave.l..dlvpgrsPISVAAAAiymasqasaekr....tqkeig
1jkw 191 addflnrialt..dayllytPSQIALTAilssasragi......tmesyl
5EAT 143 stwfiegy..t..ppvseylSNALATTTyyylattsylgmksa.teqdfe
DCS1_GOSAR 386 akwtlqnyk..psfeefkanALPTCGYAmlaitsfvgmgdivtpetfkwa
1aisB 166 evarv......tevtvrnrykelveklkikvpia................
1volA 164 diagv......advtirqsyrliyprapdlfpt.dfkfdtpvdklpq...
1jkw 233 seslmlkenrtclsqlldimksmrnlvkkyepprseevavlkqkldrchs
5EAT 188 wls........knpkileasviicrviddtatyeveksrgqiatgieccm
DCS1_GOSAR 434 a........sdpkiiqastiicrfmddvaehkfkhrreddcsaiecymee
1aisB 194 ..................................................
1volA 204 ..................................................
1jkw 283 aelal.............................................
5EAT 230 rdygistkeamakfqnmaetawkdinegllrptpvstefltpilnlariv
DCS1_GOSAR 476 ygvtaqeaydvfnkhvesawkdlnqeflkptemptevlnrslnlarvmdv
1aisB 194 ................................
1volA 204 ................................
1jkw 288 ................................
5EAT 280 evtyihnldgythpeevlkphiinllvdsiki
DCS1_GOSAR 526 lyregdgytyvgkaakggitslliepial...
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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