2trx - reference 2


Name                 thioredoxin										

Number of sequences              21
Alignment Length                 111
Longest Sequence                 99
Shortest Sequence                85
Average Percent Identity         34
Maximum Percent Identity         61
Minimum Percent Identity         10

Sequence Name    SWISSPROT Accession
1thx                 P20857         
thio_thife           P52233         
thio_strcl           Q05739         
thio_rhoru           P10473         
thio_myctu           P52229         
thio_gripa           P50338         
thio_rhosh           P08058         
thio_aliac           P80579         
thio_strau           P33791         
thio_haein           P43785         
thi2_corne           P07887         
thio_bacsu           P14949         
thim_pea             P48384         
thih_syny3           P52232         
thio_chlps           P52227         
thih_arath           P29448         
er60_mouse           P27773         
txla_synp7           P35088         
1kte                 P12309         
1grx                 P00277         
2trcP                P20942         

Family   1thx thio_thife thio_strcl thio_rhoru thio_myctu thio_gripa thio_rhosh thio_aliac thio_strau thio_haein thi2_corne thio_bacsu thim_pea thih_syny3 thio_chlps thih_arath er60_mouse txla_synp7
Family   1kte 1grx
Family   2trcP


1thx         1  aeqPVLVYFWASWCGPCQLMSPLINLAantysdrlkVVKLEIdp......
thio_thife   1  sskPVLVDFWAEWCGPCKMIAPILEEIadeyadrlrVAKFNIde......
thio_strcl   1  sekPVLVDFWAEWCGPCRQIAPSLEAIt.ehggqieIVKLNIdq......
thio_rhoru   1  adgPNXVDFWAEWCGPCRQXAPALEELatalgdkvtVAKINIde......
thio_myctu   1  snkPVLVDFWATWCGPCKMVAPVLEEIateratdltVAKLDVdt......
thio_gripa   1  srqPVLVDFWAPWCGPCRMIASTIDEIahdykdklkVVKVNTdq......
thio_rhosh   1  sdvPVVVDFWAEWCGPCRQIGPALEELskeyagkvkIVKVNVde......
thio_aliac   1  gdkPVLVDFWAAWCGPCRMMAPVLEEFaeahadkvtVAKLNVde......
thio_strau   1  sdkPVLVHFEGPWCGPCKMVAPVLDEIaneyegkvkVAKVNTde......
thio_haein   1  sdiPILLDFWAPWCGPCKMIAPVLDELapefagkvkIVKMNVdd......
thi2_corne   1  aetPVLVDFWAGWCAPCKAIAPVLEELsneyagkvkIVKVDVts......
thio_bacsu   1  segVVLADFWAPWCGPCKMIAPVLEELdqemgdklkIVKIDVde......
thim_pea     1  setPVLVDFWAPWCGPCRMIAPIIDELakeyagkikCYKLNTde......
thih_syny3   1  spkPVLVDFYATWCGPCQMMAPILEQVgshlrqqiqVVKIDTdk......
thio_chlps   1  atgLVLIDFFAEWCGPCKMLTPVLESLeaevssvl.IGKVNIdd......
thih_arath   1  sktLVVVDFTASWCGPCRFIAPFFADLakklpnvl.FLKVDTde......
er60_mouse   1  sagLMLVEFFAPWCGHCKRLAPEYEAAa.trlkivpLAKVDCta......
txla_synp7   1  ndrPMLLEFYADWCTSCQAMAGRIAALkqdysdrldFVMLNIdn.....d
1kte         1  iqpGKVVVFIKPTCPFCRKTQELLSQLp..fkegl.LEFVDItatsdtne
1grx         1  ...MQTVIFGRSGCPYSVRAKDLAEKLsner.ddfqYQYVDIraeg...i
2trcP        1  kvtTIVVNIYEDGVRGCDALNSSLECLaaey.pmvkFCKIRAsnt.....

1thx        45  .npttvkkykveg..VPALRLVK.geqildstegvis.......kdKLLS
thio_thife  45  .npntppqyairg..IPTLLLFK.agkleatkvgals.......kaQLTA
thio_strcl  44  .npataakygvms..IPTLNVYQ.ggevvktivgakp.......kaALLR
thio_rhoru  45  .npqtpskygvrg..IPTLMIFK.dgqvaatkigalp.......ktKLFE
thio_myctu  45  .npetarnfqvvs..IPTLILFK.dgqpvkrivgakg.......kaALLR
thio_gripa  45  .nptiateygirs..IPTVMIFI.ngkkvdtvvgavp.......klTLLN
thio_rhosh  45  .npespamlgvrg..IPALFLFK.ngqvvsnkvgaap.......kaALAT
thio_aliac  45  .npettsqfgims..IPTLILFK.ggrpvkqligyqp.......keQLEA
thio_strau  45  .npqlasqygvrs..IPTRLMFK.ggevaanmvgaap.......ktRLAA
thio_haein  45  .nqatpaqfgvrs..IPTLLLIK.ngqvvatqvgalp.......ktQLAN
thi2_corne  45  .cedtavkynirn..IPALLMFK.dgevvaqqvgaap.......rsKLAA
thio_bacsu  45  .nqetagkygvms..IPTLLVLK.dgevvetsvgfkp.......keALQE
thim_pea    45  .spntatkygirs..IPTVLFFK.ngerkdsvigavp.......kaTLSE
thih_syny3  45  .ypaiatqyqiqs..LPTLVLFK.qgqpvhrmegvqq.......aaQLIQ
thio_chlps  44  .hpapaeqygvss..IPTLILFK.dgkevdrvvglkd.......kdSLIR
thih_arath  44  .lksvasdwaiqa..MPTFMFLK.egkildkvvgak........kdELQS
er60_mouse  44  .ntntcnkygvsg..YPTLKIFR.ageeagaydgprt.......adGIVS
txla_synp7  46  kwlpevldynvdg..IPQFVYLNgqgqpqgisigelp.......rsVLAA
1kte        48  iqdylqqltgart..VPRVFIGK...ecig...gctd.lesmhkrgELLT
1grx        44  tkedlqqkagkpvetVPQIFVDQ...qhig...gytd......faaWVKE
2trcP       45  ...gagdrfssdv..LPTLLVYK.ggelisnfisvaeqfaedffaaDVES

1thx        84  FLDThln....
thio_thife  84  FLDSql.....
thio_strcl  83  XLDPflgk...
thio_rhoru  84  WVEAsv.....
thio_myctu  84  ELSDvv.....
thio_gripa  84  TLQKhl.....
thio_rhosh  84  WIASal.....
thio_aliac  84  QLADvl.....
thio_strau  84  FLDAsl.....
thio_haein  84  FINQhi.....
thi2_corne  84  FIDQni.....
thio_bacsu  84  LVNKhl.....
thim_pea    84  KVEKyi.....
thih_syny3  84  QLQVfv.....
thio_chlps  83  LINQh......
thih_arath  82  TIAKhl.....
er60_mouse  83  HLKKq......
txla_synp7  87  NLDAlv.....
1kte        89  RLQQvg.....
1grx        82  NLDA.......
2trcP       89  FLNEygllper

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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