1tvxA - reference 2


Name                 toxin										

Number of sequences              19
Alignment Length                 78
Longest Sequence                 69
Shortest Sequence                51
Average Percent Identity         34
Maximum Percent Identity         72
Minimum Percent Identity         6

Sequence Name    SWISSPROT Accession
1tvxA                P02775         
1plfA                P02777         
1mgsA                P09341         
GRO_RAT              P14095         
AMC2_PIG             P22952         
GRO2_RABIT           P47854         
PF4L_PIG             P43030         
mi2b_rat             Q10747         
lix_mouse            P50228         
emfi_chick           P08317         
gro1_rabit           P30782         
gcp2_human           P80162         
il8_pig              P26894         
mig_mouse            P18340         
inig_rat             P48973         
1prtF                P04981         
1sap                 P13123         
1lt5D                P32890         
1btn                 Q62261         

Family   1tvxA 1plfA 1mgsA GRO_RAT AMC2_PIG GRO2_RABIT PF4L_PIG mi2b_rat lix_mouse emfi_chick gro1_rabit gcp2_human il8_pig mig_mouse inig_rat
Family   1prtF
Family   1sap
Family   1lt5D
Family   1btn


1tvxA        1  .....gihpknIQSLEVIGKgthcnqvEVIATL....kDGRKICL.....
1plfA        1  .....ginprhISSLEVIGAglhcpspQLIATL....kTGRKICL.....
1mgsA        1  .....gihpknIQSVNVKSPgphcaqtEVIATL....kNGRKACL.....
GRO_RAT      1  .....gihfknIQSLKVMPPgphctqtEVIATL....kNGREACL.....
AMC2_PIG     1  .....gihpkmISDLQVIPAgpqcskaEVIATL....kNGKEVCL.....
GRO2_RABIT   1  .....gihlknIQSVKVTTPgphcdqtEVIASL....kTGQEVCL.....
PF4L_PIG     1  .....gihpsnIQSLEVIRAgahcakvEVIATL....kNDKKICL.....
mi2b_rat     1  ....prvdfenIQSLTVTPPgphctqtEVIATL....kDGQEVCL.....
lix_mouse    1  ....pkinpklIANLEVIPAgpqcptvEVIAKL....kNQKEVCL.....
emfi_chick   1  ...skfihpksIQDVKLTPSgphcknvEIIATL....kDGREVCL.....
gro1_rabit   1  ....qgihlknIQNLKVLSPgphcaqtEVIATL....kSGQEACR.....
gcp2_human   1  ....lrvnpktIGKLQVFPAgpqcskvEVVASL....kNGKQVCL.....
il8_pig      1  ...stpfhpkfIKELRVIESgphcensEIIVKL....vNGKEVCL.....
mig_mouse    1  ...rgtihyksLKDLKQFAPspncnktEIIATL....kNGDQTCL.....
inig_rat     1  ...eqtlrpraIGKLEIIPAslscphvEIIATM...kkNNEKRCL.....
1prtF        1  pthlyknftvqELALKLKGK.....nqEFCLTAfmsgrSLVRACLsdagh
1sap         1  .......dtskIKKVWRVGK.......MVSFTYddngkTGRGAVS.....
1lt5D        1  tqiytindkilSYTESMAGK.....reMVIITF....kSGETFQVevpgs
1btn         1  evpvslk..eaICEVALDYK...kkkhVFKLRL....sDGNEYLF.....

1tvxA       37  .....dpda.pRIKKIVQkklagd....
1plfA       37  .....dqqn.pLYKKIIKrllks.....
1mgsA       37  .....npas.pIVKKIIEkmlnsdksn.
GRO_RAT     37  .....dpea.pMVQKIVQkmlkgvpk..
AMC2_PIG    37  .....dpka.pLIKKIVQkmldsgkkkn
GRO2_RABIT  37  .....npta.pVVKKIIDkmlnkasan.
PF4L_PIG    37  .....dpea.pRIKKIVQkimedggsaa
mi2b_rat    38  .....npqa.pRLQKIIQkll.......
lix_mouse   38  .....dpea.pVIKKIIQkilgsd....
emfi_chick  39  .....dpta.pWVQLIVKalma......
gro1_rabit  38  .....npaa.pMVKKFLQkrls......
gcp2_human  38  .....dpea.pFLKKVIQkil.......
il8_pig     39  .....dpke.kWVQKVVQifl.......
mig_mouse   39  .....dpds.aNVKKLMKe.........
inig_rat    40  .....npes.eAIKSLLK..........
1prtF       46  eh...dtwf.dTMLGFAIsayalksria
1sap        32  .....ekdapkELLDMLAraerekk...
1lt5D       42  qhidsqkkaieRMKDTLRityltetki.
1btn        37  .....qakddeEMNTWIQaissa.....

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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