kinase1 - reference 5


Name                 kinase

Number of sequences              5
Alignment Length                 383
Longest Sequence                 358
Shortest Sequence                285
Average Percent Identity         26
Maximum Percent Identity         41
Minimum Percent Identity         22

Sequence Name    SWISSPROT Accession
trkb_human           Q16620         
q24327               Q24327         
kpro_maize           P17801         
kraf_drome           P11346         
insr_human           P06213         

Family   trkb_human q24327 kpro_maize kraf_drome insr_human


trkb_human   1  sqlkpdtfvqhikrhnivlkreLGEGAFGKVFlaecyn............
q24327       1  kksahiyeqlalprsglseliqIGRGEFGDVFvgklkatlvtspsdkdad
kpro_maize   1  tsnfrrysyrelvkatrkfkveLGRGESGTVYkgvl..............
kraf_drome   1  rdaksseenwnilaeeiligprIGSGSFGTVYrahw..............
insr_human   1  pcsvyvpdewevsrekitllreLGQGSFGMVYegna..............

trkb_human  39  ................................................lc
q24327      51  tekqhsnsengsggsgsgsttlstlnekrrsktsmddieeikeeeqeqhn
kpro_maize  37  ..................................................
kraf_drome  37  ..................................................
insr_human  37  ..............................................rdii

trkb_human  41  peqdkilVAVKTLkda..sdnarkdfhreaeLLTNLQHEHIVKFYGvcve
q24327     101  qsgleqlVLVKALnkvk.deqacqefrrqldLLRAISHKGVVRLFGlcre
kpro_maize  37  ..eddrhVAVKKLenvr...qgkevfqaelsVIGRINHMNLVRIWGfcse
kraf_drome  37  ....hgpVPVKTLnvktpspaqlqafknevaMLKKTRHCNILLFMGcvsk
insr_human  41  kgeaetrVAVKTVnesa.slrerieflneasVMKGFTCHHVVRLLGvvsk

trkb_human  89  gdplimvfeymkhgdlnkflrahgpdavlmaegnp.pteltqsqmlhiaq
q24327     150  kdphymvleytdwgdlkqfllatagkvntatagsssppplttsqvlavay
kpro_maize  82  gshrllvseyvengslanilfsegg...........nilldwegrfnial
kraf_drome  83  ps.laivtqwcegsslykhvhvs.............etkfklntlidigr
insr_human  90  gqptlvvmelmahgdlksylrslrpeaennpg....rppptlqemiqmaa

trkb_human 138  qiaagmvylasq...hfvhrdlatrnclvgenllvkigdfgmsrdv...y
q24327     200  qiargmdaiyra...rfthrdlatrncvissefivkvsypalckdk...y
kpro_maize 121  gvakglaylhheclewvihcdvkpenilldqafepkitdfglvkllnrgg
kraf_drome 119  qvaqgmdylhak...niihrdlksnniflhedlsvkigdfglataktr.w
insr_human 136  eiadgmaylnak...kfvhrdlaarncmvahdftvkigdfgmtrdi...y

trkb_human 182  stdyyrvgghtmlpirwmppesimyrk...fttesdvwslgvvlweift.
q24327     244  sreyhk.hrntllpirwlapeciqede...yttksdifaygvvvwelfnq
kpro_maize 171  stq...nvshvrgtlgyiapewvsslp...itakvdvysygvvllellt.
kraf_drome 165  sge..kqanqptgsilwmapevirmqelnpysfqsdvyafgivmyella.
insr_human 180  etdyyrkggkgllpvrwmapeslkdgv...fttssdmwsfgvvlweits.

trkb_human 228  ygkqpwy...qlsnneviecitqgr....vlqrprtcp..qevyelmlgc
q24327     290  atklphe...eltneqvvqrsqag...slewsvaeatp..dslreillsc
kpro_maize 214  gtrvselvggtdevhsmlrklvr..........mlsaklegeeqswidg.
kraf_drome 212  .eclpygh..isnkdqilfmvgrgllrpdmsqvrsdar..rhskrlaedc
insr_human 226  laeqpyq...glsneqvlkfvmdg....gyldqpdncp..ervtdlmrmc

trkb_human 269  wqrephmrknikgihtllqnlakaspvyldilg
q24327     332  wvsnpkerpsfsqlgaalskamqsaek......
kpro_maize 253  yldsklnrpvnyvqartliklavscleedrskr
kraf_drome 257  ikytpkdrplfrpllnmlenmlrtlpkihrsas
insr_human 267  wqfnpkmrptfleivnllkddlhpsfpevsffh

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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