1eft - reference 1


Name                 eftu								

Number of sequences              4
Alignment Length                 421
Longest Sequence                 405
Shortest Sequence                334
Average Percent Identity         30
Maximum Percent Identity         35
Minimum Percent Identity         25

Sequence Name    SWISSPROT Accession
eftu_theaq           Q01698         
ef1a_sulac           P17196         
erf2_picpi           P23637         
selb_ecoli           P14081         

Family   eftu_theaq ef1a_sulac erf2_picpi selb_ecoli


eftu_theaq   1  akgefirtkphvnVGTIGHVDHGKTTLTAALtyvaaaenpnvevkdygdi
ef1a_sulac   1  .....msqkphlnLIVIGHVDHGKSTLIGRLlmeaakklgkdsekyaflm
erf2_picpi   1  ...dmfggkdhmsIIFMGHVDAGKSTMGGNLlfltgaekyereakdagim
selb_ecoli   1  .............IATAGHVDHGKTTLLQAItgvna..............

eftu_theaq  51  DKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMD
ef1a_sulac  46  DRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQAD
erf2_picpi  48  DTNKEERNDGKTIEVGKSYFETDKRRYTILDAPGHKLYISEMIGGASQAD
selb_ecoli  24  DRLPEEKKRGMTIDLGYAYWPQPGRVPGFIDVPGHEKFLSNMLAGVGGID

eftu_theaq 101  GAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDpe.lldl
ef1a_sulac  96  AAILVVSAKKGEEGQTREHIILSKTMGINQVIVAINKMDLADDekrfkei
erf2_picpi  98  VGVLVISSRKGEGGQSREHAILAKTQGVNKLVVVINKMDDPTSkeryeec
selb_ecoli  74  HALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDE.arvde.

eftu_theaq 150  vemeVRDLLNQYEFPGDEVPVIrgsallaleemhknpktkrgenewvdki
ef1a_sulac 146  vdt.VSKFMKSFGFDMNKVKFVp...vvapdgdnvthkstk....mpwyn
erf2_picpi 148  ttk.LAMYLKGVGYQKGDVLFMp...vsgytgaglkervsqkd..apwyn
selb_ecoli 122  verqVKEVLREYGFAEAK.LFIt....aategrgm...............

eftu_theaq 200  welldaideyIPTPVRDVDKPFLMPVedvftITGRGTVATGRIERGKVKV
ef1a_sulac 188  gptleelldqLEIPPKPVDKPLRIPIqevysISGVGVVPVGRIESGVLKV
erf2_picpi 192  gpslleyldsMPLAVRKINDPFMLPIssk..MKDLGTVIEGKIESGHVKK
selb_ecoli 152  .dalrehllqLPEREHASQHSFRLAIdraftVKGAGLVVTGTALSGEVKV

eftu_theaq 250  GDEVEIVGlapetrktvvtgv.emhrktlQEGIAGDNVGLLLRGVSREEV
ef1a_sulac 238  GDKIVFMPvg...kigevrsi.ethhtkiDKAEPGDNIGFNVRGVEKKDV
erf2_picpi 240  GQNLLVMPnk...tqvevttiyneteaeaDSAFCGEQVRLRLRGIEEEDL
selb_ecoli 201  GDSLWLTGvn...kpmrvral.haqnqptETANAGQRIALNIAGDAKEQI

eftu_theaq 299  ERGQVlakpgsitphtkFEASVYILkkeeggrhtgfftgYRPQFYFRTt.
ef1a_sulac 284  KRGDVagsvqnptvadeFTAQVIVIw.....hptavgvgYTPVLHVHTa.
erf2_picpi 287  SAGYVlssinhvktvtrFEAQIAIVe.....lksilstgFSCVMHVHTai
selb_ecoli 247  NRGDWllad...vppepFTRVIVELq.....thtpl.tqWQPLHIHHAa.

eftu_theaq 348  ...dvtgvvrlpqgvemvmpgdnVTFTVELIKPVALEEGLRFAIRE.ggr
ef1a_sulac 328  ...siacrvsaeknpqfikagdsAIVKFKPIKELVAEKFRRFAMRD.mgk
erf2_picpi 332  eevtftqllhskkapafakqgmkIIAVLETTEPVCIESLGRFTLRD.qgq
selb_ecoli 287  ..shvtgrvsll........ednLAELVFDTPLWLADN.DRLVLRDisar

eftu_theaq 394  tvgagvvtkile.........
ef1a_sulac 374  tvgvgviidv...........
erf2_picpi 381  tiaigkvtkll..........
selb_ecoli 326  ntlagarvv............

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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