1pamA - reference 3
Name cyclodextrin
Number of sequences 19
Alignment Length 605
Longest Sequence 511
Shortest Sequence 404
Average Percent Identity 34
Maximum Percent Identity 78
Minimum Percent Identity 16
Sequence Name SWISSPROT Accession
1pamA P05618
amy_bacci P08137
cdgt_bacli P14014
amy_thetu P26827
CDG2_PAEMA P31835
CDG1_PAEMA P04830
cdgt_bacst P31797
cdgt_bacs2 P31746
amym_bacst P19531
cdgt_klepn P08704
2aaa P56271
amyb_paepo P21543
amya_aspor P10529
amy1_deboc P19269
amy1_sacfi P21567
ydd2_schpo Q10427
amy1_schpo Q09840
1smd P04745
1jdc P13507
Family 1pamA amy_bacci cdgt_bacli amy_thetu CDG2_PAEMA CDG1_PAEMA cdgt_bacst cdgt_bacs2 amym_bacst cdgt_klepn
Family 2aaa amyb_paepo amya_aspor amy1_deboc amy1_sacfi ydd2_schpo amy1_schpo
Family 1smd
Family 1jdc
1pamA 1 .tDVIYQIFTdrfs..DGNPANnptgaa...fdgsct.nlrlYCGGDWQG
amy_bacci 1 .tDVIYQIVTdrfv..DGNTANnpagsa...ydatcstnlklYCGGDWQG
cdgt_bacli 1 .tDVIYQVFTdrfl..DGNPSNnptgaa...fdgtcs.nlklYCGGDWQG
amy_thetu 1 .tDVIYQIVTdrfv..DGNTSNnptgdl...ydptht.slkkYFGGDWQG
CDG2_PAEMA 1 .tDTVYQIVTdrfv..DGNSANnptgaa...fssdhs.nlklYFGGDWQG
CDG1_PAEMA 1 .tDVIYQIVTdrfa..DGDRTNnpagda...fsgdrs.nlklYFGGDWQG
cdgt_bacst 1 .sDVVYQIVVdrfv..DGNTSNnpsgal...fssgct.nlrkYCGGDWQG
cdgt_bacs2 1 .kDVIYQIVTdrfs..DGNPGNnpsgai...fsqnci.dlhkYCGGDWQG
amym_bacst 1 .gDVIYQIIIdrfy..DGDTTNnnpaksyglydptks.kwkmYWGGDLEG
cdgt_klepn 1 .kETIYFLFLdrfs..DGDPSNnagfns.atydpn...nlkkYTGGDLRG
2aaa 1 .tQSIYFLLTdrfgrtdns............ttatcntgneiYCGGSWQG
amyb_paepo 1 .kQSIYFIMTdrfsngdpsndnyg.......gfnsnnsdqrkWHGGDFQG
amya_aspor 1 .sQSIYFLLTdrfartdgs............ttatcntadqkYCGGTWQG
amy1_deboc 1 .dQSIYQIVTdrfarsdgs............ttadclvsdrkYCGGSYKG
amy1_sacfi 1 .sQSIYQIVTdrfartdgd............tsascntedrlYCGGSFQG
ydd2_schpo 1 .kQVIYQVLTdrfaldedn............fyakas..gnlYLGGTWKG
amy1_schpo 1 .rRSIYQIITdrfsleegat...........eripcdpvrfmYCGGTWNG
1smd 1 grTSIVHLFE...................................wrwvd
1jdc 1 gdEIILQGFHwnvvreap...........................ndwyn
1pamA 44 IINKIndgYLTGMGITAIWIs.qpveniysvinysgv.nntAYHGYWARD
amy_bacci 45 IMNKIndgYFTGMGITALWIs.qpveniysvinysgv.nntAYHGYWARD
cdgt_bacli 44 LVNKIndnYFSDLGVTALWIs.qpvenifatinysgv.tntAYHGYWARD
amy_thetu 44 IINKIndgYLTGMGVTAIWIs.qpveniyavlpdstfggstSYHGYWARD
CDG2_PAEMA 44 ITNKIndgYLTGMGITALWIs.qpvenitavinysgv.nntAYHGYWPRD
CDG1_PAEMA 44 IIDKIndgYLTGMGVTALWIs.qpvenitsvikysgv.nntSYHGYWARD
cdgt_bacst 44 IINKIndgYLTDMGVTAIWIs.qpvenvfsvmndasg..saSYHGYWARD
cdgt_bacs2 44 IIDKIndgYLTDLGITALWIs.qpvenvyalhpsg....ytSYHGYWARD
amym_bacst 47 VRQKL..pYLKQLGVTTIWLs.pvlnnldtlagtd....ntGYHGYWTRD
cdgt_klepn 44 LINKL..pYLKSLGVTSIWIt.ppidnvnntdaag....ntGYHGYWGRD
2aaa 38 IIDHLd..YIEGMGFTAIWIs.piteqlpqdtad.....geAYHGYWQQK
amyb_paepo 43 IINKLd..YIKNMGFTAIWIt.pvtmqkse..........yAYHGYHTYD
amya_aspor 38 IIDKLd..YIQGMGFTAIWIt.pvtaqlpqttay.....gdAYHGYWQQD
amy1_deboc 38 IIDKLd..YIQGMGFTAIWIs.pvveqipdntay.....gyAYHGYWMKN
amy1_sacfi 38 IIKKLd..YIKDMGFTAIWIs.pvvenipdntay.....gyAYHGYWMKN
ydd2_schpo 36 ITRNLd..YIKSLGCTAIWIs.pivknisettdc.....gqAYHGYWAQD
amy1_schpo 39 IRNHLd..YIQGMGFDAIWIs.pifenvegndid.....gsSYHGYWTTN
1smd 16 ialecer.YLAPKGFGGVQVs.ppnenvaihnp......frPWWERYQPV
1jdc 24 ilrqqaa.TIAADGFSAIWMpvpwrd..fsswsdgs..ksgggegyfwhd
1pamA 92 FKKTNPAYGTMQDFKNLIDTAhah..nIKVIIDFAPNHtspassddpsfa
amy_bacci 93 FKKTNPAFGSMTDFANLISAAhsr..nIKVVIDFAPNHtspametnasfg
cdgt_bacli 92 FKKTNPYFGTMTDFQNLVTTAhak..gIKIIIDFAPNHtspametdtsfa
amy_thetu 93 FKRTNPYFGSFTDFQNLINTAhah..nIKVIIDFAPNHtspasetdptya
CDG2_PAEMA 92 FKKTNAAFGSFTDFSNLIAAAhsh..nIKVVMDFAPNHtnpasstdpsfa
CDG1_PAEMA 92 FKQTNDAFGDFADFQNLIDTAhah..nIKVVIDFAPNHtspadrdnpgfa
cdgt_bacst 91 FKKPNPFFGTLSDFQRLVDAAhak..gIKVIIDFAPNHtspasetnpsym
cdgt_bacs2 89 YKKTNPYYGNFDDFDRLMSTAhsn..gIKVIMDFTPNHsspaletnpnyv
amym_bacst 90 FKQIEEHFGNWTTFDTLVNDAhqn..gIKVIVDFVPNHstpfkandstfa
cdgt_klepn 87 YFRIDEHFGNLDDFKELTSLMhspdynMKLVLDYAPNHsnanden.....
2aaa 80 IYDVNSNFGTADNLKSLSDALhar..gMYLMVDVVPDHmgyagn......
amyb_paepo 80 FYAVDGHLGTMDKLQELVRKAhdk..nIAVMVDVVVNHtgdf........
amya_aspor 80 IYSLNENYGTADDLKALSSALher..gMYLMVDVVANHmgydga......
amy1_deboc 80 IDELNTNFGTADELKQLASELhsr..sMLLMVDVVYNHyawngd......
amy1_sacfi 80 IYKINENFGTADDLKSLAQELhdr..dMLLMVDIVTNHygsdgs......
ydd2_schpo 78 MTQLNENFGTEEDLKELVNAIhek..nMLCMVDIVVNHmghags......
amy1_schpo 81 LYELNHHFGTKEEFMELIQELhkr..dIWILLDVAINSmaingp......
1smd 58 SYKLCTRSGNEDEFRNMVTRCnnv..gVRIYVDAVINHmcgnavsagtss
1jdc 69 fnk.ngrygsdaqlrqaasalgga..gVKVLYDVVPNHmnr.........
1pamA 140 engrlydngnll.ggytnd...tqNLFHHY.ggtd......fst....ie
amy_bacci 141 engklydngtll.ggytgd...tnGYFHHN.ggtd......fst....lk
cdgt_bacli 140 engklydngnlv.ggytnd...tnGYFHHN.ggsd......fst....le
amy_thetu 141 engrlydngtll.ggytnd...tnGYFHHY.ggtd......fss....ye
CDG2_PAEMA 140 engalynngtll.gkysnd...taGLFHHN.ggtd......fst....te
CDG1_PAEMA 140 enggmydngsll.gaysnd...taGLFHHN.ggtd......fst....ie
cdgt_bacst 139 engrlydngtll.ggytnd...anMYFHHN.ggtt......fss....le
cdgt_bacs2 137 engaiydngall.gnysnd...qqNLFHHN.ggtd......fss....ye
amym_bacst 138 eggalynngtym.gnyfdd..atkGYFHHN.gdis.....nwdd....ry
cdgt_klepn 132 efgalyrdgvfi.tdyptnvaantGWYHHN.ggvt.....nwnd......
2aaa 122 ..gndvdysvfd....pfd...ssSYFHPY.clit.....dwdn.....l
amyb_paepo 120 ..qpgngfaka.....pfd...kaDWYHHN.gdit...dgdyns......
amya_aspor 122 ..gssvdysvfk....pfs...sqDYFHPF.cfiq.....nyed..qtqv
amy1_deboc 122 ..gssvdyssft....pfn...qqSYFHDY.clit.....nynd..qtnv
amy1_sacfi 122 ..gdsidyseyt....pfn...dqKYFHNY.clis.....nydd..qaqv
ydd2_schpo 120 ...kpvnfllyq....pfn...sgKYYHNW.qfvq.....nydd..phet
amy1_schpo 123 ..leqmsfekvi....pfn...daSFFHPH.cwv......dyesndiesv
1smd 106 tcgsyfnpgsrdfpavpy....sgWDFNDGkcktgsgdienynd.....a
1jdc 107 .......gypdkeinlpa....gqGFWRND.cadpg....nypn.....d
1pamA 175 ngiykn.....lYDLADLNHNNSSVDVYLKDaikmwl.dlGVDGIRVDAV
amy_bacci 176 ngiykn.....lYDLADLNHNNSTIDTYFKNairlwl.dmGIDGIRVDAV
cdgt_bacli 175 ngiykn.....lYDLADLNHNNSTIDTYFKDaiklwl.dmGVDGIRVDAV
amy_thetu 176 dgiyrn.....lFDLADLNQQNSTIDSYLKSaikvwl.dmGIDGIRLDAV
CDG2_PAEMA 175 sgiykn.....lYDLADINQNNNTIDSYLKEsiqlwl.nlGVDGIRFDAV
CDG1_PAEMA 175 dgiykn.....lYDLADINHNNNAMDAYFKSaidlwl.gmGVDGIRFDAV
cdgt_bacst 174 dgiyrn.....lFDLADLNHQNPVIDRYLKDavkmwi.dmGIDGIRMDAV
cdgt_bacs2 172 dsiyrn.....lYDLADYDLNNTVMDQYLKEsikfwl.dkGIDGIRVDAV
amym_bacst 175 eaqwknftdpagFSLADLSQENGTIAQYLTDaav....qlVAHGLRIDAV
cdgt_klepn 169 ffqvknhn...lFNLSDLNQSNTDVYQYLLDgskfwi.daGVDAIRIDAI
2aaa 152 tmvedcwegdtiVSLPDLDTTETAVRTIWYDwvadlvsnySVDGLRIDSV
amyb_paepo 150 nnqwkiengd.vAGLDDLNHENPATANELKNwikwllnetGIDGLRLDTV
amya_aspor 155 edcwlgdn...tVSLPDLDTTKDVVKNEWYDwvgslvsnySIDGLRIDTV
amy1_deboc 155 edcwegdt...eVSLPDLSTEDNEVIGVFQTwvsdfvqnySIDGLRIDSA
amy1_sacfi 155 qscwegds...sVALPDLRTEDSDVASVFNSwvkdfvgnySIDGLRIDSA
ydd2_schpo 152 itgwlgds...hVNLPDIRTEKNEVRKFFQNwvsdlikryQFDGIRLDTA
amy1_schpo 157 qncwlgde...nLLLADVDTENEVVLSVLEKwiknvvqeyDIDGIRFDAI
1smd 147 tqvrdcr....lSGLLDLALGKDYVRSKIAEymnhli.diGVAGFRIDAS
1jdc 136 cddgdrf....iGGDADLNTGHPQVYGMFRDeftnlrsqyGAGGFRFDFV
1pamA 219 KHMPfgwqksfmatinnyk........pvFTFGEWFlgvnei........
amy_bacci 220 KHMPfgwqknwmssiysyk........pvFTFGEWFlgtnet........
cdgt_bacli 219 KHMPqgwqknwmssiyahk........pvFTFGEWFlgsaap........
amy_thetu 220 KHMPfgwqknfmdsilsyr........pvFTFGEWFlgtnei........
CDG2_PAEMA 219 KHMPqgwqksyvssiyssan.......pvFTFGEWFlgpdem........
CDG1_PAEMA 219 KHMPfgwqksfvssiyggdh.......pvFTFGEWYlgadqt........
cdgt_bacst 218 KHMPfgwqkslmdeidnyr........pvFTFGEWFlsenev........
cdgt_bacs2 216 KHMSegwqtslmseiyshk........pvFTFGEWFlgsgev........
amym_bacst 221 KHFNsgfsksladklyqkk........diFLVGEWYgddpgtan......
cdgt_klepn 215 KHMDksfiqkwtsdiydysksigre..gfFFFGEWFgasantttgv....
2aaa 202 LEVQpdffpgynkas............gvYCVGEIDng............
amyb_paepo 199 KHVPkgflkdfdqaa............ntFTMGEIFhg............
amya_aspor 202 KHVQkdfwpgynkaa............gvYCIGEVLdg............
amy1_deboc 202 KHVDtasltkfedas............gvYNLGEVYqg............
amy1_sacfi 202 KHVDqgffpdfvsas............gvYSVGEVFqg............
ydd2_schpo 199 KHVEksffptfieaa............nvFTTGEVFhg............
amy1_schpo 204 KHAPiefwlrmskaa............diFTIGEYFtg............
1smd 192 KHMWpgdikaildklhnlnsnwfpegskpFIYQEVIdlgg..........
1jdc 182 RGYApervnswmtdsa..........dnsFCVGQLWkgpseypnwdwrnt
1pamA 253 ..speyhq.fanesgmslldfrfaqkarqvfrdnt.dnmyglk.amlegs
amy_bacci 254 ..dannty.fanesgmslldfrfsqkvrqvfrdgs.dtmygld.smlsst
cdgt_bacli 253 ..dadntd.fanesgmslldfrfnsavrnvfrdnt.snmyald.smltat
amy_thetu 254 ..dvnnty.fanesgmslldfrfsqkvrqvfrdnt.dtmygld.smiqst
CDG2_PAEMA 254 ..tqdnin.fanqsgmhlldfafaqeirevfrdks.etmtdln.svisst
CDG1_PAEMA 254 ..dgdnik.fanesgmnlldfeyaqevrevfrdkt.etmkdly.evlast
cdgt_bacst 252 ..dannhy.fanesgmslldfrfgqklrqvlrnns.dnwygfn.qmiqdt
cdgt_bacs2 250 ..dpqnhh.fanesgmslldfqfgqtirnvlkdrt.snwydfn.emitst
amym_bacst 257 ..hlekvr.yannsgvnvldfdlntvirnvfgtft.qtmydln.nmvnqt
cdgt_klepn 259 ..dg.naidyantsgsalldfgfrdtlervlvgrsgntmktln.sylikr
2aaa 228 ..npasdcpyqk.vldgvlnypiywqllyafesss.gsisnly.nmiksv
amyb_paepo 225 ..dpayvgdytr.yldaaldfpmyytikdvfghd..qsmrkik.drysdd
amya_aspor 228 ..dpaytcpyqn.vmdgvlnypiyypllnafksts.gsmddly.nmintv
amy1_deboc 228 ..dptytcpyqn.ymkgvtnyplyypvyrffsdts.atsselt.smistl
amy1_sacfi 228 ..dpaytcpyqn.yipgvsnyplyypttrffkttd.sssselt.qmissv
ydd2_schpo 225 ..dpkvvgdyqk.ylpstlnfplffqlretfldpk.hsmfsfydkavldv
amy1_schpo 230 ..spaeacdyqnsgldsflnfplywpitwafnntg.lqceala.iainqi
1smd 232 ..epikssdyf..gngrvtefkygaklgtvirkwngekmsylk.nwgegw
1jdc 222 aswqqiikdwsdrakcpvfdfalkermqn.......gsiadwk.hglngn
1pamA 298 evdyaqvndqvTFIDNHDMERfht.....................sngdr
amy_bacci 299 aadyysvndqvTFLDNHDMDRfqv.....................sgang
cdgt_bacli 298 aadynqvndqvTFIDNHDMDRfkt.....................savnn
amy_thetu 299 asdynfindmvTFIDNHDMDRfy......................nggst
CDG2_PAEMA 299 gssynyinnmvTFIDNHDMDRfqq.....................agast
CDG1_PAEMA 299 esqydyinnmvTFIDNHDMDRfqv.....................agsgt
cdgt_bacst 297 asaydevldqvTFIDNHDMDRfmi.....................dggdp
cdgt_bacs2 295 ekeynevidqvTFIDNHDMSRfsv.....................gsssn
amym_bacst 302 gneykykenliTFIDNHDMSRfls.....................vnskn
cdgt_klepn 305 qtvftsddwqvVFMDNHDMARigtalrsnattfgpgnnetggsqseafaq
2aaa 273 asdcsdptllgNFIENHDNPRfak.....................ytsdy
amyb_paepo 269 r.yyrdaqtngVFIDNHDVKRflndasgkpga.............nydkw
amya_aspor 273 ksdcpdstllgTFVENHDNPRfas.....................ytndi
amy1_deboc 273 qsscsdvsllgNFIENHDQVRfps.....................vtsdt
amy1_sacfi 273 asscsdptlltNFVENHDNERfas.....................mtsdq
ydd2_schpo 271 rhyfkdvtvlcNFLENHDFPRffh.....................etkdi
amy1_schpo 276 neecndinvlgTFIGNHDLPRish.....................nntdq
1smd 277 g..fmpsdralVFVDNHDNQRghgaggasil..............tfwda
1jdc 264 pd.prwrevavTFVDNHDTGYspgqnggqhh..............walqd
1pamA 327 rkLEQALAFTLTSR.gvPAIYYgseqymsgg.........NDPDNRar..
amy_bacci 328 rkLEQALALTLTSR.gvPAIYYgteqymtg.........nGDPNNRakm.
cdgt_bacli 327 rrLEQALAFTLTSR.gvPAIYYgteqyltg.........nGDPDNRgkm.
amy_thetu 327 rpVEQALAFTLTSR.gvPAIYYgteqymtg.........nGDPYNRamm.
CDG2_PAEMA 328 rpTEQALAVTLTSR.gvPAIYYgteqymtg.........nGDPNNRgmm.
CDG1_PAEMA 328 raTEQALALTLTSR.gvPAIYYgteqymtg.........dGDPNNRamm.
cdgt_bacst 326 rkVDMALAVLLTSR.gvPNIYYgteqymtg.........nGDPNNRkmm.
cdgt_bacs2 324 rqTDMALAVLLTSR.gvPTIYYgteqyvtg.........gNDPENRkpl.
amym_bacst 331 kaNLHQRLLSFSLRgvrPPIYYgteqymag.........gNDPYNRgmm.
cdgt_klepn 355 krIDLGLVATMTVR.giPAIYYgtehyaanftsnsfgqvgSDPYNRekm.
2aaa 302 sqAKNVLSYIFLSD.giPIVYAgeeqhyagg.........KVPYNRea..
amyb_paepo 305 pqLKAALGFTLTSR.giPIIYQgteqgysg.........gDDPANRen..
amya_aspor 302 alAKNVAAFIILND.giPIIYAgqeqhyagg.........NDPANReat.
amy1_deboc 302 slIKNDMAFIILGD.giPIIYYgqeqglngg.........SDPANReal.
amy1_sacfi 302 slISNAIAFVLLGD.giPVIYYgqeqglsgk.........SDPNNReal.
ydd2_schpo 300 alALNALTALIFMD.giPIIYYgqeqmfdgg.........SDPDNRegl.
amy1_schpo 305 arIMNAITFVMMWD.giPIIYYgteqnfnsy.........HDPFNReal.
1smd 311 rlYKMAVGFMLAHPygfTRVMSsyrwpryfengkdvndwvgpp.ndngvt
1jdc 299 glIRQAYAYILTSP.gtpvvywdhmydwg.....................
1pamA 365 ...........lpsfsttttayQVIQKLAPLRKsn....paiaygsther
amy_bacci 367 ............ssfststtayNVISKLAPLRKsn....paiaygttqqr
cdgt_bacli 366 ............psfsksttafNVISKLAPLRKsn....paiaygstqqr
amy_thetu 366 ............tsfntsttayNVIKKLAPLRKsn....paiaygttqqr
CDG2_PAEMA 367 ............tgfdtnktayKVIKALAPLRKsn....palaygsttqr
CDG1_PAEMA 367 ............tsfntgttayKVIQALAPLRKsn....paiaygttter
cdgt_bacst 365 ............ssfnkntrayQVIQKLSSLRRnn....palaygdteqr
cdgt_bacs2 363 ............ktfdrstnsyQIISKLASLRQtn....salgygttter
amym_bacst 371 ............pafdttttafKEVSTLAGLRRnn....aaiqygtttqr
cdgt_klepn 403 ............pgfdteseafSIIKTLGDLRKss....paiqngtytel
2aaa 340 .........twlsgydtsaelyTWIATTNAIRKlaiaadsayityandaf
amyb_paepo 343 ............mnfnanhdlyQYIAKLNYVRNnh....palqngsqrek
amya_aspor 341 ..........wlsgyptdselyKLIASANAIRNyaiskdtgfvtyknwpi
amy1_deboc 341 ..........wlsgyntdseyyELISKLNQIRNqaikkdsaystykssvv
amy1_sacfi 341 ..........wlsgynkesdyyKLIAKANAARNaavyqdssyatsqlsvi
ydd2_schpo 339 ..........wkskyntsnpmfRHLSSMIRTRQnlvetypeftyvlsfql
amy1_schpo 344 ..........wlsnfdmenvyyKLIGILNRFRKsvqrqeenyvntrstil
1smd 360 kevtinpdttcgndwvceh.rwRQIRNMVNFRNvv........dgqpftn
1jdc 327 ....................ygDFIRQLIQVRRaa......gvradsais
1pamA 400 win..ndVIIYERkfgnnVAVVAINrn..mntpasitglvtslprgs...
amy_bacci 401 win..ndVYIYERkfgnnVAVVAINknl..tssysiaglntslpsgt...
cdgt_bacli 400 win..ndVYIYERkfgksVAVVAVNrnl..ttptsitnlntslpsgt...
amy_thetu 400 win..ndVYIYERkfgnnVALVAINrnl..stsynitglytalpagt...
CDG2_PAEMA 401 wvn..sdVYVYERkfgsnVALVAVNrss..ttaypisgaltalpngt...
CDG1_PAEMA 401 wvn..ndVLIIERkfgssAALVAINrns..saaypisgllsslpagt...
cdgt_bacst 399 win..gdVYVYERqfgkdVVLVAVNrss..ssnysitglftalpagt...
cdgt_bacs2 397 wln..edIYIYERtfgnsIVLTAVNss...nsnqtitnlntslpqgn...
amym_bacst 405 win..ndVYIYERkffndVVLVAINrnt..qssysisglqtalpngs...
cdgt_klepn 437 wvn..ddILVFERrsgndIVIVALNrg....eantinvkniavpngv...
2aaa 381 ytd..snTIAMAKgtsgsQVITVLSnkgssgssytltlsgsgytsgtk..
amyb_paepo 377 wvd..dsFYSFQRskngdEAIVFINnsw.nsqtrti.gnfdnlsngtr..
amya_aspor 381 ykd..dtTIAMRKgtdgsQIVTILSnkgasgdsytlslsgagytagqq..
amy1_deboc 381 sss..dhYIATRKgsdanQLISIFNnlgsngsq.ditvsntgyssgdk..
amy1_sacfi 381 fsn..dhVIATKRgs....VVSVFNnlgssgss.dvtisntgyssged..
ydd2_schpo 379 yid..dsVYVFTRpg....VIIAISnegs.tssfkveidlkehwkevpss
amy1_schpo 384 svk..ihHIVVQKln....VITVLNnygi.hneerlsivfkplgaspkdt
1smd 401 wydngsnQVAFGRg...nRGFIVFNnd...dwtfsltl.qtglpagt...
1jdc 351 fhsgysgLVATVSg...sQQTLVVAln......sdlgn.pgqvasgs...
1pamA 443 yndvlggiln.....gntltvgaggaasnftlap..ggtavwqyttdatt
amy_bacci 444 ytdvlanslsg.....nsitvgssgavntftlqa..ggea..........
cdgt_bacli 443 ytdvlggvlng.....nnits.sggnissftlaa..gatavwqytasett
amy_thetu 443 ytdvlggllng.....nsisvasdgsvtpftlsa..gevavwqyvsssns
CDG2_PAEMA 444 ytdvlggllng.....nsitv.nggtvsnftlaa..ggtavwqytttess
CDG1_PAEMA 444 ysdvlngllng.....nsitvgsggavtnftlaa..ggtavwqytapets
cdgt_bacst 442 ytdqlgglldg.....ntiqvgsngsvnafdlgp..gevgvwaysatest
cdgt_bacs2 439 ytdelqqrldg.....ntitvnangavnsfqlra..nsvavwqvsnpsts
amym_bacst 448 yadylsgllgg.....ngisvsngsva.sftlap..gavsvwqystsasa
cdgt_klepn 478 ypslign.........nsvsvankrtt..ltlmq..neavvirsqsd...
2aaa 427 lieaytc.........tsvtvdssgdi.pvpmas..glprvllpasvvds
amyb_paepo 421 ltnqlsn.........dsvqinngsit..vtlap..kevkvf........
amya_aspor 427 ltevigc.........ttvtvgsdgn...vpvpma.gglprvlyptekla
amy1_deboc 426 vidiisc.........nsvlagdsgs...lsvsis.ggmpqvyapssvls
amy1_sacfi 422 lvevltc.........stvs..gssd...lqvsiq.ggqpqifvpaky..
ydd2_schpo 422 ftdiltq.........ktipckdhk....lkiksk.sglpkiliss...d
amy1_schpo 427 ffdiinn.........qkyvvntdgt...lkvvit.ngfpivlyptskie
1smd 441 ycdvisgdkingnctgikiyvsddgka.hfsisnsaedpfiaihaeskl.
1jdc 388 fseavnasng.............................qvrvwrs....
1pamA 486 piign
amy_bacci 477 .....
cdgt_bacli 485 ptigh
amy_thetu 486 pligh
CDG2_PAEMA 486 piign
CDG1_PAEMA 487 paign
cdgt_bacst 485 piigh
cdgt_bacs2 482 pligq
amym_bacst 490 pqigs
cdgt_klepn 512 .....
2aaa 465 sslcg
amyb_paepo 450 .....
amya_aspor 464 gskic
amy1_deboc 463 gsgic
amy1_sacfi 455 asdic
ydd2_schpo 455 psfl.
amy1_schpo 464 ts...
1smd 489 .....
1jdc 405 .....
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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