1havA - reference 2
Name proteinase HAV
Number of sequences 19
Alignment Length 272
Longest Sequence 242
Shortest Sequence 145
Average Percent Identity 29
Maximum Percent Identity 79
Minimum Percent Identity 10
Sequence Name SWISSPROT Accession
5ptp P00760
1dpo P00763
1trnB P07477
1bit P35031
1fxyA P07477
1ao5A P36368
1fleE P19957
1dsuB P00746
1faxA P00742
1autC P04070
1azzB P00771
1bthH P00734
1danH P13726
6chaB P00766
1try P35049
1havA P06441
1agjA P09331
2sga P00776
1svpA P27285
Family 5ptp 1dpo 1trnB 1bit 1fxyA 1ao5A 1fleE 1dsuB 1faxA 1autC 1azzB 1bthH 1danH 6chaB 1try
Family 1havA
Family 1agjA
Family 2sga
Family 1svpA
5ptp 1 ..pyqvslns.....GYHFCGGSLIn...sqwVVSAAHcy..........
1dpo 1 ..pyqvslns.....GYHFCGGSLIn...dqwVVSAAHcy..........
1trnB 1 ..pyqvslns.....GYHFCGGSLIn...eqwVVSAGHcy..........
1bit 1 ..ahqvslns.....GYHFCGGSLVn...enwVVSAAHcy..........
1fxyA 1 ..pwqallinee...NEGFCGGTILs...efyILTAAHcl........yq
1ao5A 1 ..pwqvavyyq....KEHICGGVLLd...rnwVLTAAHcy..........
1fleE 1 ..psqislqyrsgssWAHTCGGTLIr...qnwVMTAAHcv........dr
1dsuB 1 ..pymasvqln....GAHLCGGVLVa...eqwVLSAAHcl......edaa
1faxA 1 ..pwqallinee...NEGFCGGTILs...efyILTAAHcl........yq
1autC 1 ..pwqvvlldsk...KKLACGAVLIh...pswVLTAAHcm........de
1azzB 1 ..phqaalfid....DMYFCGGSLIs...pewILTAAHcm........dg
1bthH 1 ..pwqvmlfrksp..QELLCGASLIs...drwVLTAAHcllyppwdknft
1danH 1 ..pwqvlllvn....GAQLCGGTLIn...tiwVVSAAHcf.....dkikn
6chaB 1 ..pwqvslqdkt...GFHFCGGSLIn...enwVVTAAHcg.........v
1try 1 ..pfivsisrn....GGPWCGGSLLn...antVLTAAHcv......sgya
1havA 1 knlvqfgvgekn...GSVRWVMNALgvk.ddwLLVPSHaykfe...kdye
1agjA 1 ntignvfvk......GQTSATGVLIg...kntVLTNRHiakfa.....ng
2sga 1 iaggeaittg.....GSRCSLGFNVsvngvahALTAGHct..........
1svpA 1 ..drlfdvkned...GDVIGHALAMe....gkVMKPLHvk..........
5ptp 31 ksGIQVRLGedninvveg..neqfisasKSIVHPSYn...........sn
1dpo 31 ksRIQVRLGehninvleg..neqfvnaaKIIKHPNFd...........rk
1trnB 31 ksRIQVRLGehnievleg..neqfinaaKIIRHPQYd...........rk
1bit 31 ksRVEVRLGehnikvteg..seqfisssRVIRHPNYs...........sy
1fxyA 35 akRFKVRVGdrnteqeeg..geavheveVVIKHNRFt...........ke
1ao5A 32 vdQYEVWLGknklfqeep..saqhrlvsKSFPHPGFnmsllmlqtippga
1fleE 38 elTFRVVVGehnlnqnng..teqyvgvqKIVVHPYWn.........tddv
1dsuB 36 dgKVQVLLGahslsqpep..skrlydvlRAVPHPDSq...........pd
1faxA 35 akRFKVRVGdrntaaeeg..geavheveVVIKHNRFt...........ke
1autC 35 skKLLVRLGeydlrrwek..weldldikEVFVHPNYs...........ks
1azzB 34 agFVDVVLGahniredea..tqvtiqstDFTVHENYn...........sf
1bthH 44 enDLLVRIGkhsrtryern.iekismleKIYIHPRYn..........wre
1danH 37 wrNLIAVLGehdlsehdg..deqsrrvaQVIIPSTYv...........pg
6chaB 34 ttSDVVVAGefdqgssse..kiqklkiaKVFKNSKYn...........sl
1try 36 qsGFQIRAGslsrtsg.....gitsslsSVRVHPSYs.............
1havA 44 mmEFYFNRGg..........tyysisagNVVIQSLDv.............
1agjA 37 dpSKVSFRPsintddngntetpygeyevKEILQEPFg.............
2sga 36 nisaswsig..................tRTGTSFP...............
1svpA 32 ...gtidhp.............vlsklkFTKSSA................
5ptp 68 tlnnDIMLIKLksaaslnsrVASISLPtsc......asaGTQCLISGWGn
1dpo 68 tlnnDIMLIKLsspvklnarVATVALPssc......apaGTQCLISGWGn
1trnB 68 tlnnDIMLIKLssravinarVSTISLPtap......patGTKCLISGWGn
1bit 68 nidnDIMLIKLskpatlntyVQPVALPtsc......apaGTMCTVSGWGn
1fxyA 72 tydfDIAVLRLktpitfrmnVAPASLPtap......patGTKCLISGWGn
1ao5A 80 dfsdDLMLLRLskpaditdvVKPIALPtke......pkpGSKCLASGWGs
1fleE 77 aagyDIALLRLaqsvtlnsyVQLGVLPragt....ilanNSPCYITGWGl
1dsuB 73 tidhDLLLLQLsekatlgpaVRPLPWQrvdd.....vapGTLCDVAGWGi
1faxA 72 tydfDIAVLRLktpitfrmnVAPACLPerdwaes.tlmtQKTGIVSGFGr
1autC 72 ttdnDIALLHLaqpatlsqtIVPICLPdsglaerelnqaGQETLVTGWGy
1azzB 71 visnDIAVIRLpvpvtltaaIATVGLPstd......vgvGTVVTPTGWGl
1bthH 83 nldrDIALMKLkkpvafsdyIHPVCLPdretaas.llqaGYKGRVTGWGn
1danH 74 ttnhDIALLRLhqpvvltdhVVPLCLPertfser.tlafVRFSLVSGWGq
6chaB 71 tinnDITLLKLstaasfsqtVSAVCLPsasdd....faaGTTCVTTGWGl
1try 68 gnnnDLAILKLstsipsggnIGYARLAasgsd....pvaGSSATVAGWGa
1havA 71 .gfqDVVLMKVptipkfrd.ITQHFIKkgdvpr...alnRLATLVTTVN.
1agjA 74 .agvDLALIRLkpdqngvs.LGDKISPakigtsnd.lkdGDKLELIGYPf
2sga 53 ..nnDYGIIRHsnpaaadgrVYLYNGSyqdittagnafvGQAVQRSGSTt
1svpA 50 ...yDMEFAQL..pvnmrseAFTYT.............sEHPEGFYNWHh
5ptp 112 tkss.....gtsypdvlkclkapilsdsscksayp......gqitsnmfc
1dpo 112 tlss.....gvnepdllqcldapllpqadceasyp......gkitdnmvc
1trnB 112 tass.....gadypdelqcldapvlsqakceasyp......gkitsnmfc
1bit 112 tmss......tadsnklqclnipilsysdcnnsyp......gmitnamfc
1fxyA 116 tass.....gadypdelqcldapvlsqakceasyp......gkitsnmfc
1ao5A 124 itpt......wqkpddlqcvfitllpnencakvyl......qkvtdvmlc
1fleE 123 trtn......gqlaqtlqqaylptvdyaicssssywg....stvknsmvc
1dsuB 118 vnha......grrpdslqhvllpvldratcnrrthhd....gaiterlmc
1faxA 121 thek......grqstrlkmlevpyvdrnscklsss......fiitqnmfc
1autC 122 hssre.keakrnrtfvlnfikipvvphnecsevms......nmvsenmlc
1azzB 115 psdsa.....lgisdvlrqvdvpimsnadcdavy.......givtdgnic
1bthH 132 lketwttnvgkgqpsvlqvvnlpiverpvckdstr......iritdnmfc
1danH 123 lldr......gatalelmvlnvprlmtqdclqqsrkv.gdspniteymfc
6chaB 117 try.......antpdrlqqaslpllsntnckkywg......tkikdamic
1try 114 tseg.....gsstpvnllkvtvpivsratcraqyg.....tsaitnqmfc
1havA 115 .............gtpmlisegplkmeekatyvhk....kndgttvdltv
1agjA 121 dhkv..........nqmhrseielttlsr.................glry
2sga 101 ..........glrsgsvtglnatvnygss.................givy
1svpA 82 .................gavqys......................ggrft
5ptp 151 agyleg...gkdscQGDSGGPVVcs......gkLQGIVSWGs..gcaqkn
1dpo 151 vg.leg....gdscQGDCGGPVVcn......geLQGIVSWGy..gca.pd
1trnB 151 vgfleg...gkdscQGDSGGPVVcn......gqLQGVVSWGd..gcaqkn
1bit 150 agyleg...gkdscQGDSGGPVVcn......geLQGVVSWGy..gcaepg
1fxyA 155 vgfleg...gkdscQGDSGGPVVcn......gqLQGVVSWGd..gcaqkn
1ao5A 162 agemgg...gkdtcRDDSGGPLIcd......giLQGTTSYGp.vpcgkpg
1fleE 163 agg.dg...vrsgcQGDSGGPLHcl..vngqyaVHGVTSFVsrlgcnvtr
1dsuB 158 aesn.....rrdscKGDSGGPLVcg......gvLEGVVTSGsr.vcgnrk
1faxA 159 agydtk...qedacQGDSGGPHVtr..fkdtyfVTGIVSWGe..gcarkg
1autC 165 agilgd...rqdacEGDSGGPMVas..fhgtwfLVGLVSWGe..gcgllh
1azzB 153 idstg....gkgtcNGDSGGPLNyn......glTYGITSFGaaagc.eag
1bthH 176 agykpdegkrgdacQGDSGGPFVmkspfnnrwyQMGIVSWGe..gcdrdg
1danH 166 agysdg...skdscKGDSGGPHAth..yrgtwyLTGIVSWGq..gcatvg
6chaB 154 agas.....gvsscMGDSGGPLVck..kngawtLVGIVSWGs.stcs.ts
1try 154 agvssg...gkdscQGDSGGPIVds.....sntLIGAVSWGn..gcarpn
1havA 148 dqawrg...kgeglPGMCGGALVss.nqsiqnaILGIHVAGg........
1agjA 144 y.........gftvPGNSGSGIFns.....ngeLVGIHSSKv..shldre
2sga 124 gmiqtn....vcaqPGDSGGSLFag......stALGLTSGGs..gncrtg
1svpA 93 iprg.......vggRGDAGRPIMdn.....sgrVVAIVLGGa.....deg
5ptp 190 kpGVYTKVCNYVSWIkqtiasn
1dpo 187 npGVYTKVCNYVDWIqdtiaan
1trnB 190 kpGVYTKVYNYVKWIkntiaan
1bit 189 npGVYAKVCIFNDWLtstmasy
1fxyA 194 kpGVYTKVYNYVKWIkntiaan
1ao5A 202 vpAIYTNLIKFNSWIkdtmmkn
1fleE 207 kpTVFTRVSAYISWInnviasn
1dsuB 196 kpGIYTRVASYAAWIdsvla..
1faxA 202 kyGIYTKVTAFLKWIdrsmktr
1autC 208 nyGVYTKVSRYLDWIhghir..
1azzB 192 ypDAFTRVTYFLDWIqtqtgit
1bthH 224 kyGFYTHVFRLKKWIqkvi...
1danH 209 hfGVYTRVSQYIEWLqklmrse
6chaB 195 tpGVYARVTALVNWVqqtlaan
1try 194 ysGVYASVGALRSFIdtya...
1havA 186 nsILVAKLVT.QEMFqnidk..
1agjA 178 hqINYGVGI..GNYVkriinek
2sga 162 gtTFYQPVTEALSAYgatv...
1svpA 126 trTALSVVTW..NSKgktiktt
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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