1gpb - reference 1
Name glycogen phosphorylase b
Number of sequences 5
Alignment Length 854
Longest Sequence 828
Shortest Sequence 796
Average Percent Identity 47
Maximum Percent Identity 61
Minimum Percent Identity 43
Sequence Name SWISSPROT Accession
gpb P00489
ahpA P00490
ygpA P06738
phsg_ecoli P13031
phsg_haein P45180
Family gpb ahpA ygpA phsg_ecoli phsg_haein
gpb 1 .agvenvtelkknFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVgr.
ahpA 1 sqpifndkqfqeaLSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRaqp
ygpA 1 vkkfnkaedfqdrFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVid.
phsg_ecoli 1 .....svealkhsIAYKLMFTIGKDPVVANKHEWLNATLFAVRDRLVer.
phsg_haein 1 ......veaikksIVYKLIFLIGRSPREASQRDWLNATLHAVRDLVTeg.
gpb 49 wirtqqhyyekdpkriyYLSLEFYMGRTLQNTMVNLAL.ENACDEATYQL
ahpA 51 fakpvanq.....rhvnYISMEFLIGRLTGNNLLNLGW.YQDVQDSLKAY
ygpA 50 wnktqqkfttrdpkrvyYLSLEFLMGRALDNALINMKIPREMIKGALDEL
phsg_ecoli 45 wlrsnraqlsqetrqvyYLSMEFLIGRTLSNAMLSLGI.YEDVQGALEAM
phsg_haein 44 wittarqtraedsrrvyYLSMEFLIGRTLSNAMIAEGI.YGLAQEALSEL
gpb 98 GLDMEELEEiee.DAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFG
ahpA 95 DINLTDLLE.eeiDPALGAGGLGRLAACFLDSMATVGQSATGYGLNYQYG
ygpA 100 GFKLEDVLD.qepDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYG
phsg_ecoli 94 GLNLEELID.eenDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYG
phsg_haein 93 NVDLEEVLE.kevDPGLGNGGLGRLAACFMDSIATLGLPGMGYGIRYEYG
gpb 147 IFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVehts..qg
ahpA 144 LFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGAVtkdg....
ygpA 149 IFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVdrpttlsa
phsg_ecoli 143 MFKQNIVNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIqqeg..kk
phsg_haein 142 MFRQKIENGQQVERPDAWLEKGAPWEFIRPSKRFTVEFGGNIhfeg..kk
gpb 195 akWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGY
ahpA 190 .rWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDF
ygpA 199 sqWIGGERVLAVAYDFPVPGFKTSNVNNLRLWQARPTTEFDLNKFNNGDY
phsg_ecoli 191 trWIETEEILGVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDY
phsg_haein 190 ciWQDTEKVTALAYDQMIPGYQNNSAATLRLWSAHAGEVFNLADFNRGEH
gpb 245 IQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK
ahpA 239 LRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHH
ygpA 249 KNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFK
phsg_ecoli 241 FAAVEDKNHSENVSRVLYPDDSTYSGRDVRLRQEYFLVSSTIQDILSRHY
phsg_haein 240 LAALEEHSANKNLSRVLYPDDSTWNGRELRLRQEYFLVSASLQDILRRHK
gpb 295 SSkfgcrdpvrtnFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWD
ahpA 289 LAg........reLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWD
ygpA 299 KSk........rpWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWH
phsg_ecoli 291 QLh........ktYDNLADKIAIHLNDTHPVLSIPEMMRLLIDEHQFSWD
phsg_haein 290 RTh........nsLENLADKVAIHLNDTHPALAIPELMRILVDDEGFEWK
gpb 345 KAWEVTVKTCAYTNHTVIPEALERWPVHLLETLLPRHLQIIYEINQRFLN
ahpA 331 DAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKT
ygpA 341 EAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFFLE
phsg_ecoli 333 DAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLK
phsg_haein 332 KAWEMTRNIFSYTCHTLMSEALETWPVEMMAKILPRHLQMIFEINDHFLE
gpb 395 RVAAAFPGDVDRLRRMSLVEEga.vKRINMAHLCIAGSHAVNGVARIHSE
ahpA 381 LVEKTWPGDEKVWAKLAVVHD....KQVHMANLCVVGGFAVNGVAALHSD
ygpA 391 DVAKKFPKDVDLLSRISIIEEnspeRQIRMAFLAIVGSHKVNGVVELHSE
phsg_ecoli 383 TLQEQYPNDTDLLGRASIIDEsn.gRRVRMAWLAVVVSHKVNGVSELHSN
phsg_haein 382 YVRTYVTTDNDFIRRVSLIEEgy.qRKVRMGWLSVVGSHKINGVAEIHSD
gpb 444 ILKKTIFKDFYELE.PHKFQNKTNGITPRRWLVLCNPGLAEIIAERIg..
ahpA 427 LVVKDLFPEYHQLW.PNKFHNVTNGITPRRWIKQCNPALAALLDKSLq..
ygpA 441 LIKTTIFKDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLndp
phsg_ecoli 432 LMVQSLFADFAKIF.PGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLg..
phsg_haein 431 LMVTSTFADFARIF.PERFTNVTNGITPRRWLAVANPQLAALFDKYIg..
gpb 491 .eEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREy.kvh
ahpA 474 .kEWANDLDQLINLVKLADDAKFRDLYRVIKQANKVRLAEFVKVRt.gid
ygpA 491 teEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKEndgvd
phsg_ecoli 479 .rNWRTDLSLLNELQQHCDFPMVNHAVHQAKLENKKRLAEYIAQQl.nvv
phsg_haein 478 .sEWRCDLSQIEKLKPFAQEKAFKEAVADIKFANKVKLAEYVKSEl.gve
gpb 539 .inp....nSLFDVQVKRIHEYKRQLLNCLHVITLYNRIkk........e
ahpA 522 .inp....qAIFDIQIKRLHEYKRQHLNLLRILALYKEIre........n
ygpA 541 iinreylddTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMknmlkngasie
phsg_ecoli 527 .vnp....kALFDVQIKRIHEYKRQLMNVLHVITRYNRIka........d
phsg_haein 526 .ldp....hALFDVQVKRIHEYKRQMLNVLHIIARYNEMlt........n
gpb 576 pnkfvvPR.TVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRV
ahpA 559 pqadrvPR.VFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKV
ygpA 591 evarkyPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKV
phsg_ecoli 564 pdakwvPR.VNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
phsg_haein 563 pekdwqPR.VFILAGKAASAYYAAKQTIHLINDVANVINNDERLKGRLKV
gpb 625 IFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTM
ahpA 608 VFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTL
ygpA 641 VFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTV
phsg_ecoli 613 VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTL
phsg_haein 612 VFIPNYSVSLAQLIIPAADISEQISLAGTEASGTSNMKFALNGALTLGTL
gpb 675 DGANVEMAEEAGEENFFIFGMRVEDVDRLdqrgynaqEYYDRi..pELRQ
ahpA 658 DGANVEIAEKVGEENIFIFGHTVKQVKAIlakgydpvKWRKKd..kVLDA
ygpA 691 DGANVEITREIGEDNVFLFGNLSENVEELr...ynh.QYHPQdlpsSLDS
phsg_ecoli 663 DGANVEMLDHVGADNIFIFGNTAEEVEELrrqgykprEYYEKd..eELHQ
phsg_haein 662 DGANVEILENVGEDNIFIFGNTVEQVEQLrregyrsfEYYQNd..aQLRT
gpb 723 IIEQLSSGFFSPKQPDLFKDIVNMLmhh..DRFKVFADYEEYVKCQERVS
ahpA 706 VLKELESGKYSDGDKHAFDQMLHSIgkqggDPYLVMADFAAYVEAQKQVD
ygpA 737 VLSYIESGQFSPENPNEFKPLVDSIkyhg.DYYLVSDDFESYLATHELVD
phsg_ecoli 711 VLTQIGSGVFSPEDPGRYRDLVDSLinfg.DHYQVLADYRSYVDCQDKVD
phsg_haein 710 VVDQIIEGKFSPEDPQRYHQLLQGLqyh..DYYQAFADFRSYVETQKAVD
gpb 771 ALYKNPR.EWTRMVIRNIATSGKFSSDRTIAQYAREIWgvepsrqrlpap
ahpA 756 VLYRDQE.AWTRAAILNTARCGMFSSDRSIRDYQARIWqaar........
ygpA 786 QEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWnvepv.......
phsg_ecoli 760 ELYELQE.EWTAKAMLNIANMGYFSSDRTIKEYADHIWhidpvr......
phsg_haein 758 EKYKQRD.QWIESTIQNIVNMGFFSSDRTIKEYAERIWkvepvq......
gpb 820 deki
ahpA 797 ....
ygpA 829 ....
phsg_ecoli 803 ....
phsg_haein 801 ....
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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