1ppn - reference 1
Name papain
Number of sequences 5
Alignment Length 228
Longest Sequence 220
Shortest Sequence 212
Average Percent Identity 46
Maximum Percent Identity 59
Minimum Percent Identity 41
Sequence Name SWISSPROT Accession
1ppn P00784
1yal P14080
1act P00785
1atk P43235
1cjl P07711
Family 1ppn 1yal 1act 1atk 1cjl
1ppn 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSE
1yal 1 YPQSIDWRAKGAVTPVKNQGACGSXWAFSTIATVEGINKIVTGNLLELSE
1act 1 LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKITSGSLISLSE
1atk 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSP
1cjl 1 APRSVDWREKGYVTPVKNQGQCGSSWAFSATGALEGQMFRKTGRLISLSE
1ppn 51 QELLDCdr..rSYGCNGGYPWSALQLVAQY.gIHYRNTYPYEGVQRYCRS
1yal 51 QELVDCdk..hSYGCKGGYQTTSLQYVANN.gVHTSKVYPYQAKQYKCRA
1act 51 QELIDCgrtqnTRGCDGGYITDGFQFIINDggINTEENYPYTAQDGDCDV
1atk 51 QNLVDCvs..eNDGCGGGYMTNAFQYVQKNrgIDSEDAYPYVGQEESCMY
1cjl 51 QNLVDCsgpegNEGCNGGLMDYAFQYVQDNggLDSEESYPYEATEESCKY
1ppn 98 REKgpyAAKTDGVRQVqpynEGALLYSIA.NQPVSVVLEAAGKDFQLYRG
1yal 98 TDKpgpKVKITGYKRVpsncETSFLGALA.NQPLSVLVEAGGKPFQLYKS
1act 101 ALQdqkYVTIDTYENVpynnEWALQTAVT.YQPVSVALDAAGDAFKQYAS
1atk 99 NPTg.kAAKCRGYREIpegnEKALKRAVARVGPVSVAIDASLTSFQFYSK
1cjl 101 NPKy.sVANDAGFVDIpk.qEKALMKAVATVGPISVAIDAGHESFLFYKE
1ppn 147 GIFVGP.CGN.kVDHAVAAVGYG........pNYILIKNSWGTGWGENGY
1yal 147 GVFDGP.CGT.kLDHAVTAVGYGts....dgkNYIIIKNSWGPNWGEKGY
1act 150 GIFTGP.CGT.aVDHAIVIVGYGte....ggvDYWIVKNSWDTTWGEEGY
1atk 148 GVYYDESCNSdnLNHAVLAVGYGiq....kgnKHWIIKNSWGENWGNKGY
1cjl 149 GIYFEPDCSSedMDHGVLVVGYGfestesdnnKYWLVKNSWGEEWGMGGY
1ppn 187 IRIKRgtgnsygvCGLYTSSFYPvkn..
1yal 191 MRLKRqsgnsqgtCGVYKSSYYPfkgfa
1act 194 MRILRnvgga.gtCGIATMPSYPvky..
1atk 194 ILMARnkn...naCGIANLASFPkm...
1cjl 199 VKMAKdrr...nhCGIASAASYPtv...
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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