1krn - reference 1


Name                 serine protease 		

Number of sequences              5
Alignment Length                 82
Longest Sequence                 82
Shortest Sequence                66
Average Percent Identity         45
Maximum Percent Identity         53
Minimum Percent Identity         37

Sequence Name    SWISSPROT Accession
plmn_petma           P33574         
urot_rat             P19637         
urtg_desro           P49150         
hgfa_human           Q04756         
fa12_human           P00748         

Family   plmn_petma urot_rat urtg_desro hgfa_human fa12_human


plmn_petma   1  aCVKGTGEGYRGTAALTVSGKACQAWASQtp.gdvyscq.......glv.
urot_rat     1  dCYVGKGVTYRGTHSFTTSKASCLPWNSMiligktytawransqalglgr
urtg_desro   1  tCYKDQGVTYRGTWSTSESGAQCINWNSNllirrtyngrmpeavklglgn
hgfa_human   1  .CFLGNGTGYRGVASTSASGLSCLAWNSDllyqelhvdsvgaaallglgp
fa12_human   1  sCYDGRGLSYRGLARTTLSGAPCQPWASEatyrnvtaeq...arnwglgg

plmn_petma  42  sNYCRNPDGEKLPWCYtt.......EYCNVPS
urot_rat    51  hNYCRNPDGDAKPWCHvmkdrkltwEYCDMSP
urtg_desro  51  hNYCRNPDGASKPWCYvikarkftsESCSVPV
hgfa_human  50  hAYCRNPDNDERPWCYvvkdsalswEYCRLEA
fa12_human  48  hAFCRNPDNDIRPWCFvlnrdrlswEYCDLAQ

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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