2pia
MSF format
Number of sequences 28
Alignment Length 368
Longest Sequence 294
Shortest Sequence 207
Repartition H19/H6/H1/H1/H1
Average Percent Identity 29
Maximum Percent Identity 78
Minimum Percent Identity 13
2pia_2 1 .....pqedgflrlkiaskekiar.....diwsfeltdpqgaplppfeag
vanb_pses9 1 ..........mldlmirglrleap.....gilglelvatdgsplptfeag
1fdr_2 1 ........adwvtgkvtkvqnwt......dalfsltv...hapvlpftag
1fnc_2 1 tvnkfk.pktpyvgrcllntkitgddapgetwhmvfs...hegeipyreg
fenr_cyapa 1 plnlfr.panpyigkciynerivgegapgetkhiift...hegkvpyleg
fenr_spisp 1 pvniyk.pknpyigkclsneelvreggtgtvrhlifdi..sggdlryleg
fens_orysa 1 .lntyk.pkepytativsverivgpkapgetchivid...hggnvpyweg
fenr_anaso 1 pvnlyr.pnapfigkvisneplvkeggigivqhikfdl..tggnlkyieg
fenr_chlre 1 plntys.nkapfkakvrsvekitgpkatgetchiiie...tegkipfweg
1ndh_2 1 paitlenpdikyplrlidkevvnh.....dtrrfrfalpspehilglpvg
nia2_brana 1 ..ialvnprekvpvtliektsish.....dvrrfrfalpsedqqlglpvg
nia1_maize 1 .apalsnprekihcrlvgkkelsr.....dvrlfrfslpspdqvlglpig
nia_volca_1 1 .plvvlnprqkvklplierielnr.....ntrifrfglpspqhriglpvg
nia_cicin_1 1 pkeiaptrrekipcklisktsvsh.....dvrlfrfalpspdqvlglpvg
nia7_horvu_1 1 .avalanprekvrcrlvdkksmsh.....nvrlfrfalpspdqklglpvg
nia3_maize 1 pvialsnprekvpcqlvartvlsr.....dvrlfrfalpssgqvlglpvg
nia1_soybn 1 .......prekipcklisktsish.....dvrlfrfglpsdgllmglavg
nia_betve 1 .......pgakiptklvykkslsh.....dvrlfrlalpsddqvlglpvg
nia_phyin_1 1 ..........kvpivlisrevvsh.....darifkfalpakdlrlglpig
nc5r_yeast_1 1 .............fplvektilth.....ntsmykfglphaddvlglpig
nia_emeni_1 1 prptfltpkawtkatltkktsvss.....dthiftlslehpsqalglptg
nia_lepmc_1 1 lrptfldsrtwskallssktkvsw.....dtrifrfkldhasqtlglptg
nia_aspng_1 1 pratflqskswtkatlvkrtdvsw.....dtriftfqlqhdkqtlglpig
mcr1_yeast_1 1 ....fkgddkwidlpiskieeesh.....dtrrftfklptedsemglvla
nia_fusox_1 1 ...............ldkktsisp.....dtkifsfklnheaqkiglptg
nia_neucr_1 1 ...............ltfkesvsp.....dtkifhfalshpaqsiglpvg
nia_ustma_1 1 ....fldpkkwratrlgeqanhsp.....darifrfalgsedqelglpwp
nia_beaba_1 1 ....flqpkywskailetktdvss.....dskifsfrldhaaqsiglptg
2pia_2 41 anltvavpn..........gsrrtyslcndsqe......rnryviavkrd
vanb_pses9 36 ahldlhlpg..........glvrpyslcnapge......thryclavlld
1fdr_2 34 qftklglei..........rvqraysyvnspdn.....pdlefylvtvp.
1fnc_2 47 qsvgvipdged...kngkphklrlysiassalgdfgdaksvslcvkrliy
fenr_cyapa 47 qsigiippgtd...kdgkphklrlysiastrhgdfgddktvslsvkrley
fenr_spisp 48 qsigiippgtd...nngkphklrlysiastrhgdhvddktvslcvrqley
fens_orysa 46 qsygiippgen.pkkpgaphnvrlysiastrygdsfdgrttslcvrravy
fenr_anaso 48 qsigiippgvd...kngkpeklrlysiastrhgddvddktislcvrqley
fenr_chlre 47 qsygvippgtkinskgkevptarlysiassrygddgdgqtaslcvrravy
1ndh_2 46 qhiylsari.......dgnlvirpytpvssddd....kgfvdlvikvyfk
nia2_brana 44 khiflcani.......ndklclraytptstvda....vghidlvvkvyfk
nia1_maize 45 khifvcasi.......egklcmraytptsmvde....ighfdllvkvyfk
nia_volca_1 45 khvftyati.......ngenvmraytpisgdee....lgrldmlikvyfa
nia_cicin_1 46 khvfvcati.......ddklcmraytptstide....vgyfellvkiyfk
nia7_horvu_1 45 khvyvcast.......ggklcmraytptssvee....vghvellikiyfk
nia3_maize 46 khifvcasi.......dgklcmraytptssvde....vghfdllvkvyfr
nia1_soybn 39 khiflcvtv.......deklcmraytptssvhe....vgyfdlvvkvyfk
nia_betve 39 khvflcati.......ddklcmraytptstide....vgyldlvvkiyfk
nia_phyin_1 36 nhvflyaki.......ngktavraytpissended..rgfvsflikvyfa
nc5r_yeast_1 33 qhivikani.......ngkditrsytptsldgdt...kgnfellvksyp.
nia_emeni_1 46 qhlmlktpdp...kssssgsiirsytpispsdq....lgmvdilikiyae
nia_lepmc_1 46 qhlmirlrdp.....vtreaiirsytpisqise....qgfcdvlikiyad
nia_aspng_1 46 qhlmikvadp.....tskeaiirsytpisdtnq....egtmdllvkiyfd
mcr1_yeast_1 42 salfakfvtp......kgsnvvrpytpvsdlsq....kghfqlvvkhy..
nia_fusox_1 31 qhlmmrlrdp.....atreaiirsytpysdgsd....cgrldilikiyyd
nia_neucr_1 31 qhlmmrlpdp....akptesiiraytpisdgtle...rgtlrvlvkiyya
nia_ustma_1 42 aalrlslekr...rtgeaemvqraytpysgntq....rgfldilikvyfp
nia_beaba_1 42 qhllvrlrdp.....atreaviraytplsetha....kgqldilikiyrd
2pia_2 75 sn........grggsis.fiddtsegd.....avevslprnefpld....
vanb_pses9 70 pa........srggsra.vheqlrvgq.....hlttsaprnlfplv....
1fdr_2 68 ............dgklsprlaalkpgd.....evqvvseaagffvld...
1fnc_2 94 tnd....agetikgvcsnflcdlkpga.....evkltgpvgkemlmp...
fenr_cyapa 94 tda....ngnlvkgvcsnylcdlkpgd.....evmitgpvgttmlmp...
fenr_spisp 95 khpe...tgetvygvcstylcnleaga.....dvaitgpvgkemllp...
fens_orysa 95 ydpetgkedpskngvcsnflcnskpgd.....kvkvtgpsgkimllp...
fenr_anaso 95 khpe...sgetvygvcstylthiepgs.....evkitgpvgkemllp...
fenr_chlre 97 vdpetgkedpakkglcsnflcdatpgt.....eismtgptgkvlllp...
1ndh_2 85 dthp....kfpaggkmsqylesmkigd.....tiefrgpngllvyqgkgk
nia2_brana 83 dvhp....rfpngglmsqhldslpigs.....vlnikgplghieylgkgn
nia1_maize 84 nehp....kfpngglmtqyldslpvgs.....yidvkgplghveytgrgs
nia_volca_1 84 nehp....afpdggkmsqhfeslrigd.....tvefkgplghfvydgrgs
nia_cicin_1 85 gvep....kfpngglmsqhlesmelgs.....sieikgplghieymgrgt
nia7_horvu_1 84 dedp....kfpagglmsqyldalplga.....pvdikgpvghieyagrga
nia3_maize 85 nent....kfpdggrmtqyldslpvga.....hvdvkgplghveyvgrgg
nia1_soybn 78 gvhp....kfpnggimsqhldslpigs.....vldvkgplghieytgrgn
nia_betve 78 nsnp....rfpngglmsqhldslpigs.....vlhvkgplghveytgrgn
nia_phyin_1 77 gdnp....vhpegglfsqyldglhlgq.....qiqikgplghftyygdgn
nc5r_yeast_1 72 ............tgnvskmigelkigd.....siqikgprgnyhyern..
nia_emeni_1 89 tp.......sipggkmttaldtlplgs.....vieckgptgrfeyldrgr
nia_lepmc_1 87 ap.......greggkmtkaldsipcgh.....wvdmkgpigkfeylgkgv
nia_aspng_1 87 tp.......tvkggkmtmaleklalgs.....eidckgptgrfeylgngk
mcr1_yeast_1 80 ...........eggkmtshlfglkpnd.....tvsfkgpimkwkwqpnq.
nia_fusox_1 72 tp.......qrkggvmtqaldalpigh.....wvdfkgptgkfvyhgngl
nia_neucr_1 74 sp.....tedikggqmtqaldalalgk.....avefkgpvgkfvyqgrgv
nia_ustma_1 85 sdaaatsapafeggkmtmllekidvsspsddltielkgplgsftylgqqq
nia_beaba_1 83 vp.......gqpggkmtqaldsiplgh.....fvdikgpvgkfeylgkgh
2pia_2 107 .............kraksfilvaggigitpmlsmarqlrae.........
vanb_pses9 102 .............aessrsllfaggigitpilamaqvlaar.........
1fdr_2 98 ...........evphcetlwmlatgtaigpylsilrlgkd..........
1fnc_2 132 ............kdpnatiimlgtgtgiapfrsflwkmffek......hd
fenr_cyapa 132 ............edqsatiimlatgtgiapfrsflrrmfeet......ha
fenr_spisp 134 ............ededatiimmatgtgiapfraflwrifkeq......he
fens_orysa 137 ...........eedpnathimiatgtgvapfrgylrrmfmed......vp
fenr_anaso 134 ............ddpeanvimlatgtgiapmrtylwrmfkdaeraa..np
fenr_chlre 139 ............adanaplicvatgtgiapfrsfwrrcfien......vp
1ndh_2 126 fairpdkksspviktvksvgmiaggtgitpmlqviraimkd.........
nia2_brana 124 fmvtgkp......kfakklamlaggpgitpiyqviqsilsd.........
nia1_maize 125 fvingkq......rhasrlamicggsgitpmyqiiqavlrdq........
nia_volca_1 125 ytlngklh.....khathmsfvaggtgitpcyavikaalrd.........
nia_cicin_1 126 fsvhgkq......kfarklamfaggtgitpdlssdasylkd.........
nia7_horvu_1 125 ftvgger......rfarrlamvaggtgitpvyqviqavlrdq........
nia3_maize 126 fvidgkp......rkagrlamvaggsgitpiyqviqavlrdq........
nia1_soybn 119 flvhgkp......rfatrlamlaggtgitpiyqvvqailkd.........
nia_betve 119 flvhgep......kfakrlamvaggtgitpiyqviqailkd.........
nia_phyin_1 118 fslettn......fhaykfgfvaggtgitpvyqvmrailed.........
nc5r_yeast_1 103 ..............crshlgmiaggtgiapmyqimkaiamd.........
nia_emeni_1 127 vlisgke......rfvksfvmicggtgitpvfqvlravmqd.........
nia_lepmc_1 125 csingne......rrvrsmkmicggsgitpiyqvlrailqd.........
nia_aspng_1 125 ilvsgke......rhvssfkmicggtgitpifqvlravmqd.........
mcr1_yeast_1 113 ...............fksitllgagtginplyqlahhiven.........
nia_fusox_1 110 ctineke......rrvrrfimvcggsgitpirqvlravidn.........
nia_neucr_1 114 csvngre......rkvkrfvmvcggsgvtpiyqvaeavavd.........
nia_ustma_1 135 irwkpas.....acslrklamiaggsgitpiwstlkaiadevldasnpss
nia_beaba_1 121 ctvsgts......rhvrrfvmicagsgvtpifqvlravtsd.........
2pia_2 135 ...glrsfrlyyltrdpegtaffdeltsde.........wrsdvkihhd.
vanb_pses9 130 ...gd.tfelhycvrsrrlaafidwleast.........faahvhlhad.
1fdr_2 127 .ldrfknlvlvhaaryaadlsylplmqelekry...egklriqtvvsre.
1fnc_2 164 dykfnglawlflgvptsssllykeefekmkeka...pdnfrldfavsre.
fenr_cyapa 164 dykfnglawlflgvptsstllyreelekmqkan...pnnfrldyaisre.
fenr_spisp 166 dykfkglawlffgipyspnilyqqeleelqeef...penfrltlaisre.
fens_orysa 170 kyrfgglawlflgvantdsllydeeftsylkqy...pdnfrydkalsre.
fenr_anaso 170 eyqfkgfswlvfgvpttpnilykeeleeiqqky...pdnfrltyaisre.
fenr_chlre 171 sykftglfwlfmgvgnsdaklydeelqaiakay...pgqfrldyalsre.
1ndh_2 167 .pddhtvchllfanqtekdillrpeleelrneh...sarfklwytvdra.
nia2_brana 159 .pedetemfvvyanrteddilvreelegwankh...kdrlkvwyvveia.
nia1_maize 161 .pedhtemhlvyanrteddillrdeldrwaaey...pdrlkvwyvidqvk
nia_volca_1 161 .pedktqislvfannteedillreeldelannh...pdrfhlwhtvsqtn
nia_cicin_1 161 .peddtemyvvyanrteddillreeldawadky...sdrvkvwyvvaksi
nia7_horvu_1 161 .pddttemhlvyanrteddmllreeidrwaaan...parlkvwyvvskvg
nia3_maize 162 .pedktemhlvyanrteddillraeldrwaaey...perlkvwyvvsqvk
nia1_soybn 154 .pedctemhvvyanrteddillkeeldew.akk...ydrlkvwyviqesi
nia_betve 154 .pedetemfvvyanrteddillreelddwakkh....eklkvwyvvkesk
nia_phyin_1 153 .akdqtkvaliycvrsqrdlllrkeletlqklr...pgqcrifytlsdme
nc5r_yeast_1 130 .phdttkvslvfgnvheedillkkelealvamk...psqfkivyyldspd
nia_emeni_1 162 .eqdetkcvmldgnrleedillkneldefealagk.kekckivhtltkg.
nia_lepmc_1 160 .sadsthctvlngnrleedilcredldrfaeen...gerctlvhtltqa.
nia_aspng_1 160 .kqdptscvvldgnrqeedilcradldayeald...skkckvvhtltka.
mcr1_yeast_1 139 .pndktkvnllygnktpqdillrkeldalkeky...pdkfnvtyfvddkq
nia_fusox_1 145 .pkdttpclvfngnrsvndilcmeeleeleaan...psrcrvvnalsnp.
nia_neucr_1 149 .dqdgteclvldgnrvegdilmkseldelverakp.mgrcrvkytlsrp.
nia_ustma_1 180 paldpiqiwivygnrteqdilireeldal.srl...kgnlkvwhvlsnc.
nia_beaba_1 156 .aqdgteclvldgnrcekdilcreeldamvara...parttllhklsrp.
2pia_2 172 ..........hgdptkaf..........dfwsvfeksk............
vanb_pses9 166 ............dgptpf..........datallrda.............
1fdr_2 172 .........taagsltgripaliesgelestiglpmnk............
1fnc_2 210 ........qtnekgekmyiqtrmaqyavelwemlkk..............
fenr_cyapa 210 ........qtdskgekmyiqnriaeyanefwnmiqk..............
fenr_spisp 212 ........qqnpeggkmyiqdrikenadqlweliqk..............
fens_orysa 216 ........qknknagkmyvqdkieeysdeifklld...............
fenr_anaso 216 ........qknpqggrmyiqdrvaehadelwqlikn..............
fenr_chlre 217 ........qnnrkggkmyiqdkveeyadeifdlld...............
1ndh_2 212 ........peawdysqgfvne......emirdhlpppe............
nia2_brana 204 ........kegwnystgfite......pvlrehvpegle...........
nia1_maize 207 rp......eegwkysvgfvte......avlrehvpegg............
nia_volca_1 207 ........ssdwkfstgrvtl......emfkqhlfacsg...........
nia_cicin_1 207 ........regwkysegfite......dimrehvpevs............
nia7_horvu_1 207 rp......edaweygvgrvde......qvlrehlplggd...........
nia3_maize 208 r.......ldewkysvgivte......avlrddvpear............
nia1_soybn 199 ........regweysvgfite......siltehipnas............
nia_betve 199 ........regweysvgyire......silrehipegs............
nia_phyin_1 199 lldrndpivrgwaygksrlnf......amvkniigsda............
nc5r_yeast_1 176 ........redwtggvgyitk......dvikehlpaat............
nia_emeni_1 209 ........seswtgrrgride......elirqhagtpd............
nia_lepmc_1 205 ........aegwtgrrgrige......ellkefcg.te............
nia_aspng_1 205 ........pdswtgrrgrise......dllkehai.pd............
mcr1_yeast_1 185 d.......dqdfdgeisfisk......dfiqehvpgpk............
nia_fusox_1 190 ........ppewnglkgfvnq......alvpeymdlpkasge........
nia_neucr_1 196 ........gaeweglrgrldk......tmlerevgegdlr..........
nia_ustma_1 225 ........tpeneanwsmgrg......islpmslgapatnhrqscfggde
nia_beaba_1 201 ........daswcglrgrmdk......eyleehiggfrksd.........
2pia_2 190 .paqhvyccgpqalmdtvr.............dmtg........hwp...
vanb_pses9 181 .gdahlyvcgpggfmehvl.............gcarta......gwd...
1fdr_2 201 .etshvmlcgnpqmvrdtq.............qllketr........qmt
1fnc_2 238 .dntyvymcglkgmekgid.............dimvslaaaegidwieyk
fenr_cyapa 238 .pntfvymcglrgmedgiq.............qcmediakangttwdavv
fenr_spisp 240 .pnthtyicglkgmeggid.............egmsaaagkfdvdwsdyq
fens_orysa 243 .ggahiyfcglkgmmpgiq.............dtlkkvaeqrgesweqkl
fenr_anaso 244 .qkthtyicglrgmeegid.............aalsaaaakegvtwsdyq
fenr_chlre 244 .ngahmyfcglkgmmpgiq.............dmlervakekglnyeewv
1ndh_2 236 .eeplvlmcgpppmiqyac............lpnlerv....ghpkercf
nia2_brana 229 .geslalacgpppmiqfal............qpnlekm....gynvkedl
nia1_maize 233 .ddtlalacgpppmiqfai............spnlekm....kydmansf
nia_volca_1 232 .peclalmcgppamlehcc............vpflesm....gyskeqmi
nia_cicin_1 231 .edtlalacgpppmiqfai............npnlekm....gydknsll
nia7_horvu_1 234 .getlalvcgppamlectv............rpglekm....gydldkcl
nia3_maize 233 .dgtlallcgppsmiqspi............lpnlekm....khqld...
nia1_soybn 223 .pdtlaltcgpppmiqfav............qpnlekl....gydtqnnl
nia_betve 223 .ddvlalacgapsmieeav............rlnlekm....nydtknsl
nia_phyin_1 231 .ed..vcmcgpegmieyac............kpallkl....nydlk...
nc5r_yeast_1 200 .dnvqilicgppamvasv.............rrstvdl....gfrrskpl
nia_emeni_1 233 .retmvlvcgpeamekas.............kkillsl....gwkeenlh
nia_lepmc_1 228 .edglvlvcgpeglersv.............kgllsgm....awrdddvi
nia_aspng_1 228 .gksmvlicgpeameksa.............rkilleq....gwasdlhf
mcr1_yeast_1 210 .esthlfvcgpppfmnaysgekkspkdqgeligilnnl....gyskdqvf
nia_fusox_1 218 .gdelllvcgpppmvkav.............easflgm....gfkddfvf
nia_neucr_1 222 .getmvllcgpegmqnmv.............revlkgm....gwkdedvl
nia_ustma_1 261 ledtlalvcgpppmekav.............sdglnel....gwdlqrcv
nia_beaba_1 228 .gremvlvcgpaaleetv.............rsvlvem....awkedmlf
2pia_2 215 ......sgt.vhfesfga
vanb_pses9 208 ......etr.lhreyfaa
1fdr_2 229 khlrrrpgh.mtaehyw.
1fnc_2 274 rqlkkaeq..wnvevy..
fenr_cyapa 274 kglkkekr..whvet...
fenr_spisp 276 kelkkkhr..whvet...
fens_orysa 279 sqlkknkq..whvev...
fenr_anaso 280 kdlkkagr..whvet...
fenr_chlre 280 eglkhknq..whvev...
1ndh_2 269 af................
nia2_brana 262 li................
nia1_maize 266 ..................
nia_volca_1 265 h.................
nia_cicin_1 264 v.................
nia7_horvu_1 267 v.................
nia3_maize 263 ..................
nia1_soybn 256 ..................
nia_betve 256 ..................
nia_phyin_1 259 ..................
nc5r_yeast_1 232 skmedqvfv.........
nia_emeni_1 265 y.................
nia_lepmc_1 260 f.................
nia_aspng_1 260 ..................
mcr1_yeast_1 255 k.................
nia_fusox_1 250 ..................
nia_neucr_1 254 v.................
nia_ustma_1 294 v.................
nia_beaba_1 260 ..................
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
Back to Index