1bgl - reference 1


Name                 b-galactoxidase								

Number of sequences              4
Alignment Length                 1002
Longest Sequence                 993
Shortest Sequence                938
Average Percent Identity         31
Maximum Percent Identity         36
Minimum Percent Identity         29

Sequence Name    SWISSPROT Accession
bgal_klepn           P06219         
bgal_strtr           P23989         
bga2_ecoli           P06864         
bgal_klula           P00723         

Family   bgal_klepn bgal_strtr bga2_ecoli bgal_klula


bgal_klepn   1  tpdfhavlaredwhnq.tiTHLNRLPAHpvfaswrdelaardnlpssrrr
bgal_strtr   1  .....mtekiqtylndpkiVSVNTVDAHsdhkyfesleefseg.emklrq
bga2_ecoli   1  .........mnrwen.iqlTHENRLAPRayffsydsvaqartfatsslfl
bgal_klula   1  .......lipenlrn.pkkVHENRLPTRayyy............dqdife

bgal_klepn  50  qLDGSGS.SLTPAARLPSMRVVTQDLPDCRGTPVPSNWQMEGYDAPIYTN
bgal_strtr  45  sLNGKWKIHYAQNTNQVLKDFYKTEFDETDFINVPGHLELQGFGSPQYVN
bga2_ecoli  41  pLSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTD
bgal_klula  31  sLNGPWAFALFDAPLDAPDNLDWETAKKWSTISVPSHWELQKYGKPIYTN

bgal_klepn  99  VRYPIDTTPPRVPEDNPTGCYSLHFTVedtwrengqtqIIFDGVNSAFHL
bgal_strtr  95  TQYPWDLRPPQVPQSNAVASYVKHFTLndalkd.kkvfISFQGVATSIFV
bga2_ecoli  91  EGFPFPIDVPFVPSDNPTGAYQRIFTLsdgwqg.kqtlIKFDGVETYFEV
bgal_klula  81  VQYPIPIDIPNPPTVNPTGVYARTFELdsksiesfehrLRFEGVDNCYEL

bgal_klepn 149  WCNGVWVGYSQDSRLPAAFDLSPFLRPGDNRLCVMVMRWSAGSWLEDQDM
bgal_strtr 144  WVNGNFVGYSEDSFTPSEFEISDYLVEGDNKLAVAVYRYSTASWLEDQDF
bga2_ecoli 140  YVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQWADSTYVEDQDM
bgal_klula 131  YVNGQYVGFNKGSRNGAEFDIQKYVSEGENLVVVKVFKWSDSTYIEDQDQ

bgal_klepn 199  WRMSGIFRSVWLLNKPQQRLCDVQLTPALdalyrdgtlqatieateaala
bgal_strtr 194  WRLYGIFRDVYLYAIPKVHVQDLFVKGDYd..yqtkagqldidlktvgdy
bga2_ecoli 190  WWSAGIFRDVYLVGKHLTHINDFTVRTDFdeaycdatlscevvlenlaas
bgal_klula 181  WWLSGIYRDVSLLKLPKAHIEDVRVTTTFvdqyqdaelsvkvdvqgssyd

bgal_klepn 249  glsvgvslwrgeeqfaagrqplgtptvderghyaervdfslavatpahWS
bgal_strtr 242  edkkikyvlsdyegivtegdasvn.....gdgelsvslenlkikp...WS
bga2_ecoli 240  pvvttltlf.dgervvhssaidhlai.....ekltsatfaftveqpqqWS
bgal_klula 231  hinftlyepedgskvydassllneefisfstkkneetafkinvkapehWT

bgal_klepn 299  AETPNCYRAVVTLWRGDE.LLEAEAWDIGFRRIEIADGLLRLNGKPLLIR
bgal_strtr 284  AESPKLYDLILHVLDDDQ.VVEVVPVKVGFRRFEIKDKLMLLNGKRIVFK
bga2_ecoli 284  AESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYVMLH
bgal_klula 281  AENPTLYKYQLDLIGSDGSVIQSIKHHVGFRQVELKDGNITVNGKDILFR

bgal_klepn 348  GVNRHEHHHLRGQVVTEADMVQDILLMKQNNFNAVRCSHYPNAPRWYELC
bgal_strtr 333  GVNRHEFNARTGRCITEEDMLWDIKVMKQHNINAVRTSHYPNQTRWYELC
bga2_ecoli 334  GVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELC
bgal_klula 331  GVNRHDHHPRFGRAVPLDFVVRDLILMKKFNINAVRNSHYPNHPKVYDLF

bgal_klepn 398  NRYGLYVVDEANIETHGMVPMNRLSDDPAWLPAFSARVTRMVQSNRNHPC
bgal_strtr 383  DEYGLYVIDEANLETHGTWQWNIPASEPEWLPACLDRANNMFQRDKNHAS
bga2_ecoli 384  DIYGLFVMAETDVESHGFADISRITDDPQWEKVYVERIVRHIHAQKNHPS
bgal_klula 381  DKLGFWVIDEADLETHGVQEAHYLSDNPEYEVAYLDRASQLVLRDVNHPS

bgal_klepn 448  IIIWSLGNESGGGGNHEALYHWLKRNDPSRPVQYEGGGADTTATDIICPM
bgal_strtr 433  VIIWSCGNESYAGKDIADMADYFRSVDNTRPVHYEGVAWCREITDIESRM
bga2_ecoli 434  IIIWSLGNESGYGCNIRAMYHAAKRLDDTRLVHYEED.RDAEVVDIISTM
bgal_klula 431  IIIWSLGNEACYGRNHKAMYKLIKQLDPTRLVHYEGD.LNALSADIFSFM

bgal_klepn 498  YarverdqpipavpkwgikkwislpgeqRPLILCEYAHAMGNSLGNFADY
bgal_strtr 483  YakpadieeylttgklvdlssvstnkpqKPYISCEYMHTMGNSGGGLQLY
bga2_ecoli 483  Ytrvplmnefgeyph............pKPRIICEYAHAMGNGPGGLTEY
bgal_klula 480  Yptfeimerwrknhtdengkf......eKPLILCEYGHAMGNGPGSLKEY

bgal_klepn 548  WQAFREYPRLQGGFIWDWADQAIRKTFADGSVGWAYGGDFGDKPNDRQFC
bgal_strtr 533  TDL.EKYPEYQGGFIWDFIDQAIYKTLPNGSEFLSYGGDWHDRPSDYEFC
bga2_ecoli 521  QNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGDYGDYPNNYNFC
bgal_klula 524  QELFYKEKFYQGGFIWEWANHGIEFEDVSTADGYAYGGDFKEEVHDGVFI

bgal_klepn 598  MNGLVFPDRTPHPSLVEAKhaqqyfqftlsplrvriiseylfrptdnevv
bgal_strtr 582  GNGIVFADRTLTPKLQTVKhlysnikiavdeksvtikndnlfedlsaytf
bga2_ecoli 571  LDGLIYSDQTPGPGLKEYKqvvkihardltrgelkvenklwfttlddytl
bgal_klula 574  MDGLCNSEHNPTPGLVEYKkviepvhikiahgsvtitnkhdfittdh.ll

bgal_klepn 648  rwqvqaageplyhgdltlalppegsdeitldslilpegaravwltlevtq
bgal_strtr 632  larvyedgrkvseseyhfdvkpgeeatfpvnfvveasnseqiyevacvlr
bga2_ecoli 621  haevraegeslatqqikldvapnseaqitlpql....dareaflnitvtk
bgal_klula 623  fid.kdtgktidvpslk......peesvtip.......sdttyvvak...

bgal_klepn 698  pqatawseaeHRVAWQQfplpaplgcrrppclpalpdlivsdevwqirag
bgal_strtr 682  .eatewapkgHEIVRGQyvvek....istetpvkaplnvvegd.fnigiq
bga2_ecoli 667  dsrtryseagHPIATYQfplkentaqpvpfapnnarpltleddrlsctvr
bgal_klula 656  .ddagvlkagHEIAWGQaelplkvpdfvtetaekaakindgkryvsvess

bgal_klepn 748  sqcwtid..RRTGLLSRWSVGGQEQLLTPLRDQFIRapl.dndigvseve
bgal_strtr 726  gqnfsillsRAQNTLVSAKYNGVEFIEKGPKLSFTRayt.dndrgagy..
bga2_ecoli 717  gynftfs..KMSGKPTSWQVNGESLLTREPKINFFKpmmidnhk......
bgal_klula 705  glhfild..KLLGKIESLKVKGKESKFEGSSITFWRppt.nnde......

bgal_klepn 795  ridpnawverwrsaglydleahcvqcdaqrlanetlvdcrwhylrge...
bgal_strtr 773  ....pfemagwkvagny.....skvtdtqiqieddsvkvtyvhelpg...
bga2_ecoli 759  ....qeyeglwqpnhlqimqehlrdfave.qsdgevliisrtviapp...
bgal_klula 746  ....prdfknwkkynidlmkqnihgvsvekgsngslavvtvnsrispvvf

bgal_klepn 842  evvivshwrmhftadGTLRLAVDGERAETLPPLPRVGLHFQVADQQAPVS
bgal_strtr 811  lsdvevkvtyqvdykGRIFVTANYDGKAGLPNFPEFGLEFAIGSQFTNLS
bga2_ecoli 801  vfdfgmrctyriaadGQVNVALSGERYGDYPHIPCIGFTMGINGEYDQVA
bgal_klula 792  yygfetvqkytifanKNLNTSMKLTGEYQPPDFPRVGYEFWLGDSYESFE

bgal_klepn 892  WLGLGPHENYPDRRSSACFARWEQPLAAMTTPYIFPTENGLRCDTQALDW
bgal_strtr 861  YYGYGAEESYRDKLPGAYLGRYETSVEKTFAPYLMPQESGNHYGTREFTV
bga2_ecoli 851  YYGRGPGENYADSQQANIIDIWRQAVDAMFENYPFPQNNGNRQHVRWTAL
bgal_klula 842  WLGRGPGESYPDKKESQRFGLYDSKDVEEFV.YDYPQENGNHTDTHFLNI

bgal_klepn 942  GRWHISGHFHFsvqpwstrqLMETDHWHKMQAEDGVWITLDGLHMGVGgd
bgal_strtr 911  SDDNHNGAFEFsalrnsteqIENARHQYELQESDATWIKVLAAQMGVGgd
bga2_ecoli 901  TNRHGNGPINFsawhytqenIHAAQHCNELQRSDDITLNLDHQLLGLGsn
bgal_klula 891  KFFQKEKPFNFkis..deygVDEAAHACDVKRYGRHYLRLDHAIHGVGse

bgal_klepn 992  ds
bgal_strtr 961  dt
bga2_ecoli 951  ..
bgal_klula 939  ..

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index