1dynA - reference 4


Name                 pleckstrin homology domain

Number of sequences              6
Alignment Length                 893
Longest Sequence                 848
Shortest Sequence                89
Average Percent Identity         18
Maximum Percent Identity         27
Minimum Percent Identity         8

Sequence Name    SWISSPROT Accession
DYN3_RAT             Q08877         
bmx_human            P51813         
b21_human            Q15438         
1btkA                Q06187         
1pls                 P08567         
1awe                 Q07889         

Family   DYN3_RAT bmx_human b21_human 1btkA 1pls 1awe


DYN3_RAT     1  mgnremeeliplvnrlqdafsalgqscllelpqiavvggqsagkssvlen
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT    51  fvgrdflprgsgivtrrplvlqlvtskaeyaeflhckgkkftdfdevrhe
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT   101  ieaetdrvtgmnkgissvpinlrvysphvlnltlidlpgitkvpvgdqpp
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT   151  dieyqirdmimqfitrenclilavtpantdlansdalklakevdpqglrt
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT   201  igvitkldlmdegtdardvlenkllplrrgyvgvvnrsqkdidgkkdika
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT   251  amlaerkfflshpayrhiadrmgtphlqkvlnqqltnhirdtlpnfrnkl
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT   301  qgqllsieheveafknfkpedptrktkallqmvqqfavdfekriegsgdq
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT   351  vdtlelsggakinrifherfpfeivkmefnekelrreisyaiknihgirt
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT   401  glftpdmafeaivkkqivklkgpslksvdlvmqelintvkkctkrlanfp
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ..................................................

DYN3_RAT   451  rlceeterivanhireregktkdqvlllidiqvsyintnhedfigfanaq
bmx_human    1  ..................................................
b21_human    1  ..................................................
1btkA        1  ..................................................
1pls         1  ..................................................
1awe         1  ...........................................mneiqkn

DYN3_RAT   501  qrssqvhkkstignqvirkgwltvsnigimk...ggskgyWFVLtaesls
bmx_human    1  .................qkkkmspnny..........kerLFVLtktnls
b21_human    1  .................regwllklgggrvk....twkrrWFILtdncly
1btkA        1  .............aavilesiflkrsqqkkktsplnfkkcLFLLtvhkls
1pls         1  ...........mepkriregylvkkgsvf.....ntwkpmWVVLledgie
1awe         8  idgwegkdigqccnefimegtltrvg........akherhIFLF.dglmi

DYN3_RAT   548  wykdd........eekekkymlpl...dnlkvrdvekgf...........
bmx_human   24  yyeyd........kmkrgsrkgsi...eikkircvekvn...........
b21_human   30  yfeyt........tdkeprgiipl...enlsireveds............
1btkA       38  yyeyd....fergrrgskkgsidv...ekitcvetvvpeknppperqime
1pls        35  fykkk........sdnspkgmipl...kgstltspcqdf...........
1awe        49  ccksnhgqprlpgasnaeyrlkekffmrkvqindkddt............

DYN3_RAT   576  .....msskhvfalfn..............teqrnvykdyrslelacdsq
bmx_human   52  .....leeqtpverq...............ypfqivykdgllyvyasn.e
b21_human   57  ......kkpncfelyipdnkdqvikackteadgrvvegnhtvyrisaptp
1btkA       81  qisiierfpypfqvvy..............d........egplyvfspte
1pls        63  .....gkrmfvfkitt.....................tkqqdhffqaafl
1awe        87  .....neykhafeiil.....................kdensvifsaksa

DYN3_RAT   607  EDVDSWkasllra.gvypdksftendengqaenfsmdpqlerqvetirnl
bmx_human   81  ESRSQWlka.........................................
b21_human  101  EEKEEWikcikaaisrdpfye.............................
1btkA      109  ELRKRWihqlknv.irynsdlvqkyhpcfwidgqylccsqtaknamgcqi
1pls        87  EERDAWvrdinka.ikcieglehhhhhh......................
1awe       111  EEKNNWmaalislqyrstle..............................

DYN3_RAT   656  vdsymsiinkcirdlipktimhlminnvkdfinsellaqlyssedqntlm
bmx_human   90  ..................................................
b21_human  122  ..................................................
1btkA      158  len...............................................
1pls       114  ..................................................
1awe       131  ..................................................

DYN3_RAT   706  eesveqaqrrdemlrmyqalkealaiigdintvtvstpapppvddswlqh
bmx_human   90  ..................................................
b21_human  122  ..................................................
1btkA      161  ..................................................
1pls       114  ..................................................
1awe       131  ..................................................

DYN3_RAT   756  srrspppspttqrrltlsaplprpassrgpapaipspgphsgappvpfrp
bmx_human   90  ..................................................
b21_human  122  ..................................................
1btkA      161  ..................................................
1pls       114  ..................................................
1awe       131  ..................................................

DYN3_RAT   806  gplppfpnssdsygappqvpsrptrappsvprfgavkeeavep
bmx_human   90  ...........................................
b21_human  122  ...........................................
1btkA      161  ...........................................
1pls       114  ...........................................
1awe       131  ...........................................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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