1pfc - reference 1
Name immunoglobulin PFc fragment
Number of sequences 5
Alignment Length 123
Longest Sequence 117
Shortest Sequence 108
Average Percent Identity 28
Maximum Percent Identity 39
Minimum Percent Identity 23
Sequence Name SWISSPROT Accession
gc2_cavpo P01862
alc_mouse P01878
1yuh P01726
1mim P01834
1nld P01864
Family gc2_cavpo alc_mouse 1yuh 1mim 1nld
gc2_cavpo 1 .ktisktkgaprmPDVYTLPPSRDEL.skskvSVTCLIINFFPADIHVEW
alc_mouse 1 ..tiakvtvntfpPQVHLLPPPSEELlanellSLTCLVRAFNPKEVLVRW
1yuh 1 .tkltvlgqpkssPSVTLFPPSSEEL.etnkaTLVCTITDFYPGVVTVDW
1mim 1 gtkleikr.tvaaPSVFIFPPSDEQL.ksgtaSVVCLLNNFYPREAKVQW
1nld 1 .ttvtvssasttaPSVYPLAPVSGDQ.tnssvTLGCLVKGYFPEPVTLTW
gc2_cavpo 49 asnrvvsekpeykntppieda.......dgSYFLYSKLTVDKSAWDQGTV
alc_mouse 49 lhgn....eelspesylveplkepgfegatTYLVTSVLRVSAETWKQGDQ
1yuh 49 kvdgtpvtegmettqpskqs........nnKYMASSYLTLSARAWERHAS
1mim 49 kvdnalqsgnsqesvteqdsk.......dsTYSLSSTLTLSKADYEKHKV
1nld 49 nsg..slssgvhtfpavlqs.........dLYTLSSSVTVTSSPWPS.ET
gc2_cavpo 92 YTCSVMHealhnhvtqkaisrsp
alc_mouse 95 YSCMVGHealpmnftqktidrls
1yuh 91 YSCQVTHeg..htve.kslsra.
1mim 92 YACEVTHqglsspvt.ksfnrg.
1nld 87 ITCNVAHpasstkvdkkieprg.
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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