1gdoA - reference 1


Name                 glucosamine 6-phosphate synthase									

Number of sequences              4
Alignment Length                 278
Longest Sequence                 265
Shortest Sequence                234
Average Percent Identity         30
Maximum Percent Identity         39
Minimum Percent Identity         23

Sequence Name    SWISSPROT Accession
GLMS_BACSU           P39754         
PUR1_VIGAC           P52419         
PUR1_RAT             P35433         
1ecfA                P00496         

Family   GLMS_BACSU PUR1_VIGAC PUR1_RAT
Family   1ecfA


GLMS_BACSU   1  CGIVGYIGQLD......akeILLKGLEKLEYRGYDSAGIAVANe...qgI
PUR1_VIGAC   1  CGVVGIYGDPE......asrLCSLALHALQHRGQEGAGIVAVHd...nlF
PUR1_RAT     1  CGVFGCIASGDwptqldvphVITLGLVGLQHRGQESAGIVTSDgssvpkF
1ecfA        1  CGIVGIAGVMP......vnqSIYDALTVLQHRGQDAAGIITIDan..ncF

GLMS_BACSU  42  HVFKEKGRIADLrevvdan..VEAKAGIGHTRWATHGEPSYLNAHPHqs.
PUR1_VIGAC  42  HQVNGVGLVSDVfneaklse.LPGSCAIGHVRYSTAGHSKLVNVQPFvag
PUR1_RAT    51  RVHKGMGLVNHVftednlkklYVSNLGIGHTRYATTGKCELENCQPFvve
1ecfA       43  RLRKANGLVSDVfearhmqr.LQGNMGIGHVRYPTAGSSSASEAQPFyvn

GLMS_BACSU  89  .algrFTLVHNGVIENYVQLKQEYLQD..veLKSDTDTEVVVQVIEqfvn
PUR1_VIGAC  91  yrfgsVAVAHNGNFVNYRSLRAKLEDNg.siFNTTSDTEVVLHLIAtsk.
PUR1_RAT   101  tlhgkIAVAHNGELVNAARLRKKLLRHg.igLSTSSDSEMITQLLAytpp
1ecfA       92  spyg.ITLAHNGNLTNAHELRKKLFEEkrrhINTTSDSEILLNIFAseld

GLMS_BACSU 136  g.......gleteeafrktltlLKGSYAIALFDNDnreTIFVAKN...ks
PUR1_VIGAC 139  ........hrpfllrvvdacenLKGAYSLVFLTED...KLVAVRD.fgfr
PUR1_RAT   150  qeqd...dtpdwvariknlmkeAPAAYSLVIMHRD...VIYAVRDpygnr
1ecfA      141  nfrhypleadnifaaiaatnrlIRGAYACVAMIIGh..GMVAFRDpngir

GLMS_BACSU 176  PLLVGlgdtf...............nVVASDAMAMLQVTNEYV.ELMDKE
PUR1_VIGAC 177  PLVMGrrknga..............vVFASETCALDLIDATYEREVNPGE
PUR1_RAT   194  PLCIGrlmpvsdindkekkssetegwVVSSESCSFLSIGARYCHEVKPGE
1ecfA      189  PLVLGkrdiden.........rte.ymvasesvaldtlgfdflrdvapge

GLMS_BACSU 210  MVIVTDdqvviknldgdvitrasyiael
PUR1_VIGAC 213  VVVVDHtgiqslclv.....thqepkq.
PUR1_RAT   244  IVEISRhgvrtldii...prsngdp...
1ecfA      229  aiyiteegqlftrqcadnpvsnpc....

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index