1dox - reference 1


Name                 ferredoxin [2fe-2s]

Number of sequences              4
Alignment Length                 108
Longest Sequence                 96
Shortest Sequence                91
Average Percent Identity         46
Maximum Percent Identity         62
Minimum Percent Identity         40

Sequence Name    SWISSPROT Accession
1frr                 P00235         
1fxa                 P06543         
dmpp_psesp           P19734         
fer_halha            P00216         

Family   1frr 1fxa dmpp_psesp fer_halha


1frr         1  .ayk.tvlktpsgef.TLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCL
1fxa         1  atfkvtlineaegtkhEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCA
dmpp_psesp   1  ..ynvti..eptge..VIEVEDGQTILQAALRQGVWLPFACGHGTCATCK
fer_halha    1  ............edygTMEVAEGEYILEAAEAQGYDWPFSCRAGACANCA

1frr        48  GKVVSGSVDESEGS..FLDDGQMEEGFV.LTCIAIPESD...LVIET.HK
1fxa        51  GKLVSGTVDQSDQS..FLDDDQIEAGYV.LTCVAYPTSD...VVIQT.HK
dmpp_psesp  45  VQVVEGEVDIGEASPFALMDIERDERKV.LACCAIPLSD...LVIEA.DV
fer_halha   39  SIVKEGEIDMDMQQ..ILSDEEVEEKDVRLTCIGSPAADEVKIVYNAKHL

1frr        91  EEe.....
1fxa        94  EEd.....
dmpp_psesp  90  DA......
fer_halha   87  DYlqnrvi

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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