1adj - reference 1
Name histidyl-trna synthetase
Number of sequences 4
Alignment Length 421
Longest Sequence 418
Shortest Sequence 404
Average Percent Identity 35
Maximum Percent Identity 40
Minimum Percent Identity 29
Sequence Name SWISSPROT Accession
syh_mycle P46696
syh_porpu P51348
syh_streq P30053
syh_mycge P47281
Family syh_mycle syh_porpu syh_streq syh_mycge
syh_mycle 1 sfsgPKGIPDYFPPDSAQFVAVRDGLLTAArrrGYGDIELPVFEDTALFA
syh_porpu 1 ..qaIRGTKDILPDEQLYWQFIHEKVASLLkyaNYKEIKTPIFENSDLYD
syh_streq 1 ..qkPKGTQDILSVAAAKWQYVEGVARETFkqyHYGEIRTPMFEHYEVIS
syh_mycge 1 ..qkPRGVKDWFGDELVYFNWIVKKIRSLAfnwGFSEVKTPLFENAQLFQ
syh_mycle 51 RGVGESTDVVAKEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGLdr..ga
syh_porpu 49 RGIGENTDIVNKEMYRFNDRSNRDITLRPEGTAGVVRAFIENRMdv..qn
syh_streq 49 RSVGDTTDIVTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLfapevq
syh_mycge 49 R.SNANADIVQKELYQFFDKSQRELALRPEATTPIVRLACENKLmq.ean
syh_mycle 99 LPVKLCYAGPFFRYERPQAGRCRQLQQVGVEAIGVDDPALDAEVITIADA
syh_porpu 97 RLQKLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSSDARADAEIIHLAMN
syh_streq 99 KPVKLYYIGSMFRYERPQAGRLREFHQIGVECFGSANPATDVETIAMAYH
syh_mycge 97 FPLKLFCIGSMYRYERPQNNRFREHWQFSCEVFGFSNLFIFLDTLLFANS
syh_mycle 149 GFRSLGLDGFQLEITSLGDGTCRPQYRKLLQEFLl..qldLDEDTRRRAE
syh_porpu 147 IFNDLSVNDLQLDINSIGKAEDRNHYQAKLQEYLeqyyddLDTDSQNRLS
syh_streq 149 LFERLGIKGVTLHLNSLGNAASRAAYRQALIDYLspmrdtLSKDSQRRLD
syh_mycge 147 LLEALGITGYVLKINNLANFETLSKWNKALKDYLtpykleLTELSQKRLE
syh_mycle 197 LNPLRVLDDKRPQVQAMTAAAPVLLDHLSDGAKQHFDTVLAHLDALRVPY
syh_porpu 197 SNPIRILDTKNKYTQTILNDSPRISDFLSLESEKHFDDVCDYLTLLNVPY
syh_streq 199 ENPLRVLDSKEKEDKIAVANAPSILDYQDEESQAHFDAVRSMLEALAIPY
syh_mycge 197 KNPLRILDDKIDQKKSFVKNAPKITDFLDASAKQDSELLKTQLKKHNISF
syh_mycle 247 VINPRMVRGLDYYTKTTFEFvhpglgaQSGIGGGGRYDGLMRQLGGQDLS
syh_porpu 247 KINTQLVRGLDYYNDTAFEIkilksqgQDTLCGGGRYDSLIHQLGGNKTP
syh_streq 249 VIDTNMVRGLDYYNHTIFEFitevdqsELTICAGGRYDGLVEYFGGPATP
syh_mycge 247 EWTDNLVRGLDYYTGFVFEYvkn....QDTILAGGVYDNLVEELSSNPTP
syh_mycle 297 GIGFGLGVDRTLLALHAEgk.tVGETTRCDVFGVSLGEAAKLKVAMLAGQ
syh_porpu 297 AVGCAIGLER.LLLVAKDn..iLLPHMSIDCYIVSKGIKARKIGIIITQF
syh_streq 299 GFGFGLGLERLLLILDKQgv.eLPVEEGLDVYIAVLGADANVAALALTQA
syh_mycge 293 ALGFACGIERLINCLEIDkkafILNTKPKQMLVICLFEEALEELVWLAKL
syh_mycle 346 LRAAGVRVDLIYGDRGIRGAMRAAGRSGARIALIVDDCAIKADGVGVRDL
syh_porpu 344 LRNQLVKTELDISSSNFGKQLKQAHKKRAIACLILGDNEIQQETITIKWM
syh_streq 348 IRRQGFTVERDYLGRKIKAQFKSADTFKAKVVITLGESEIKAGQAVLKHN
syh_mycge 343 WREY.NQVTIYPKVIKVDNGIRLANRLGYTFIGIVGKTDFDKKAITIKNL
syh_mycle 396 ATGEQISVAVdsvvaevisri
syh_porpu 394 YTQEQENMSIiefknki....
syh_streq 398 QTRQEMTVSFdqiqtdfasif
syh_mycge 392 VSKQQTIYTWnel........
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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