1csy - reference 2


Name                 sh2 fragment										

Number of sequences              19
Alignment Length                 109
Longest Sequence                 99
Shortest Sequence                75
Average Percent Identity         29
Maximum Percent Identity         71
Minimum Percent Identity         2

Sequence Name    SWISSPROT Accession
lnk_rat              P50745         
crkl_mouse           P47941         
nck_human            P16333         
ht16_hydat           P53356         
pip5_human           P16885         
fer_human            P16591         
fps_drome            P18106         
ctk_rat              P41243         
1ab2                 P00519         
2pna                 P23727         
1mil                 P29353         
1blj                 P16277         
1shd                 P12931         
1lkkA                P06239         
1aya                 P35235         
1csy                 P43405         
1bfi                 P23727         
1gri                 P29354         
1bcpD                P04981         

Family   lnk_rat crkl_mouse nck_human ht16_hydat pip5_human fer_human fps_drome ctk_rat 1ab2 2pna 1mil 1blj 1shd 1lkkA 1aya 1csy 1bfi 1gri
Family   1bcpD


lnk_rat      1  ...........ypWFHGPisrvraaQLVQlqgpdahgVFLVRQSESrr.g
crkl_mouse   1  ...........saWYMGPvtrqeaqTRLQgqr...hgMFLVRDSSTcp.g
nck_human    1  .............WYYGKvtrhqaeMALNergh..egDFLIRDSESsp.n
ht16_hydat   1  .............WYHGKitrevavQVLLrkggr.dgFFLIRDCGNap.e
pip5_human   1  ...........kpWYYDSlsrgeaeDMLMripr..dgAFLIRKREGs..d
fer_human    1  .............WYHGAiprieaqELLKk.....qgDFLVRESHGkp.g
fps_drome    1  ...........eeWFHGVlpreevvRLLNn.....dgDFLVRETIRnees
ctk_rat      1  ...........mpWFHGKisgqeaiQQLQppe...dgLFLVRESARhp.g
1ab2         1  ...........hsWYHGPvsrnaaeYLLSsgi...ngSFLVRESESsp.g
2pna         1  ........lqdaeWYWGDisreevnEKLRdta...dgTFLVRDASTkmhg
1mil         1  ...........epWFHGKlsrreaeALLQl.....ngDFLVRESTTtp.g
1blj         1  gsvapvetlevekWFFRTisrkdaeRQLLapmnk.agSFLIRESESnk.g
1shd         1  .......siqaeeWYFGKitrreseRLLLnaenp.rgTFLVRESEA....
1lkkA        1  ........lepepWFFKNlsrkdaeRQLLapgnt.hgSFLIRESESta.g
1aya         1  ..........mrrWFHPNitgveaeNLLLtrgv..dgSFLARPSKSnp.g
1csy         1  .......shekmpWFHGKisreeseQIVLigskt.ngKFLIRARDNn..g
1bfi         1  .......hhdektWNVGSsnrnkaeNLLRgkr...dgTFLVRESSKq..g
1gri         1  .......emkphpWFFGKiprakaeEMLSkqrh..dgAFLIRESESap.g
1bcpD        1  ..........dvpYVLVKt......NMVVt.......SVAMKPYEVtp.t

lnk_rat     39  eYVLTFNLq.........gRAKHLRLVLtergqcrvqh..lhfpsvvDML
crkl_mouse  36  dYVLSVSEn.........sRVSHYIINSlpnrrfkigd..qefdhlpALL
nck_human   35  dFSVSLKAq.........gKNKHFKVQLk.etvycigq..rkfstmeELV
ht16_hydat  36  dYVLSMMFr.........sQILHFQINClgdnkfsidng.pifqgldMLI
pip5_human  36  sYAITFRAr.........gKVKHCRINRdg.rhfvlgts.ayfeslvELV
fer_human   32  eYVLSVYSd.........gQRRHFIIQYv.dnmyrfeg..tgfsnipQLI
fps_drome   35  qIVLSVCW..........nGHKHFIVQTtgegnfrfeg..ppfasiqELI
ctk_rat     36  dYVLCVSFg.........rDVIHYRVLHr.dghltidea.vcfcnlmDMV
1ab2        36  qRSISLRYe.........gRVYHYRINTasdgklyvsse.srfntlaELV
2pna        40  dYTLTLRKg.........gNNKLIKIFHr.dgkygfsdp.ltfnsvvELI
1mil        34  qYVLTGLQs.........gQPKHLLLVDp.egvvrtkd..hrfesvsHLI
1blj        49  aFSLSVKDittq.....geVVKHYKIRSldnggyyispr.itfptlqALV
1shd        39  .YCLSVSDfdnak....glNVKHYKIRKldsggfyitsr.tqfnslqQLV
1lkkA       41  sFSLSVRDfdqnq....geVVKHYKIRNldnggfyispr.itfpglhELV
1aya        38  dFTLSVRRn.........gAVTHIKIQN..tgdyydlyggekfatlaELV
1csy        41  sYALCLLHe.........gKVLHYRIDKdktgklsipeg.kkfdtlwQLV
1bfi        39  cYACSVVVd.........gEVKHCVINKtatg.ygfaepynlysslkELV
1gri        41  dFSLSVKFg.........nDVQHFKVLRdgagkyflwv..vkfnslnELV
1bcpD       27  rMLVCGIAaklgaaasspdAHVPFCFGKd....lkrpg.....sspmEVM

lnk_rat     78  RHFqrs...
crkl_mouse  75  EFYkih...
nck_human   73  EHYkka...
ht16_hydat  76  SYYkvis..
pip5_human  75  SYYekh...
fer_human   70  DHHyttk..
fps_drome   73  MHQyhse..
ctk_rat     75  EHYtrdk..
1ab2        76  HHHstva..
2pna        79  NHYrn....
1mil        72  SYHmdnhl.
1blj        93  QHYskkg..
1shd        83  AYYskha..
1lkkA       86  RHYtnas..
1aya        77  QYYmehh..
1csy        81  EHYsyka..
1bfi        79  LHYqhtslv
1gri        80  DYHrsts..
1bcpD       68  LRAvfmqq.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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