1r69 - reference 3


Name                 repressor										

Number of sequences              23
Alignment Length                 91
Longest Sequence                 78
Shortest Sequence                56
Average Percent Identity         19
Maximum Percent Identity         64
Minimum Percent Identity         1

Sequence Name    SWISSPROT Accession
1r69                 P16117         
rcro_bp434           P03036         
rpc2_bpp22           P03035         
1lmb3                P03034         
sinr_bacli           P22753         
1au7A                P10037         
ipou_drome           P24350         
oct3_mouse           P20263         
hm18_caeel           P41934         
po61_mouse           Q07916         
1neq_1               P06020         
nlp_ecoli            P18837         
dbne_bpd10           P06903         
nlp_haein            P46496         
1a04A                P10957         
ygek_ecoli           Q46791         
yz18_myctu           Q10550         
moar_kleae           P54794         
yexn_aersa           P45785         
dctr_rhoca           P37740         
fixj_azoca           P26487         
gere_bacsu           P11470         
uhpa_salty           P27667         

Family   1r69 rcro_bp434 rpc2_bpp22 1lmb3 sinr_bacli
Family   1au7A ipou_drome oct3_mouse hm18_caeel po61_mouse
Family   1neq_1 nlp_ecoli dbne_bpd10 nlp_haein
Family   1a04A ygek_ecoli yz18_myctu moar_kleae yexn_aersa dctr_rhoca fixj_azoca gere_bacsu uhpa_salty


1r69         1  ........sissRVkskriql....GLNQAELAQKV.........gTTQQ
rcro_bp434   1  ........tlseRLkkrrial....KMTQTELATKA.........gVKQQ
rpc2_bpp22   1  .........mgeRIrarrkkl....KIRQAALGKMV.........gVSNV
1lmb3        1  p.ltqeqledarRLkaiyekkknelGLSQESVADKM.........gMGQS
sinr_bacli   1  ........migqRIkqyrkek....GYSLSELAEKA.........gVAKS
1au7A        1  ..gmraleqfanEFkvrrikl....GYTQTNVGEALaavh...gseFSQT
ipou_drome   1  ....releafaeRFkqrrikl....GVTQADVGKALanlklpgvgaVSQS
oct3_mouse   1  ....keleqfakLLkqkritl....GYTQADVGLTLgvlf...gkvFSQT
hm18_caeel   1  ...mneleafaqTFkkqrikf....GFTQGDVGVALgkry...gtdFSQT
po61_mouse   1  ...leeirefakNFkirrlsl....GLTQTQVGQALtate...gpaYSQS
1neq_1       1  csnekardwhraDViaglkkr....KLSLSALSRQF.........gYAPT
nlp_ecoli    1  .......dwhpaDIiaglrkk....GTSMAAESRRN.........gLSSS
dbne_bpd10   1  ...tnrqdwhraDIvaelrkr....NMSLAELGRSN.........hLSSS
nlp_haein    1  ..ktaeqdwhraDIlaelkkn....GWSLRSLAKEG.........qVSYN
1a04A        1  erdvnqltprerDIlkliaq.....GLPNKMIARRL.........dITES
ygek_ecoli   1  ....nqltnresEIlqliad.....GKTNKEIANFL.........qLSRK
yz18_myctu   1  argwgsltpterDVvrlvse.....GLSNKDIAKRL.........fVSPR
moar_kleae   1  ......ltakerEIvgmvre.....GASNKLIARQL.........dISLS
yexn_aersa   1  ....drltrrerQVaelllq.....GLDTEAIAAAL.........gIGNG
dctr_rhoca   1  .....slsareaEVmalmle.....GLMNKQIAERL.........gIAMR
fixj_azoca   1  .kriaglsqrerQVleclvn.....GLANKTIAYDL.........gISPR
gere_bacsu   1  .....sltkrerEVfellvq.....DKTTKEIASEL.........fISEK
uhpa_salty   1  ....dpltkrerQVaeklaq.....GMAVKEIAAEL.........gLSPK

1r69        30  SIEQlengktkr...prflpelasalgvsvdwllngt....
rcro_bp434  30  SIQLieagvtkr...prflfeiamalncdpvwlqyg.....
rpc2_bpp22  29  AISQwersete..pngenllalskalqcspdyllkg.....
1lmb3       41  GVGAlfngina..lnaynaallakilkvsveefsps.....
sinr_bacli  30  YLSSiernlqt.npsiqflekvsavldvsvhtlln......
1au7A       42  TICRfenlqls....fknacklkailskwleeaeqkrrtti
ipou_drome  43  TICRfesltls....hnnmialkpilqawleeae.......
oct3_mouse  40  TICRfealqls....lknmcklrpllekwveeadn......
hm18_caeel  41  TISRfealnls....fknmcklrpllkewladve.......
po61_mouse  41  AICRfekldit....pksaqklkpvlekwlmeae.......
1neq_1      38  TLANalerhw.....pkgeqiianaletkpeviwpsr....
nlp_ecoli   31  TLANalsrpw.....pkgemiiakalgtdpwviwpsryhdp
dbne_bpd10  35  TLKNaldkry.....pkaekiiadalgmtpqdiwpsry...
nlp_haein   36  TLKTvldksy.....pkmerlvanaigvppeviwagrfaer
1a04A       37  TVKVhvkhmlkkmklksrveaavwvhqerif..........
ygek_ecoli  33  TVEThrlnimkkldvhsgieliktalrmgvcti........
yz18_myctu  37  TVQThlthvyaklglasrvqlvdeaarrgsps.........
moar_kleae  31  TVKThlrnifaktevvnrtelvsrtwmpaaqrtlhl.....
yexn_aersa  33  TVKNhrkhlygklrlgsraelfnlflnhli...........
dctr_rhoca  32  TVEVhrsrvlakmgarniadlarmt................
fixj_azoca  36  TVEVyranvmtkmkaaslpelvrmallagvapaddatpt..
gere_bacsu  32  TVRNhisnamqklgvkgrsqavvellrmgelel........
uhpa_salty  33  TVHVhranlleklgvsndvelahrmfdgw............

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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