9rnt - reference 1


Name                 Ribonuclease		

Number of sequences              5
Alignment Length                 106
Longest Sequence                 103
Shortest Sequence                96
Average Percent Identity         57
Maximum Percent Identity         65
Minimum Percent Identity         51

Sequence Name    SWISSPROT Accession
1rms                 P00653         
1fus                 P10282         
rnn1_neucr           P09646         
rnt1_triha           P26875         
rnu1_ustsp           P07736         

Family   1rms 1fus rnn1_neucr rnt1_triha rnu1_ustsp


1rms         1  saeytCGSTCYWSSDVSAAKAKgyslyesgdti..ddYPHEYHDYEGFDF
1fus         1  ..attCGSTNYSASQVRAAANAacqyyqnddta.sstYPHTYNNYEGFDF
rnn1_neucr   1  acmyiCGSVCYSSSAISAALNKgysyyedgatagsssYPHRYNNYEGFDF
rnt1_triha   1  ....tCGKVFYSASAVSAASNAacnyvragstaggstYPHVYNNYEGFRF
rnu1_ustsp   1  .....CGGTYYSSTQVNRAINNaksgqys.....stgYPHTYNNYEGFDF

1rms        49  p..vsGTYYEYPIMSDYDVYTGGSPGADRVIFNGDD.ELAGVITHTGASG
1fus        48  p..vdGPYQEFPIKS.GGVYTGGSPGADRVVINTNB.EYAGAITHTGASG
rnn1_neucr  51  p..taKPWYEFPILSSGRVYTGGSPGADRVIFDSHG.NLDMLITHNGASG
rnt1_triha  47  kg.lsKPFYEFPILSSGKTYTGGSPGADRVVINGQC.SIAGIITHTGASG
rnu1_ustsp  41  sdycdGPYKEYPLKTSSSGYTGGSPGADRVVYDSNDGTFCGAITHTGASG

1rms        96  DDFVAC
1fus        94  NNFVGA
rnn1_neucr  98  NNFVAC
rnt1_triha  95  NAFVAC
rnu1_ustsp  91  NNFVQC

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index