1ac5 - reference 1


Name                 carboxypeptidase									

Number of sequences              4
Alignment Length                 524
Longest Sequence                 483
Shortest Sequence                421
Average Percent Identity         29
Maximum Percent Identity         35
Minimum Percent Identity         27

Sequence Name    SWISSPROT Accession
1ac5                 P09620         
1ivy                 P10619         
1ysc                 P00729         
CBP3_ORYSA           P37891         

Family   1ac5 1ivy 1ysc CBP3_ORYSA


1ac5         1  ..lpsseeykvayellpglsevpdpsnipqmHAGHIPLrsedadeqdssd
1ivy         1  ......apdqdeiqrlpgla..kqps..frqYSGYLKS.........sgs
1ysc         1  .........kikdpkilgi....dpn..vtqYTGYLDV........eded
CBP3_ORYSA   1  vpsvapgellerrvtlpglp.qgvgd..lghHAGYYRLp.......nthd

1ac5        49  lEYFFWKFTNndsngnvDRPLIIWLNGGPGCSSMDGALVESGPFRVNSdg
1ivy        32  kHLHYWFVESqkdpen..SPVVLWLNGGPGCSSLDGLLTEHGPFLVQPdg
1ysc        28  kHFFFWTFESrndpak..DPVILWLNGGPGCSSLTGLFFELGPSSIGPd.
CBP3_ORYSA  41  aRMFYFLFESrgkke...DPVVIWLTGGPGCSSELAVFYENGPFTISNn.

1ac5        99  .klylNEGSWISKGDLLFIDQPTGTGFSVEqnkdegkidknkfdedledV
1ivy        80  vtleyNPYSWNLIANVLYLESPAGVGFSYSddk........fyatndteV
1ysc        75  lkpigNPYSWNSNATVIFLDQPVNVGFSYSgssg.........vsntvaA
CBP3_ORYSA  87  mslawNKFGWDTISNIIFVDQPTGTGFSYSsddrdtr.......hdetgV

1ac5       148  TKHFMDFLENYFKIFPEDLTr..KIILSGESYAGQYIPFFANAILnhnkf
1ivy       122  AQSNFEALQDFFRLFPEYKNn..KLFLTGESYAGIYIPTLAVLVMqdp..
1ysc       116  GKDVYNFLELFFDQFPEYVNkgqDFHIAGESYAGHYIPVFASEILshkdr
CBP3_ORYSA 130  SNDLYSFLQVFFKKHPEFAKn..DFFITGESYAGHYIPAFASRVHqgnka

1ac5       196  skidgdtYDLKALLIGNGWIDPNTQSLSYLPFAMekklid..esnpnfkh
1ivy       168  ......sMNLQGLAVGNGLSSYEQNDNSLVYFAYyhgllg.......nrl
1ysc       166  n......FNLTSVLIGNGLTDPLTQYNYYEPMACgeggepsvlpseecsa
CBP3_ORYSA 178  n..egihINLKGFAIGNGLTDPAIQYKAYTDYALdmnlik....ksdydr

1ac5       244  ltnahencqnlinsastdeaahfsyqecenilnlllsytressqkgtadc
1ivy       205  wsslqthccsqnkcnfyd....nkdlecvtnlqevarivgnsglniynly
1ysc       210  medslerclgliescyds....qsvwscvpatiycnnaqlapyqrtg...
CBP3_ORYSA 222  inkfippcefaiklcgt.....ngkascmaaymvcnsifssimklvgt..

1ac5       294  ln..............................mynfnlkdsypscgmnwp
1ivy       251  apcaggvpfryekdtvvvqdlgniftrlplkrmwhqallrsgdkvrmdpp
1ysc       253  ................................rnvydirkdceggnlcyp
CBP3_ORYSA 265  ................................knyydvrkeceg.klcyd

1ac5       314  .kdisfvskFFSTPGVIDSLhldsdkidhWKECTNSVgtkl..snpISKP
1ivy       301  ctnttaastYLNNPYVRKALni.peqlpqWDMCNFLVnlqy..rrlYRSM
1ysc       271  ..tlqdiddYLNQDYVKEAVga...evdhYESCNFDInrnflfagdWMKP
CBP3_ORYSA 282  ...fsnlekFFGDKAVKEAIgv...gdleFVSCSTTVyqam..ltdWMRN

1ac5       361  SIHLLPGLLESGIEIVLFNGDKDLICNNKGVLDTIDNLkwggikgfsdda
1ivy       348  NSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLnqk......mev
1ysc       316  YHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLpwkydeefas.q
CBP3_ORYSA 324  LEVGIPALLEDGINVLIYAGEYDLICNWLGNSRWVHSMewsg........

1ac5       411  vsfdwihk.skstddseefSGYVKYDRNLTFVSVYNASHMVPFDKSLVSR
1ivy       392  qrrpwlvk...ygdsgeqiAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF
1ysc       365  kvrnwtas......itdevAGEVKSYKHFTYLRVFNGGHMVPFDVPENAL
CBP3_ORYSA 366  .qkdfvsshespfvvdgaeAGVLKSHGPLSFLKVHNAGHMVPMDQPKASL

1ac5       460  GIVDIYSNdvmiidnngknvmitt
1ivy       439  TMFSRFLNkqpy............
1ysc       409  SMVNEWIHggfsl...........
CBP3_ORYSA 415  EMLRRFTQgkl.............

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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