1ubi


MSF format
Number of sequences              22
Alignment Length                 121
Longest Sequence                 90
Shortest Sequence                63
Average Percent Identity         20
Maximum Percent Identity         70
Minimum Percent Identity         5

1ubi_2          ......MQIFVKTL.TGKTITLEVEPSDTIENVKAKIQDKEG...IPPD.
ned8_mouse      ......MLIKVKTL.TGKEIEIDIEPTDKVERIKERVEEKEG...IPPQ.
ubil_caeel      ........VFVKTL..HRTLFLEVAANEDVLSIKQKIEAAEG...IPAE.
dsk2_yeast      ......LNIHIKSG.QDK.WEVNVAPESTVLQFKEAINKANG...IPVA.
bat3_human      ......LEVLVKTL.DSQTRTFIVGAQMNVKEFKEHIRASVS...IPSE.
r23a_human      ......VTITLKTL.QQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVA.
1guaB_2         ......NTIRVFL.PNKQRTVVNVRNGMSLHDCLMKALKVRG...LQPEC
kraa_human      ......GTVKVYL.PNKQRTVVTVRDGMSVYDSLDKALKVRG...LNQDC
rmil_chick      .......IVRVFL.PNKQRTVVPARCGVTVRDSLKKALMMRG...LIPEC
kraf_drome      .......LLRAHL.PNQQRTSVEVISGVRLCDALMKALKLRQ...LTPDM
kraf_caeel      ......KMIMVHL.PFDQHSRVEVRPGETARDAISKLLKKRN...ITPQL
1awd_2          ......YKVTLKT.PSG.EETIECPEDTYILDAAEEA.GLD....LPYSC
ferv_anava_1    ......YQVRLINKKRAIDITIPVDENTTILDAAEQQ.DIE....LPFSC
fer2_synp6_1    ......YQVEVIY..QGQSQTFTADSDQSVLDSAQAA.GVD....LPASC
dmpp_psepu_1    ......YNVTIE..PTG..EVIEVEDGQTILQAALRQ.GVW....LPFAC
memc_metca_1    ......HTITAVT.EDGESLRFECRSDEDVITAALRQ.NIF....LMSSC
rfbi_salty_1    ........IKIF..PSN..IEFSGREDESILDAALSA.GIH....LEHSC
xylz_psepu_1    ......HKVATDF.EDGVTRFIDANTGETVADAAYRQ.GIN....LPLDC
ascd_yerps_1    ......LNVKLH..PSG..IIFTSDGTSTILDAALDS.NIH....IEYSC
2pia_2          ARENTPFTVRLS..RSG..TSFEIPANRSILEVLRDA.NVR....VPSSC
vanb_pses9_1    ....RAFEGRLA..RSG..LTLQVPAERSVAQVLDDA.GVC....IPLAC
fer_samni       ......YKVKLIT.PDG.PQEFECPDDVYILEHAEEL.GID....IPYSC

1ubi_2          .......QQRLIFA.......................GKQLEDGR..TLS
ned8_mouse      .......QQRLIYS.......................GKQMNDEK..TAA
ubil_caeel      .......EQRLCYA.......................GRQLED......S
dsk2_yeast      .......NQRLIYS.......................GKILKDDQ..TVE
bat3_human      .......KQRLIYQ.......................GRVLQDDK..KLQ
r23a_human      .......GQKLIYA.......................GKILSDDV..PIR
1guaB_2         .......CAVFRLLHEH...................KGKKARLDWNTDAA
kraa_human      .......CVVYRLI......................KGRKTVTAWDTAIA
rmil_chick      .......CAVYRIQ......................DGEKKPIGWDTDIS
kraf_drome      .......CEVSTTH......................SGRHIIP.WHTDIG
kraf_caeel      .......CHVNASSDPKQ..................ESIELSLTMEEIAS
1awd_2          RAGACSSCAGKVESGEVDQSDQS.FLDDAQMG....KGFVL......TCV
ferv_anava_1    QSGSCSSCVAKVVEGEVDQSEQV.FLDEEQMA....KGFIV......LCV
fer2_synp6_1    LTGVCTTCAARILSGEVDQPDAM.GVGPEPAK....QGYTL......LCV
dmpp_psepu_1    GHGTCATCKVQVVEGEVDIGEASPFALMDIERD...ERKVL......ACC
memc_metca_1    REGGCATCKALCSEGDYDLKGCSVQALPPEEEE...EGLVL......LCR
rfbi_salty_1    KAGDCGICESDLLAGEVVDSKGNIFGQ.........GDKIL......TCC
xylz_psepu_1    RDGACGACKCFAESGRYSLGEE..YIEDALSEAEAEQGYVL......TCQ
ascd_yerps_1    KDGTCGSCKAILISGEVDSAENT.FLTEEDVA....KGAIL......TCC
2pia_2          ESGTCGSCKTALCSGEADHRDM..VLRDDE......KGTQIM.....VCV
vanb_pses9_1    EQGICGTCLTRVLDGEPEHRDS..FLTDAERA....RNDQFT.....PCC
fer_samni       RAGSCSSCAGKLVAGSVDQSDQS.FLDDEQIE....EGWVL......TCV

1ubi_2          DYNIQKESTLHLVLRLRGG..
ned8_mouse      DYKILGGSVLHLVLALRG...
ubil_caeel      DCGIDSEATIYVNLELLG...
dsk2_yeast      SYHIQDGHSVHLVKS......
bat3_human      EYNV.GGKVIHLVER......
r23a_human      DYRIDEKNFVVVMVTKTKA..
1guaB_2         SLI...GEELQVDFL......
kraa_human      PLD...GEELIVEV.......
rmil_chick      WLT...GEELHVEV.......
kraf_drome      TLH...VEEIFVRL.......
kraf_caeel      RLP...GNELWVH........
1awd_2          AYPT...SDVTILTHQEAALY
ferv_anava_1    SYPR...SDCTIRTHQEPYL.
fer2_synp6_1    AYPR...SDLKIETHKEDEL.
dmpp_psepu_1    AIPL...SDLVIEADVDA...
memc_metca_1    TYPK...TDLEI.........
rfbi_salty_1    CKPK...TALELNAHFFPEL.
xylz_psepu_1    MRAE...SDCVIRVPAASDV.
ascd_yerps_1    SKAK...SDIELDVNYYPEL.
2pia_2          SRAK..SAELVLDL.......
vanb_pses9_1    SRAR..SACLVLD........
fer_samni       AYPK...SDVTI.........

Back to Index