1pysA - reference 5


Name                 Glycyl-tRNA synthetase

Number of sequences              10
Alignment Length                 412
Longest Sequence                 313
Shortest Sequence                210
Average Percent Identity         25
Maximum Percent Identity         49
Minimum Percent Identity         11

Sequence Name    SWISSPROT Accession
syfa_haein           P43819         
syf_metja            Q57911         
syfa_mycge           P47436         
syfb_yeast           P15625         
syf_sulso            P95961         
syfm_yeast           P08425         
1pysA                P27001         
1aszB                P04802         
1adjA                P56194         
1lylA                P14825         

Family   syfa_haein syf_metja syfa_mycge syfb_yeast syf_sulso syfm_yeast 1pysA 1aszB 1adjA 1lylA


syfa_haein   1  glhpvtmtinrvtKFFSElgfsveng...peiesdyynfdalnipkhhpa
syf_metja    1  kvhpltriirevkEILLAmgfkevks...pivetefwnfdmlfepqdhpa
syfa_mycge   1  snnalyqvidnlvEYFKSflftinfd...seltsisdcfdllnipkdhss
syfb_yeast   1  alhplnkvreefrQIFFSmgftemps..nqyvetgfwnfdalyvpqqhpa
syf_sulso    1  kkhyfreflekvkDIMISlgfkeint...gyiemefynfdllfqpqdhpa
syfm_yeast   1  eshpvgilrdlieKKLNSvdntfkifnnfkpvvttmenfdslgfpkdhpg
1pysA        1  glhpitlmerelvEIFRAlgyqaveg...peveseffnfdalnipehhpa
1aszB        1  ifriqagvcelfrEYLATkkftevht...pkllga.............ps
1adjA        1  elrmhqrivatarKVLEAagalelvt...pifeetqvfekgvg.....aa
1lylA        1  tfvvrskilaairQFMVArgfmevet...pmmqvi.............pg

syfa_haein  48  radh..dtfwfnpe....................................
syf_metja   48  remq..dtfflkypnegdipedllskvkev........hercwkykfden
syfa_mycge  48  rnes..dsfyid......................................
syfb_yeast  49  rdlq..dtfyikdpltadlpddktymdnikavheqgrfgsigyrynwkpe
syf_sulso   48  reih..dsfsvegsgkiedkdllnnvkei.........hekfwkyewkqd
syfm_yeast  51  rsks..dtyyin......................................
1pysA       48  rdmw..dtfwltgegfrl.........................egplgee
1aszB       35  eggs..svfevtyfk...................................
1adjA       43  tdivrkemftfqdrg...................................
1lylA       35  gasa..rpfithhnald.................................

syfa_haein  60  ....lllrtqtsgvqirtmekmqp......pirimapGRVYRND...ydq
syf_metja   88  vsrrlilrthttassirylaslsdeeknk.phkvfciDRVFRNE..aidy
syfa_mycge  58  ..ktsllrthctattlkavrtskktnnp..dirvvslGAVFRND..sdda
syfb_yeast  97  ecqklvlrthstaisarmlhdlakdpk...ptrlfsiDRVFRNE..avda
syf_sulso   87  itlrlmlrsqttattarvlasrpka.....pqkvftlGKVFRPD..aida
syfm_yeast  61  ..ethllrthtsahelecfqkirnds.dniksgflisADVYRRD..eidk
1pysA       71  vegrlllrthtspmqvrymvahtp......pfrivvpGRVFRFE..qtda
1aszB       48  ..gkayl.aqspqfnkqqlivad.......fervyeiGPVFRAEnsnthr
1adjA       58  .grsltlrpegtaamvraylehgmkv.wpqpvrlwmaGPMFRAE..rpqk
1lylA       50  ..ldmylriapelylkrlvvgg........fervfeiNRNFRNE.gisvr

syfa_haein  97  thtpmFHQIEl.lyvdkk.........anftelkgllhdflraffeed..
syf_metja  135  khlpeFYQCEg.iimddn.........vnfnnligvlkeflnrlgfe...
syfa_mycge 102  thshqFTQLDf.mwikkg.........lslanlkwfinnmithffgen..
syfb_yeast 142  thlaeFHQVEg.vladyn.........itlgdlikfmeeffermgv....
syf_sulso  130  thlieFHQLDg.viidnn.........ftfkellgvlkeifyrlgi....
syfm_yeast 106  thypvFHQMEgatiwkrtkadvgvkepmyiekiredirqvenllnkenvk
1pysA      113  theavFHQLEg.lvvgeg.........iamahlkgaiyelaqalfgp...
1aszB       88  .hmteFTGLDm.emafee..........hyhevldtlselfvfifselpk
1adjA      104  gryrqFHQVNy.ealgse.......npildaeavvllyeclkelglrrlk
1lylA       89  .hnpeFTMMEl.ymayad...........yhdlielteslfrtlaqevl.

syfa_haein 135  ..................................................
syf_metja  172  ..................................................
syfa_mycge 140  ..................................................
syfb_yeast 178  ..................................................
syf_sulso  166  ..................................................
syfm_yeast 156  itvdddtiplkennpkqeymsdlevdlcsqhlkrsielivsevfnkkiss
1pysA      150  ..................................................
1aszB      126  rfaheielvrkqypveefklpkdgkmvrltykegiemlraagkeigdfed
1adjA      146  vklssvgdpedrarynaylrevlsphrealsedskerleen.pmrildsk
1lylA      125  ........gttkvtygehvfdfgkpfekltmreaikkyrpetdmadldnf

syfa_haein 135  .........................................lqvrfrpsy
syf_metja  172  ..........................................kvrfrpay
syfa_mycge 140  .........................................tftrfrlsh
syfb_yeast 178  .........................................tglrfkpty
syf_sulso  166  .........................................kevkfkpay
syfm_yeast 206  miknkanntpk.............................elkvrwinay
1pysA      150  ........................................dskvrfqpvy
1aszB      176  lstenekflgklvrdkydt...................dfyildkfplei
1adjA      195  serdqallkelgvrpmldf.lgeearahlkev.erhl..erlsvpyele.
1lylA      167  .daakalaesigitvekswglgrivteifdevaeahliqptfiteypaev

syfa_haein 144  fpfte........psaevdvmg..........kngkwlevlgcgmvh.pn
syf_metja  180  fpfte........psleaevyl..........egkgwleilgagifr.pe
syfa_mycge 149  fpfte........psfeidircwlcqngcsickqtkwieilgagiih.pq
syfb_yeast 187  npyte........psmeifswh.........eglqkwveignsgmfr.pe
syf_sulso  175  fpfte........psveaygyl..........eklgwvemcgagllr.pe
syfm_yeast 227  fpwta........psweievww...........qgewlelcgcglir.qd
1pysA      160  fpfve........pgaqfavww.........peggkwlelggagmvh.pk
1aszB      207  rpfytmpdpanpkysnsydffm............rgeeilsgaqrih.dh
1adjA      240  palvrgld...yyvrtafevhh...........eeigaqsalggggrydg
1lylA      216  splarrndv.npeitdrfeffi.............ggreigngfselnda

syfa_haein 175  vlrnvgidpne.........................ysgfavgmGVERlt
syf_metja  211  vlepigiek............................pvlawgiGFSRla
syfa_mycge 190  vmnnmgigdten........................itgiaagiGIERla
syfb_yeast 219  mlesmglpkd..........................lrvlgwglSLERpt
syf_sulso  206  ilssvgids............................tagawgiGIERla
syfm_yeast 257  vllragykpse.........................tigwafglGLDRia
1pysA      192  vfqavdayrerlglppay................rgvtgfafglGVERla
1aszB      244  allqermkahglspedpglkdycdgfsy......gcpphagggiGLERvv
1adjA      276  lsellgg...........................prvpgvgfafGVERva
1lylA      252  edqaerfqeqvnakaagddeamfydedyvtaleyglpptaglgiGIDRmi

syfa_haein 200  mlrynvtdlrs.
syf_metja  233  mlrygltdird.
syfa_mycge 216  mlkygiddird.
syfb_yeast 243  mikykvqnire.
syf_sulso  228  msflnisdirl.
syfm_yeast 282  mllfeipdirl.
1pysA      226  mlrygipdiry.
1aszB      288  mfyldlknirra
1adjA      299  lal.eaegf...
1lylA      302  mlftnshtirdv

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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