1ubi - reference 1


Name                 ubiquitin

Number of sequences              4
Alignment Length                 105
Longest Sequence                 94
Shortest Sequence                76
Average Percent Identity         18
Maximum Percent Identity         22
Minimum Percent Identity         15

Sequence Name    SWISSPROT Accession
1ubi                 P02248         
1guaB                P10113         
1alo                 Q46509         
1awd                 P56408         

Family   1ubi 1guaB 1alo 1awd


1ubi         1  mqifvktltgktITLEVEPSDTIENVKakiqdkegIPPD........qqr
1guaB        1  ntirvflpnkqrTVVNVRNGMSLHDCLmkalkvrgLQPEc.......cav
1alo         1  miqkvitvngieQNLFVDAEALLSDVLrqqlgltgVKVGceqgqcgacsv
1awd         1  ykvtlktpsg.eETIECPEDTYILDAAeea.gld.LPYScragacsscag

1ubi        43  lifa..................gkqledgr.tlsdyniqkesTLHLVLrl
1guaB       44  frllheh..............kgkkarldwntdaaslig..eELQVDFl.
1alo        51  ild...................gkvvr....acvtkmkrvadGAQITTie
1awd        48  kvesgevdqsdqsflddaqmgkgfvl.....tcvaypt...sDVTILThq

1ubi        74  rgg..
1guaB       77  .....
1alo        78  gvgq.
1awd        90  eaaly

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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