1thm - reference 1
Name serine protease
Number of sequences 4
Alignment Length 293
Longest Sequence 279
Shortest Sequence 269
Average Percent Identity 49
Maximum Percent Identity 69
Minimum Percent Identity 36
Sequence Name SWISSPROT Accession
1st3 P29599
1sbc P00780
1sbt P00782
2prk P06873
Family 1st3 1sbc 1sbt
Family 2prk
1st3 1 .GQS.VPWGISRVq.....apaahnrgltGSGVKVAVLDTGI.STHPDL.
1sbc 1 .AQT.VPYGIPLIk.....adkvqaqgfkGANVKVAVLDTGIQASHPDL.
1sbt 1 .AQS.VPYGVSQIk.....apalhsqgytGSNVKVAVIDSGIDSSHPDL.
2prk 1 aAQTNAPWGLARIsstspgtstyyydesaGQGSCVYVIDTGIEASHPEFe
1st3 42 .nirggasfvpgepst.qDGNGHGTHVAGTIAALNNSIGVLGVAPSAELY
1sbc 43 .nvvggasfvageayn.tDGNGHGTHVAGTVAALDNTTGVLGVAPSVSLY
1sbt 43 .kvaggasmvpsetpnfqDDNSHGTHVAGTVAALNNSIGVLGVAPSSALY
2prk 51 graqmvktyyyss....rDGNGHGTHCAGTVGS.....RTYGVAKKTQLF
1st3 90 AVKVLGADGRGAISSIAQGLEWagnng.......mhVANLSLGSPSPSAT
1sbc 91 AVKVLNSSGSGSYSGIVSGIEWattng.......mdVINMSLGGASGSTA
1sbt 92 AVKVLGDAGSGQYSWIINGIEWaiann.......mdVINMSLGGPSGSAA
2prk 92 GVKVLDDNGSGQYSTIIAGMDFvasdknnrncpkgvVASLSLGGGY.SSS
1st3 133 LEQAVNSATSRGVLVVAASGNsga....ssisyPARYANAMAVGATDQNN
1sbc 134 MKQAVDNAYARGVVVVAAAGNsgnsgstntigyPAKYDSVIAVGAVDSNS
1sbt 135 LKAAVDKAVASGVVVVAAAGNegstgssstvgyPGKYPSVIAVGAVDSSN
2prk 141 VNSAAARLQSSGVMVAVAAGNnna...darnysPASEPSVCTVGASDRYD
1st3 179 NRASFSQYGAGLDIVAPGVNVQSTYPGSTYASLNGTSMATPHVAGAAALV
1sbc 184 NRASFSSVGAELEVMAPGAGVYSTYPTNTYATLNGTSMASPHVAGAAALI
1sbt 185 QRASFSSVGPELDVMAPGVSIQSTLPGNKYGAYNGTSMASPHVAGAAALI
2prk 188 RRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYL
1st3 229 KQKNPSWSNVQIRNHLkntatslgstnl.ygs.glvnaeaatr
1sbc 234 LSKHPNLSASQVRNRLsstatylgssfy.ygk.glinveaaaq
1sbt 235 LSKHPNWTNTQVRSSLqntttklgdsfy.ygk.glinvqaaaq
2prk 238 MTLGKTTAASACR.YIadtankgdlsnipfgtvnllaynnyqa
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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