2pia


MSF format
Number of sequences              28
Alignment Length                 368
Longest Sequence                 294
Shortest Sequence                207

Repartition                      H19/H6/H1/H1/H1
Average Percent Identity         29
Maximum Percent Identity         78
Minimum Percent Identity         13

2pia_2            1  .....pqedgflrlkiaskekiar.....diwsfeltdpqgaplppfeag
vanb_pses9        1  ..........mldlmirglrleap.....gilglelvatdgsplptfeag
1fdr_2            1  ........adwvtgkvtkvqnwt......dalfsltv...hapvlpftag
1fnc_2            1  tvnkfk.pktpyvgrcllntkitgddapgetwhmvfs...hegeipyreg
fenr_cyapa        1  plnlfr.panpyigkciynerivgegapgetkhiift...hegkvpyleg
fenr_spisp        1  pvniyk.pknpyigkclsneelvreggtgtvrhlifdi..sggdlryleg
fens_orysa        1  .lntyk.pkepytativsverivgpkapgetchivid...hggnvpyweg
fenr_anaso        1  pvnlyr.pnapfigkvisneplvkeggigivqhikfdl..tggnlkyieg
fenr_chlre        1  plntys.nkapfkakvrsvekitgpkatgetchiiie...tegkipfweg
1ndh_2            1  paitlenpdikyplrlidkevvnh.....dtrrfrfalpspehilglpvg
nia2_brana        1  ..ialvnprekvpvtliektsish.....dvrrfrfalpsedqqlglpvg
nia1_maize        1  .apalsnprekihcrlvgkkelsr.....dvrlfrfslpspdqvlglpig
nia_volca_1       1  .plvvlnprqkvklplierielnr.....ntrifrfglpspqhriglpvg
nia_cicin_1       1  pkeiaptrrekipcklisktsvsh.....dvrlfrfalpspdqvlglpvg
nia7_horvu_1      1  .avalanprekvrcrlvdkksmsh.....nvrlfrfalpspdqklglpvg
nia3_maize        1  pvialsnprekvpcqlvartvlsr.....dvrlfrfalpssgqvlglpvg
nia1_soybn        1  .......prekipcklisktsish.....dvrlfrfglpsdgllmglavg
nia_betve         1  .......pgakiptklvykkslsh.....dvrlfrlalpsddqvlglpvg
nia_phyin_1       1  ..........kvpivlisrevvsh.....darifkfalpakdlrlglpig
nc5r_yeast_1      1  .............fplvektilth.....ntsmykfglphaddvlglpig
nia_emeni_1       1  prptfltpkawtkatltkktsvss.....dthiftlslehpsqalglptg
nia_lepmc_1       1  lrptfldsrtwskallssktkvsw.....dtrifrfkldhasqtlglptg
nia_aspng_1       1  pratflqskswtkatlvkrtdvsw.....dtriftfqlqhdkqtlglpig
mcr1_yeast_1      1  ....fkgddkwidlpiskieeesh.....dtrrftfklptedsemglvla
nia_fusox_1       1  ...............ldkktsisp.....dtkifsfklnheaqkiglptg
nia_neucr_1       1  ...............ltfkesvsp.....dtkifhfalshpaqsiglpvg
nia_ustma_1       1  ....fldpkkwratrlgeqanhsp.....darifrfalgsedqelglpwp
nia_beaba_1       1  ....flqpkywskailetktdvss.....dskifsfrldhaaqsiglptg

2pia_2           41  anltvavpn..........gsrrtyslcndsqe......rnryviavkrd
vanb_pses9       36  ahldlhlpg..........glvrpyslcnapge......thryclavlld
1fdr_2           34  qftklglei..........rvqraysyvnspdn.....pdlefylvtvp.
1fnc_2           47  qsvgvipdged...kngkphklrlysiassalgdfgdaksvslcvkrliy
fenr_cyapa       47  qsigiippgtd...kdgkphklrlysiastrhgdfgddktvslsvkrley
fenr_spisp       48  qsigiippgtd...nngkphklrlysiastrhgdhvddktvslcvrqley
fens_orysa       46  qsygiippgen.pkkpgaphnvrlysiastrygdsfdgrttslcvrravy
fenr_anaso       48  qsigiippgvd...kngkpeklrlysiastrhgddvddktislcvrqley
fenr_chlre       47  qsygvippgtkinskgkevptarlysiassrygddgdgqtaslcvrravy
1ndh_2           46  qhiylsari.......dgnlvirpytpvssddd....kgfvdlvikvyfk
nia2_brana       44  khiflcani.......ndklclraytptstvda....vghidlvvkvyfk
nia1_maize       45  khifvcasi.......egklcmraytptsmvde....ighfdllvkvyfk
nia_volca_1      45  khvftyati.......ngenvmraytpisgdee....lgrldmlikvyfa
nia_cicin_1      46  khvfvcati.......ddklcmraytptstide....vgyfellvkiyfk
nia7_horvu_1     45  khvyvcast.......ggklcmraytptssvee....vghvellikiyfk
nia3_maize       46  khifvcasi.......dgklcmraytptssvde....vghfdllvkvyfr
nia1_soybn       39  khiflcvtv.......deklcmraytptssvhe....vgyfdlvvkvyfk
nia_betve        39  khvflcati.......ddklcmraytptstide....vgyldlvvkiyfk
nia_phyin_1      36  nhvflyaki.......ngktavraytpissended..rgfvsflikvyfa
nc5r_yeast_1     33  qhivikani.......ngkditrsytptsldgdt...kgnfellvksyp.
nia_emeni_1      46  qhlmlktpdp...kssssgsiirsytpispsdq....lgmvdilikiyae
nia_lepmc_1      46  qhlmirlrdp.....vtreaiirsytpisqise....qgfcdvlikiyad
nia_aspng_1      46  qhlmikvadp.....tskeaiirsytpisdtnq....egtmdllvkiyfd
mcr1_yeast_1     42  salfakfvtp......kgsnvvrpytpvsdlsq....kghfqlvvkhy..
nia_fusox_1      31  qhlmmrlrdp.....atreaiirsytpysdgsd....cgrldilikiyyd
nia_neucr_1      31  qhlmmrlpdp....akptesiiraytpisdgtle...rgtlrvlvkiyya
nia_ustma_1      42  aalrlslekr...rtgeaemvqraytpysgntq....rgfldilikvyfp
nia_beaba_1      42  qhllvrlrdp.....atreaviraytplsetha....kgqldilikiyrd

2pia_2           75  sn........grggsis.fiddtsegd.....avevslprnefpld....
vanb_pses9       70  pa........srggsra.vheqlrvgq.....hlttsaprnlfplv....
1fdr_2           68  ............dgklsprlaalkpgd.....evqvvseaagffvld...
1fnc_2           94  tnd....agetikgvcsnflcdlkpga.....evkltgpvgkemlmp...
fenr_cyapa       94  tda....ngnlvkgvcsnylcdlkpgd.....evmitgpvgttmlmp...
fenr_spisp       95  khpe...tgetvygvcstylcnleaga.....dvaitgpvgkemllp...
fens_orysa       95  ydpetgkedpskngvcsnflcnskpgd.....kvkvtgpsgkimllp...
fenr_anaso       95  khpe...sgetvygvcstylthiepgs.....evkitgpvgkemllp...
fenr_chlre       97  vdpetgkedpakkglcsnflcdatpgt.....eismtgptgkvlllp...
1ndh_2           85  dthp....kfpaggkmsqylesmkigd.....tiefrgpngllvyqgkgk
nia2_brana       83  dvhp....rfpngglmsqhldslpigs.....vlnikgplghieylgkgn
nia1_maize       84  nehp....kfpngglmtqyldslpvgs.....yidvkgplghveytgrgs
nia_volca_1      84  nehp....afpdggkmsqhfeslrigd.....tvefkgplghfvydgrgs
nia_cicin_1      85  gvep....kfpngglmsqhlesmelgs.....sieikgplghieymgrgt
nia7_horvu_1     84  dedp....kfpagglmsqyldalplga.....pvdikgpvghieyagrga
nia3_maize       85  nent....kfpdggrmtqyldslpvga.....hvdvkgplghveyvgrgg
nia1_soybn       78  gvhp....kfpnggimsqhldslpigs.....vldvkgplghieytgrgn
nia_betve        78  nsnp....rfpngglmsqhldslpigs.....vlhvkgplghveytgrgn
nia_phyin_1      77  gdnp....vhpegglfsqyldglhlgq.....qiqikgplghftyygdgn
nc5r_yeast_1     72  ............tgnvskmigelkigd.....siqikgprgnyhyern..
nia_emeni_1      89  tp.......sipggkmttaldtlplgs.....vieckgptgrfeyldrgr
nia_lepmc_1      87  ap.......greggkmtkaldsipcgh.....wvdmkgpigkfeylgkgv
nia_aspng_1      87  tp.......tvkggkmtmaleklalgs.....eidckgptgrfeylgngk
mcr1_yeast_1     80  ...........eggkmtshlfglkpnd.....tvsfkgpimkwkwqpnq.
nia_fusox_1      72  tp.......qrkggvmtqaldalpigh.....wvdfkgptgkfvyhgngl
nia_neucr_1      74  sp.....tedikggqmtqaldalalgk.....avefkgpvgkfvyqgrgv
nia_ustma_1      85  sdaaatsapafeggkmtmllekidvsspsddltielkgplgsftylgqqq
nia_beaba_1      83  vp.......gqpggkmtqaldsiplgh.....fvdikgpvgkfeylgkgh

2pia_2          107  .............kraksfilvaggigitpmlsmarqlrae.........
vanb_pses9      102  .............aessrsllfaggigitpilamaqvlaar.........
1fdr_2           98  ...........evphcetlwmlatgtaigpylsilrlgkd..........
1fnc_2          132  ............kdpnatiimlgtgtgiapfrsflwkmffek......hd
fenr_cyapa      132  ............edqsatiimlatgtgiapfrsflrrmfeet......ha
fenr_spisp      134  ............ededatiimmatgtgiapfraflwrifkeq......he
fens_orysa      137  ...........eedpnathimiatgtgvapfrgylrrmfmed......vp
fenr_anaso      134  ............ddpeanvimlatgtgiapmrtylwrmfkdaeraa..np
fenr_chlre      139  ............adanaplicvatgtgiapfrsfwrrcfien......vp
1ndh_2          126  fairpdkksspviktvksvgmiaggtgitpmlqviraimkd.........
nia2_brana      124  fmvtgkp......kfakklamlaggpgitpiyqviqsilsd.........
nia1_maize      125  fvingkq......rhasrlamicggsgitpmyqiiqavlrdq........
nia_volca_1     125  ytlngklh.....khathmsfvaggtgitpcyavikaalrd.........
nia_cicin_1     126  fsvhgkq......kfarklamfaggtgitpdlssdasylkd.........
nia7_horvu_1    125  ftvgger......rfarrlamvaggtgitpvyqviqavlrdq........
nia3_maize      126  fvidgkp......rkagrlamvaggsgitpiyqviqavlrdq........
nia1_soybn      119  flvhgkp......rfatrlamlaggtgitpiyqvvqailkd.........
nia_betve       119  flvhgep......kfakrlamvaggtgitpiyqviqailkd.........
nia_phyin_1     118  fslettn......fhaykfgfvaggtgitpvyqvmrailed.........
nc5r_yeast_1    103  ..............crshlgmiaggtgiapmyqimkaiamd.........
nia_emeni_1     127  vlisgke......rfvksfvmicggtgitpvfqvlravmqd.........
nia_lepmc_1     125  csingne......rrvrsmkmicggsgitpiyqvlrailqd.........
nia_aspng_1     125  ilvsgke......rhvssfkmicggtgitpifqvlravmqd.........
mcr1_yeast_1    113  ...............fksitllgagtginplyqlahhiven.........
nia_fusox_1     110  ctineke......rrvrrfimvcggsgitpirqvlravidn.........
nia_neucr_1     114  csvngre......rkvkrfvmvcggsgvtpiyqvaeavavd.........
nia_ustma_1     135  irwkpas.....acslrklamiaggsgitpiwstlkaiadevldasnpss
nia_beaba_1     121  ctvsgts......rhvrrfvmicagsgvtpifqvlravtsd.........

2pia_2          135  ...glrsfrlyyltrdpegtaffdeltsde.........wrsdvkihhd.
vanb_pses9      130  ...gd.tfelhycvrsrrlaafidwleast.........faahvhlhad.
1fdr_2          127  .ldrfknlvlvhaaryaadlsylplmqelekry...egklriqtvvsre.
1fnc_2          164  dykfnglawlflgvptsssllykeefekmkeka...pdnfrldfavsre.
fenr_cyapa      164  dykfnglawlflgvptsstllyreelekmqkan...pnnfrldyaisre.
fenr_spisp      166  dykfkglawlffgipyspnilyqqeleelqeef...penfrltlaisre.
fens_orysa      170  kyrfgglawlflgvantdsllydeeftsylkqy...pdnfrydkalsre.
fenr_anaso      170  eyqfkgfswlvfgvpttpnilykeeleeiqqky...pdnfrltyaisre.
fenr_chlre      171  sykftglfwlfmgvgnsdaklydeelqaiakay...pgqfrldyalsre.
1ndh_2          167  .pddhtvchllfanqtekdillrpeleelrneh...sarfklwytvdra.
nia2_brana      159  .pedetemfvvyanrteddilvreelegwankh...kdrlkvwyvveia.
nia1_maize      161  .pedhtemhlvyanrteddillrdeldrwaaey...pdrlkvwyvidqvk
nia_volca_1     161  .pedktqislvfannteedillreeldelannh...pdrfhlwhtvsqtn
nia_cicin_1     161  .peddtemyvvyanrteddillreeldawadky...sdrvkvwyvvaksi
nia7_horvu_1    161  .pddttemhlvyanrteddmllreeidrwaaan...parlkvwyvvskvg
nia3_maize      162  .pedktemhlvyanrteddillraeldrwaaey...perlkvwyvvsqvk
nia1_soybn      154  .pedctemhvvyanrteddillkeeldew.akk...ydrlkvwyviqesi
nia_betve       154  .pedetemfvvyanrteddillreelddwakkh....eklkvwyvvkesk
nia_phyin_1     153  .akdqtkvaliycvrsqrdlllrkeletlqklr...pgqcrifytlsdme
nc5r_yeast_1    130  .phdttkvslvfgnvheedillkkelealvamk...psqfkivyyldspd
nia_emeni_1     162  .eqdetkcvmldgnrleedillkneldefealagk.kekckivhtltkg.
nia_lepmc_1     160  .sadsthctvlngnrleedilcredldrfaeen...gerctlvhtltqa.
nia_aspng_1     160  .kqdptscvvldgnrqeedilcradldayeald...skkckvvhtltka.
mcr1_yeast_1    139  .pndktkvnllygnktpqdillrkeldalkeky...pdkfnvtyfvddkq
nia_fusox_1     145  .pkdttpclvfngnrsvndilcmeeleeleaan...psrcrvvnalsnp.
nia_neucr_1     149  .dqdgteclvldgnrvegdilmkseldelverakp.mgrcrvkytlsrp.
nia_ustma_1     180  paldpiqiwivygnrteqdilireeldal.srl...kgnlkvwhvlsnc.
nia_beaba_1     156  .aqdgteclvldgnrcekdilcreeldamvara...parttllhklsrp.

2pia_2          172  ..........hgdptkaf..........dfwsvfeksk............
vanb_pses9      166  ............dgptpf..........datallrda.............
1fdr_2          172  .........taagsltgripaliesgelestiglpmnk............
1fnc_2          210  ........qtnekgekmyiqtrmaqyavelwemlkk..............
fenr_cyapa      210  ........qtdskgekmyiqnriaeyanefwnmiqk..............
fenr_spisp      212  ........qqnpeggkmyiqdrikenadqlweliqk..............
fens_orysa      216  ........qknknagkmyvqdkieeysdeifklld...............
fenr_anaso      216  ........qknpqggrmyiqdrvaehadelwqlikn..............
fenr_chlre      217  ........qnnrkggkmyiqdkveeyadeifdlld...............
1ndh_2          212  ........peawdysqgfvne......emirdhlpppe............
nia2_brana      204  ........kegwnystgfite......pvlrehvpegle...........
nia1_maize      207  rp......eegwkysvgfvte......avlrehvpegg............
nia_volca_1     207  ........ssdwkfstgrvtl......emfkqhlfacsg...........
nia_cicin_1     207  ........regwkysegfite......dimrehvpevs............
nia7_horvu_1    207  rp......edaweygvgrvde......qvlrehlplggd...........
nia3_maize      208  r.......ldewkysvgivte......avlrddvpear............
nia1_soybn      199  ........regweysvgfite......siltehipnas............
nia_betve       199  ........regweysvgyire......silrehipegs............
nia_phyin_1     199  lldrndpivrgwaygksrlnf......amvkniigsda............
nc5r_yeast_1    176  ........redwtggvgyitk......dvikehlpaat............
nia_emeni_1     209  ........seswtgrrgride......elirqhagtpd............
nia_lepmc_1     205  ........aegwtgrrgrige......ellkefcg.te............
nia_aspng_1     205  ........pdswtgrrgrise......dllkehai.pd............
mcr1_yeast_1    185  d.......dqdfdgeisfisk......dfiqehvpgpk............
nia_fusox_1     190  ........ppewnglkgfvnq......alvpeymdlpkasge........
nia_neucr_1     196  ........gaeweglrgrldk......tmlerevgegdlr..........
nia_ustma_1     225  ........tpeneanwsmgrg......islpmslgapatnhrqscfggde
nia_beaba_1     201  ........daswcglrgrmdk......eyleehiggfrksd.........

2pia_2          190  .paqhvyccgpqalmdtvr.............dmtg........hwp...
vanb_pses9      181  .gdahlyvcgpggfmehvl.............gcarta......gwd...
1fdr_2          201  .etshvmlcgnpqmvrdtq.............qllketr........qmt
1fnc_2          238  .dntyvymcglkgmekgid.............dimvslaaaegidwieyk
fenr_cyapa      238  .pntfvymcglrgmedgiq.............qcmediakangttwdavv
fenr_spisp      240  .pnthtyicglkgmeggid.............egmsaaagkfdvdwsdyq
fens_orysa      243  .ggahiyfcglkgmmpgiq.............dtlkkvaeqrgesweqkl
fenr_anaso      244  .qkthtyicglrgmeegid.............aalsaaaakegvtwsdyq
fenr_chlre      244  .ngahmyfcglkgmmpgiq.............dmlervakekglnyeewv
1ndh_2          236  .eeplvlmcgpppmiqyac............lpnlerv....ghpkercf
nia2_brana      229  .geslalacgpppmiqfal............qpnlekm....gynvkedl
nia1_maize      233  .ddtlalacgpppmiqfai............spnlekm....kydmansf
nia_volca_1     232  .peclalmcgppamlehcc............vpflesm....gyskeqmi
nia_cicin_1     231  .edtlalacgpppmiqfai............npnlekm....gydknsll
nia7_horvu_1    234  .getlalvcgppamlectv............rpglekm....gydldkcl
nia3_maize      233  .dgtlallcgppsmiqspi............lpnlekm....khqld...
nia1_soybn      223  .pdtlaltcgpppmiqfav............qpnlekl....gydtqnnl
nia_betve       223  .ddvlalacgapsmieeav............rlnlekm....nydtknsl
nia_phyin_1     231  .ed..vcmcgpegmieyac............kpallkl....nydlk...
nc5r_yeast_1    200  .dnvqilicgppamvasv.............rrstvdl....gfrrskpl
nia_emeni_1     233  .retmvlvcgpeamekas.............kkillsl....gwkeenlh
nia_lepmc_1     228  .edglvlvcgpeglersv.............kgllsgm....awrdddvi
nia_aspng_1     228  .gksmvlicgpeameksa.............rkilleq....gwasdlhf
mcr1_yeast_1    210  .esthlfvcgpppfmnaysgekkspkdqgeligilnnl....gyskdqvf
nia_fusox_1     218  .gdelllvcgpppmvkav.............easflgm....gfkddfvf
nia_neucr_1     222  .getmvllcgpegmqnmv.............revlkgm....gwkdedvl
nia_ustma_1     261  ledtlalvcgpppmekav.............sdglnel....gwdlqrcv
nia_beaba_1     228  .gremvlvcgpaaleetv.............rsvlvem....awkedmlf

2pia_2          215  ......sgt.vhfesfga
vanb_pses9      208  ......etr.lhreyfaa
1fdr_2          229  khlrrrpgh.mtaehyw.
1fnc_2          274  rqlkkaeq..wnvevy..
fenr_cyapa      274  kglkkekr..whvet...
fenr_spisp      276  kelkkkhr..whvet...
fens_orysa      279  sqlkknkq..whvev...
fenr_anaso      280  kdlkkagr..whvet...
fenr_chlre      280  eglkhknq..whvev...
1ndh_2          269  af................
nia2_brana      262  li................
nia1_maize      266  ..................
nia_volca_1     265  h.................
nia_cicin_1     264  v.................
nia7_horvu_1    267  v.................
nia3_maize      263  ..................
nia1_soybn      256  ..................
nia_betve       256  ..................
nia_phyin_1     259  ..................
nc5r_yeast_1    232  skmedqvfv.........
nia_emeni_1     265  y.................
nia_lepmc_1     260  f.................
nia_aspng_1     260  ..................
mcr1_yeast_1    255  k.................
nia_fusox_1     250  ..................
nia_neucr_1     254  v.................
nia_ustma_1     294  v.................
nia_beaba_1     260  ..................

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

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