1fkj - reference 1


Name                 immunophilin		

Number of sequences              5
Alignment Length                 115
Longest Sequence                 110
Shortest Sequence                98
Average Percent Identity         44
Maximum Percent Identity         52
Minimum Percent Identity         38

Sequence Name    SWISSPROT Accession
fkba_ecoli           P45523         
fkb2_yeast           P32472         
fkbb_ecoli           P39311         
fkb3_bovin           P26884         
mip_chltr            P26623         

Family   fkba_ecoli fkb2_yeast fkbb_ecoli fkb3_bovin mip_chltr


fkba_ecoli   1  glvyqvveagkgea.pkdsDTVVVNYKGTLID.GKEFDNSYT.......r
fkb2_yeast   1  ...ikripvedclikampgDKVKVHYTGSLLESGTVFDSSYS.......r
fkbb_ecoli   1  glqfrvinqgegai.partDRVRVHYTGKLID.GTVFDSSVA.......r
fkb3_bovin   1  ....svlkkgdktnfpkkgDVVHCWYTGTLQD.GTVFDTNIQtsskkkkn
mip_chltr    1  .lqyrvvkegtgrv.lsgkPTALLHYTGSFID.GKVFDSSEK.......n

fkba_ecoli  42  gePLSFRld..GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGvpg..I
fkb2_yeast  41  gsPIAFElgvgRVIKGWDQGVAGMCVGEKRKLQIPSSLAYGERGvpg.vI
fkbb_ecoli  42  gePAEFPvn..GVIPGWIEALTLMPVGSKWELTIPQELAYGERGaga.sI
fkb3_bovin  46  akPLSFKvgigKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGqpdakI
mip_chltr   41  kePILLPlt..KVIPGFSQGMQGMKEGEVRVLYIHPDLAYGTAGq....L

fkba_ecoli  88  PPNSTLVFDVELLDv
fkb2_yeast  90  PPSADLVFDVELVDv
fkbb_ecoli  89  PPFSTLVFEVELLEi
fkb3_bovin  96  PPNAKLIFEVELVDi
mip_chltr   85  PPNSLLIFEVKLIE.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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