1aboA - reference 2


Name                 sh3			

Number of sequences              16
Alignment Length                 89
Longest Sequence                 80
Shortest Sequence                49
Average Percent Identity         26
Maximum Percent Identity         62
Minimum Percent Identity         6

Sequence Name    SWISSPROT Accession
1aboA                P00520         
1ark                 Q15346         
1gbq                 Q60631         
1ckb                 Q64010         
1gfc                 P29354         
1hsp                 P19174         
1aey                 P07751         
1csk                 P41240         
1ad5                 P08631         
1awj                 Q03526         
1efn                 P06241         
1sem                 P29355         
1ycsB                P04637         
1pht                 P27986         
1vie                 P00383         
1ihvA                P12497         

Family   1aboA 1ark 1gbq 1ckb 1gfc 1hsp 1aey 1csk 1ad5 1awj 1efn 1sem 1ycsB 1pht
Family   1vie
Family   1ihvA


1aboA        1  .........NLFVALYdfvasgdntlsitkGEKLRVL.gynhn.......
1ark         1  ......tagKIFRAMYdymaadadevsfkdGDAIINV.qaid........
1gbq         1  .........MEAIAKYdfkataddelsfkrGDILKVLneecd........
1ckb         1  ........aEYVRALFdfngndeedlpfkkGDILRIR.dkpe........
1gfc         1  .......gsTYVQALFdfdpqedgelgfrrGDFIHVM.dnsd........
1hsp         1  ...gsptfkCAVKALFdykaqredeltfikSAIIQNV.ekqe........
1aey         1  .......gkELVLALYdyqeksprevtmkkGDILTLL.nstn........
1csk         1  ........gTECIAKYnfhgtaeqdlpfckGDVLTIV.avtkd.......
1ad5         1  .......edIIVVALYdyeaihhedlsfqkGDQMVVL.ees.........
1awj         1  rrsfqepeeTLVIALYdyqtndpqelalrcDEEYYLL.dsse........
1efn         1  .........ALFVALYdyeaiteddlsfhkGEKFQIL.nsse........
1sem         1  .......etKFVQALFdfnpqesgelafkrGDVITLI.nkdd........
1ycsB        1  ........kGVIYALWdyepqnddelpmkeGDCMTII.hredede.....
1pht         1  ........gYQYRALYdykkereedidlhlGDILTVN.kgslvalgfsdg
1vie         1  .........drvrkks.........gaawqGQIVGWY.ctnlt.......
1ihvA        1  .........nfrvyyrdsrd......pvwkGPAKLLW.kg..........

1aboA       34  .......GEWCEAQtK..NGQGWVPSNYITPVN......
1ark        36  .......EGWMYGTvQRTGRTGMLPANYVEAI.......
1gbq        34  .......QNWYKAEl..NGKDGFIPKNYIEMKP......
1ckb        34  .......EQWWNAEd.SEGKRGMIPVPYVEKY.......
1gfc        35  .......PNWWKGAc..HGQTGMFPRNYVTPV.......
1hsp        39  .......GGWWRGDy.GGKKQLWFPSNYVEEMV......
1aey        35  .......KDWWKVEv..NDRQGFVPAAYVKKL.......
1csk        35  .......PNWYKAKn.KVGREGIIPANYVQKR.......
1ad5        34  .......GEWWKARsLATRKEGYIPSNYVARVD......
1awj        42  .......IHWWRVQd.KNGHEGYAPSSYLVEKS......
1efn        33  .......GDWWEARsLTTGETGYIPSNYVAPV.......
1sem        35  .......PNWWEGQl..NNRRGIFPSNYVCPY.......
1ycsB       37  .......IEWWWARl..NDKEGYVPRNLLGLYP......
1pht        42  qearpeeIGWLNGYnETTGERGDFPGTYVEYIGrkkisp
1vie        25  ......pegyaveseahpgsvqiypvaalerin......
1ihvA       25  .......egavviqd..nsdikvvprrkakiird.....

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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