1r69 - reference 2


Name                 repressor										

Number of sequences              23
Alignment Length                 88
Longest Sequence                 78
Shortest Sequence                56
Average Percent Identity         26
Maximum Percent Identity         68
Minimum Percent Identity         1

Sequence Name    SWISSPROT Accession
1a04A                P10957         
narp_ecoli           P31802         
narp_haein           P44845         
ygek_ecoli           Q46791         
yz18_myctu           Q10550         
moar_kleae           P54794         
yexn_aersa           P45785         
dctr_rhoca           P37740         
fixj_azoca           P26487         
gere_bacsu           P11470         
uhpa_salty           P27667         
yxjl_bacsu           P55184         
csgd_ecoli           P52106         
agmr_pseae           P29369         
nodw_braja           P15940         
rhlr_pseae           P54292         
yhjb_ecoli           P37640         
moxx_parde           P29904         
yc29_porpu           P51343         
1r69                 P16117         
1au7A                P10037         
1neq                 P06020         
1lmb3                P03034         

Family   1a04A narp_ecoli narp_haein ygek_ecoli yz18_myctu moar_kleae yexn_aersa dctr_rhoca fixj_azoca gere_bacsu uhpa_salty yxjl_bacsu csgd_ecoli agmr_pseae nodw_braja rhlr_pseae yhjb_ecoli moxx_parde yc29_po1r69
Family   1r69
Family   1au7A
Family   1neq
Family   1lmb3


1a04A        1  erdvnqltprerDIlkliaq.....GLPNKMIARRL......dITESTVK
narp_ecoli   1  edpfsvlterelDVlhelaq.....GLSNKQIASVL......nISEQTVK
narp_haein   1  dnpldsltdremGVlrqiat.....GLSNKQIAAQL......fISEETVK
ygek_ecoli   1  ....nqltnresEIlqliad.....GKTNKEIANFL......qLSRKTVE
yz18_myctu   1  argwgsltpterDVvrlvse.....GLSNKDIAKRL......fVSPRTVQ
moar_kleae   1  ......ltakerEIvgmvre.....GASNKLIARQL......dISLSTVK
yexn_aersa   1  ....drltrrerQVaelllq.....GLDTEAIAAAL......gIGNGTVK
dctr_rhoca   1  .....slsareaEVmalmle.....GLMNKQIAERL......gIAMRTVE
fixj_azoca   1  .kriaglsqrerQVleclvn.....GLANKTIAYDL......gISPRTVE
gere_bacsu   1  .....sltkrerEVfellvq.....DKTTKEIASEL......fISEKTVR
uhpa_salty   1  ....dpltkrerQVaeklaq.....GMAVKEIAAEL......gLSPKTVH
yxjl_bacsu   1  eelaepftkrelEVlqqmay.....GLRNEDIAEKL......fVSESTVK
csgd_ecoli   1  stesallthrekEIlnklri.....GASNNEIARSL......fISENTVK
agmr_pseae   1  ...lqaltrkqlLVlermtk.....GESNKQIAYNL......dIAETTVK
nodw_braja   1  kslfetlspreqAVmklvat.....GLMNKQVAAEL......gLAEITVK
rhlr_pseae   1  ......lshrerEIlqwtad.....GKSSGEIAIIL......sISESTVN
yhjb_ecoli   1  .kdlkslsarqrEIltmlaa.....GESNKEIGRAL......nISTGTVK
moxx_parde   1  .....rltgreeEIlgmite.....GMSYRDIADRA......cISYKTVS
yc29_porpu   1  ......ltprekSIlnlvid.....GLTNKEIAVIL......dTSIRNVE
1r69         1  ........sissRVkskriql....GLNQAELAQKV......gTTQQSIE
1au7A        1  ..gmraleqfanEFkvrrikl....GYTQTNVGEALaavhgseFSQTTIC
1neq         1  csnekardwhraDViaglkkr....KLSLSALSRQF......gYAPTTLA
1lmb3        1  .pltqeqledarRLkaiyekkknelGLSQESVADKM......gMGQSGVG

1a04A       40  VHVkhmlkkmklksrveaavwvhqerif..........
narp_ecoli  40  VHIrnllrklnvrsrvaatilflqqr............
narp_haein  40  VHIrnllrklnvhsrvaatvlffeq.............
ygek_ecoli  36  THRlnimkkldvhsgieliktalrmgvcti........
yz18_myctu  40  THLthvyaklglasrvqlvdeaarrgsps.........
moar_kleae  34  THLrnifaktevvnrtelvsrtwmpaaqrtlhl.....
yexn_aersa  36  NHRkhlygklrlgsraelfnlflnhli...........
dctr_rhoca  35  VHRsrvlakmgarniadlarmt................
fixj_azoca  39  VYRanvmtkmkaaslpelvrmallagvapaddatpt..
gere_bacsu  35  NHIsnamqklgvkgrsqavvellrmgelel........
uhpa_salty  36  VHRanlleklgvsndvelahrmfdgw............
yxjl_bacsu  40  THVhrilqkcnaqdrtqavvfairngi...........
csgd_ecoli  40  THLynlfkkiavknrtqavswandn.............
agmr_pseae  37  AHVsailrklkvhnrvqailsagdidfaaylrr.....
nodw_braja  40  IYRghvmkkmrarsladlirmsetlgisanhteqtqv.
rhlr_pseae  34  FHHkniqkkfdapnktlaaayaaalgl...........
yhjb_ecoli  39  AHLeslyrrlevknrtqaammlniss............
moxx_parde  35  NVSlvlkdklgaanladlvvkgiry.............
yc29_porpu  34  KYVsrllqktntrnrtllvkysiknnl...........
1r69        33  QLEngktkr..prflpelasalgvsvdwllngt.....
1au7A       45  RFEnlqls...fknacklkailskwleeaeqkrrtti.
1neq        41  NALerhw....pkgeqiianaletkpeviwpsr.....
1lmb3       44  ALFnginaln.aynaallakilkvsveefsps......

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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