1thm1 - reference 5


Name                 thermitase

Number of sequences              11
Alignment Length                 287
Longest Sequence                 231
Shortest Sequence                175
Average Percent Identity         32
Maximum Percent Identity         49
Minimum Percent Identity         21

Sequence Name    SWISSPROT Accession
proa_vibal           P16588         
isp_paepo            P29139         
p3p_laclc            P15292         
bprx_bacno           P42780         
subv_bacsu           P29141         
subt_bacs9           P28842         
prtt_trial           P20015         
oryz_aspor           P12547         
isp6_schpo           P40903         
aep_yarli            P09230         
scpa_strpy           P15926         

Family   proa_vibal isp_paepo p3p_laclc bprx_bacno subv_bacsu subt_bacs9 prtt_trial oryz_aspor isp6_schpo aep_yarli scpa_strpy


proa_vibal   1  iwgldridqrnlpldn...nysanfdgtgvtaYVIDTGvnnahvefgg..
isp_paepo    1  prgvemi.qapavwnq........trgrgvkvAVLDTGcdadhpdlka..
p3p_laclc    1  ...manvqavwsnyk.........ykgegtvvSVIDSGidpthkdmrlsd
bprx_bacno   1  yyseygv.kadkvwdrg.......itgkgvtvAVVDTGiv.nhpdlna..
subv_bacsu   1  ddsapyi.gandawdlg.......ytgkgikvAIIDTGveynhpdlkk..
subt_bacs9   1  .wgikaiynnssitqt........sgggginiAVLDTGvntnhpdlrn..
prtt_trial   1  .issqepggttytydd........sagtgtcaYIIDTGiytnhtdfgg..
oryz_aspor   1  pwglgsishkgqqstd...yiydtsagegtyaYVVDSGvnvdheefeg..
isp6_schpo   1  pwglarishksvkyddigkyvydssagdnitaYVVDTGvsihhvefeg..
aep_yarli    1  qwglsrishkkaqtgn.yayvretvgkhptvsYVVDSGirtthsefgg..
scpa_strpy   1  .dlndpsqvktlqeka........gkgagtvvAVIDAGfdknheawrltd

proa_vibal  46  .............................rsvsGYDFvdndada......
isp_paepo   40  .............................riigGRNFtdddeg.......
p3p_laclc   39  dkdvkltksdvekftdtvkh...gryfnskvpyGFNYadnndt.......
bprx_bacno  40  ...........................nvipgsGYDFiqeaeiaqdgdgr
subv_bacsu  41  ...........................nfgqykGYDFvdndyd.......
subt_bacs9  40  .......................nveqckdftvGTTYt.nnsct......
prtt_trial  40  .............................rakfLKNFagdgqdt......
oryz_aspor  46  .............................raskAYNAa.ggqhv......
isp6_schpo  49  .............................raswGATIp.sgdvde.....
aep_yarli   48  .............................ravwGANFa.dtqna......
scpa_strpy  42  ktkaryqskedlekakkehgitygewvndkvayYHDYskdgkta......

proa_vibal  61  ..........................sdcngHGTHVAGtiggs.......
isp_paepo   54  ....................dpeifk.dyngHGTHVAGtiaaten.....
p3p_laclc   79  .....................itddkvd.eqHGMHVAGiigangtg.ddp
bprx_bacno  63  dsnpadagdwhsnwacgkypdpryekrnsswHGSHVAGtiaavtn....n
subv_bacsu  57  ................pketptgdprgeatdHGTHVAGtvaang......
subt_bacs9  60  ...........................drqgHGTHVAGsaladggt....
prtt_trial  55  ...........................dgngHGTHVAGtvggt.......
oryz_aspor  60  ...........................dsigHGTHVSGtiagk.......
isp6_schpo  64  ...........................dnngHGTHVAGtiasr.......
aep_yarli   62  ...........................dllgHGTHVAGtvggk.......
scpa_strpy  86  ...........................vdqeHGTHVSGilsgnapsetke

proa_vibal  78  ...lygvaknvnlvgvrvlscsgs...gstsgviagvdwvaanas.....
isp_paepo   78  engvvgvapeadlliikvlnkqgs...gqydwiiqgiyyaieq.......
p3p_laclc  106  aksvvgvapeaqllamkvfsnsdtsaktgsatvvsaiedsaki.......
bprx_bacno 109  rigvsgvaydakivpvrvlgrcg....gynsdinegmywaagghidgvpd
subv_bacsu  85  ..tikgvapdatllayrvlgpggs...gttenviagveravqd.......
subt_bacs9  79  gngvygvapdadlwaykvlgddgs...gyaddiaaairhagdqataln..
prtt_trial  71  ...tygvakktslfavkvldangq...gsnsgviagmdfvtkdassqncp
oryz_aspor  76  ...tygiakkasilsvkvfqgess....stsvildgfnwaandivskkrt
isp6_schpo  80  ...aygvakkaeivavkvlrssgs...gtmadviagvewtvrhhkssgk.
aep_yarli   78  ...tygvdantklvavkvfagrsa....alsvinqgftwalndyiskrdt
scpa_strpy 109  pyrlegampeaqlllmrveivngla..dyarnyaqairdavnl.......

proa_vibal 117  ...gpsvanmslggg......qsvaldsavqsavqsgvsfmlaagnsnad
isp_paepo  118  ...kvdiismslggp.....edvpelheavkkavasqilvmcaagnegdg
p3p_laclc  149  ...gadvlnmslgsnsgnqtledpel.aavqnanesgtaavisagnsgts
bprx_bacno 155  nkhpaqvinmslggp....gvcgsteqtlinratqlgatiivaagndnid
subv_bacsu 123  ...gadvmnlslgns...lnnpdwatstaldwamsegvvavtsngnsgpn
subt_bacs9 124  ...tkvvinmslgss.....gesslitnavnysynkgvliiaaagnsgpy
prtt_trial 115  ...kgvvvnmslggp.....sssavnraaaeitsa.glflavaagneatd
oryz_aspor 119  ...skaainmslggg......yskafndavenafeqgvlsvvaagnensd
isp6_schpo 123  ...ktsvgnmslggg......nsfvldmavdsavtngviyavaagneydd
aep_yarli  121  l..prgvlnfsgggp......ksasqdalwsratqegllvaiaagndavd
scpa_strpy 150  ...gakvinmsfgnaalayanlpdetkkafdyakskgvsivtsagndssf

proa_vibal 158  ac.................nysparvatgvtvgstts
isp_paepo  160  ddrtde.............lgypgcynevisvgainf
p3p_laclc  195  gsategvnkdyyglqdnemvgspgtsrgattvasaen
bprx_bacno 201  ay.................gvtpascdniltvgatts
subv_bacsu 167  gwt................vgspgtsreaisvgatql
subt_bacs9 166  qgs................igypgalvnavavaalen
prtt_trial 156  ass.................sspaseesactvgatdk
oryz_aspor 160  ag.................qtspasapdaitvaaiqk
isp6_schpo 164  ac.................ysspaaskkaitvgasti
aep_yarli  163  acndsp.............gniggstsgiitvgsids
scpa_strpy 197  ggktrlpladh...pdygvvgtpaaadstltvasysp

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index