1ezm - reference 1


Name                 elastase

Number of sequences              5
Alignment Length                 321
Longest Sequence                 308
Shortest Sequence                297
Average Percent Identity         60
Maximum Percent Identity         73
Minimum Percent Identity         51

Sequence Name    SWISSPROT Accession
NPRE_BACCL           P23384         
NPRE_BACCE           P05806         
NPRE_BACAM           P06832         
NPRE_PAEPO           P29148         
NPRE_BACBR           P43263         

Family   NPRE_BACCL NPRE_BACCE NPRE_BACAM NPRE_PAEPO NPRE_BACBR


NPRE_BACCL   1  ....GVLGDQKYINTTYSSYYGYYYLQDNTR..GSGIFTYDGRNRtv.LP
NPRE_BACCE   1  .tgkGVLGDTKSLNTTLSGSS..YYLQDNTR..GATIFTYDAKNRst.LP
NPRE_BACAM   1  .tgtGTTLKGKTVSLNISSESGKYVLRDLSKPTGTQIITYDLQNReynLP
NPRE_PAEPO   1  atgkGVLGDSKSFTTTASGSS..YQLKDTTR..GNGIVTYTASNRqs.IP
NPRE_BACBR   1  atgkGVLGDTKQFETTKQGST..YMLKDTTR..GKGIETYTANNRts.LP

NPRE_BACCL  44  GSLWADGDNQFFASYDAAAVDAHYYAGVVYDYYKNVHGRLSYDGSNAAIR
NPRE_BACCE  45  GTLWADADNVFNAAYDAAAVDAHYYAGKTYDYYKATFNRNSINDAGAPLK
NPRE_BACAM  50  GTLVSSTTNQFTTSSQRAAVDAHYNLGKVYDYFYQKFNRNSYDNKGGKIV
NPRE_PAEPO  46  GTLLTDADNVWN...DPAGVDAHAYAAKTYDYYKSKFGRNSIDGRGLQLR
NPRE_BACBR  46  GTLMTDSDNYWT...DGAAVDAHAHAQKTYDYFRNVHNRNSYDGNGAVIR

NPRE_BACCL  94  STVHYGRGYNNAFWNGSQMVY..GDGDGQTFLPFSGGidVVGHELTHAVT
NPRE_BACCE  95  STVHYGSNYNNAFWNGSQMVY..GDGDGVTFTSLSGGidVIGHELTHAVT
NPRE_BACAM 100  SSVHYGSRYNNAAWIGDQMIY..GDGDGSFFSPLSGSmdVTAHEMTHGVT
NPRE_PAEPO  93  STVHYGSRYNNAFWNGSQMTYGDGDGDGSTFIAFSGDpdVVGHELTHGVT
NPRE_BACBR  93  STVHYSTRYNNAFWNGSQMVY..GDGDGTTFLPLSGGldVVAHELTHAVT

NPRE_BACCL 142  DYTAGLVYQNESGAINEAMSDIFGTLVEfyanrNPDWEIGEDIytpgVAG
NPRE_BACCE 143  ENSSNLIYQNESGALNEAISDIFGTLVEfydnrNPDWEIGEDIytpgKAG
NPRE_BACAM 148  QETANLNYENQPGALNESFSDVFGYFND.....TEDWDIGEDIt...VSQ
NPRE_PAEPO 143  EYTSNLEYYGESGALNEAFSDVIGNDIQ.....RKNWLVGDDIytpnICG
NPRE_BACBR 141  ERTAGLVYQNESGALNESMSDIFGAMVD.....NDDWLMGEDIytpgRSG

NPRE_BACCL 192  DALRSMSDPAKYGDPDHYSKRY.....tGTQDNGGVHTNSGIINKAAYll
NPRE_BACCE 193  DALRSMSDPTKYGDPDHYSKRY.....tGSSDNGGVHTNSGIINKQAYll
NPRE_BACAM 190  PALRSLSNPTKYGQPDNF.KNYknlpntDAGDYGGVHTNSGIPNKAAYn.
NPRE_PAEPO 188  DALRSMSNPTLYDQPHHYSNLY.....kGSSDNGGVHTNSGIINKAYYll
NPRE_BACBR 186  DALRSLQDPAAYGDPDHYSKRY.....tGSQDNGGVHTNSGINNKAAYll

NPRE_BACCL 237  sqggvhygvSVTGIGRDKMGKIFYRALVYYLTPTSNFSQLRAACVQAAAD
NPRE_BACCE 238  anggthygvTVTGIGKDKLGAIYYRANTQYFTQSTTFSQARAGAVQAAAD
NPRE_BACAM 238  .........TITKIGVNKAEQIYYRALTVYLTPSSTFKDAKAALIQSARD
NPRE_PAEPO 233  aqggtfhgvTVNGIGRDAAVQIYYSAFTNYLTSSSDFSNARAAVIQAAKD
NPRE_BACBR 231  aeggthygvRVNGIGRTDTAKIYYHALTHYLTPYSNFSAMRRAAVLSATD

NPRE_BACCL 287  LYGSTSQEVNSVKQAFNAVGv
NPRE_BACCE 288  LYGANSAEVAAVKQSFSAVGv
NPRE_BACAM 279  LYG..SQDAASVEAAWNAVGl
NPRE_PAEPO 283  LYGANSAEATAAAKSFDAVG.
NPRE_BACBR 281  LFGANSRQVQAVNAAYDAVGv

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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