1ubi - reference 2
Name ubiquitin cysteine
Number of sequences 17
Alignment Length 117
Longest Sequence 97
Shortest Sequence 76
Average Percent Identity 32
Maximum Percent Identity 71
Minimum Percent Identity 11
Sequence Name SWISSPROT Accession
1awd P56408
fer1_anasp P06543
fer1_cyaca P15789
fer1_equar P00235
fer_medsa P00220
fer2_equte P00236
ferv_anava P46047
fer2_synp6 P08451
dmpp_psepu P19734
memc_metca P22868
rfbi_salty P26395
xylz_psepu P23101
ascd_yerps P37911
yfae_ecoli P37910
1guaB P10113
2pia P33164
1alo Q46509
Family 1awd fer1_anasp fer1_cyaca fer1_equar fer_medsa fer2_equte ferv_anava fer2_synp6 dmpp_psepu memc_metca rfbi_salty xylz_psepu ascd_yerps yfae_ecoli
Family 1guaB
Family 2pia
Family 1alo
1awd 1 ......YKVTLkt.psg.eeTIECPEDTYILDAAEEA.gld.LPYSCRAG
fer1_anasp 1 ......FKVTLineaegtkhEIEVPDDEYILDAAEEQ.gyd.LPFSCRAG
fer1_cyaca 1 ......YKIQLvnqkegvdvTINCPGDQYILDAAEEQ.gvd.LPYSCRAG
fer1_equar 1 ......YKTVLkt.psg.efTLDVPEGTTILDAAEEA.gyd.LPFSCRAG
fer_medsa 1 ......YKVKLvt.peg.tqEFECPDDVYILDHAEEE.giv.LPYSCRAG
fer2_equte 1 ......YKVTLkt.pdg.diTFDVEPGERLIDIASEK..ad.LPLSCQAG
ferv_anava 1 ......YQVRLinkkraidiTIPVDENTTILDAAEQQ.die.LPFSCQSG
fer2_synp6 1 ......YQVEViy..qgqsqTFTADSDQSVLDSAQAA.gvd.LPASCLTG
dmpp_psepu 1 ......YNVTIe..ptg..eVIEVEDGQTILQAALRQ.gvw.LPFACGHG
memc_metca 1 ......HTITAvt.edgeslRFECRSDEDVITAALRQ.nif.LMSSCREG
rfbi_salty 1 ....msHIIKIf..psn..iEFSGREDESILDAALSA.gih.LEHSCKAG
xylz_psepu 1 ......HKVATdf.edgvtrFIDANTGETVADAAYRQ.gin.LPLDCRDG
ascd_yerps 1 .....sLNVKLh..psg..iIFTSDGTSTILDAALDS.nih.IEYSCKDG
yfae_ecoli 1 .....mARVTLri..tg.tqLLCQDEHPSLLAALESH.nva.VEYQCREG
1guaB 1 ......NTIRVfl.pnkqrtVVNVRNGMSLHDCLMKAlkvrgLQPEC...
2pia 1 arentpFTVRLs..rsg..tSFEIPANRSILEVLRDA.nvr.VPSSCESG
1alo 1 ......MIQKVit.vngieqNLFVDAEALLSDVLRQQlgltgVKVGCEQG
1awd 41 ACSSCAGKVEsgevdqsdqs.flddaqmg....kgfvl.....TCVAYPT
fer1_anasp 43 ACSTCAGKLVsgtvdqsdqs.fldddqie....agyvl.....TCVAYPT
fer1_cyaca 43 ACSTCAGKLVkgsvdqsdqs.fldeeqin....ngfil.....TCVAYPT
fer1_equar 41 ACSSCLGKVVsgsvdesegs.flddgqme....egfvl.....TCIAIPE
fer_medsa 41 SCSSCAGKVAagevnqsdgs.fldddqie....egwvl.....TCVAYAK
fer2_equte 40 ACSTCLGKIVsgtvdqsegs.flddeqie....qgyvl.....TCIAIPE
ferv_anava 43 SCSSCVAKVVegevdqseqv.fldeeqma....kgfiv.....LCVSYPR
fer2_synp6 41 VCTTCAARILsgevdqpdam.gvgpepak....qgytl.....LCVAYPR
dmpp_psepu 39 TCATCKVQVVegevdigeaspfalmdierd...erkvl.....ACCAIPL
memc_metca 42 GCATCKALCSegdydlkgcsvqalppeeee...eglvl.....LCRTYPK
rfbi_salty 41 DCGICESDLLagevvdskgnifg..........qgdkil....TCCCKPK
xylz_psepu 42 ACGACKCFAEsgryslgee..yiedalseaeaeqgyvl.....TCQMRAE
ascd_yerps 40 TCGSCKAILIsgevdsaent.flteedva....kgail.....TCCSKAK
yfae_ecoli 41 YCGSCRTRLVagqvd......wiaeplafiq..pgeil.....PCCCRAK
1guaB 41 ....CAVFRLlheh...................kgkkarldwnTDAASLI
2pia 45 TCGSCKTALCsgeadhrdm..vlrdde......kgtqim....VCVSRAK
1alo 44 QCGACSVILD........................gkvvr....ACVTKMK
1awd 81 S...DVTILThqeaaly
fer1_anasp 83 S...DVVIQThkeedl.
fer1_cyaca 83 S...DCVIQThqeeal.
fer1_equar 81 S...DLVIEThkeeel.
fer_medsa 81 S...DVTIEThkeeel.
fer2_equte 80 S...DVVIEThkedel.
ferv_anava 83 S...DCTIRThqepyl.
fer2_synp6 81 S...DLKIEThkedel.
dmpp_psepu 81 S...DLVIEAdvda...
memc_metca 84 T...DLEIELpythcr.
rfbi_salty 77 T...ALELNAhffpel.
xylz_psepu 85 S...DCVIRVpaasdv.
ascd_yerps 80 S...DIELDVnyypel.
yfae_ecoli 78 G...DIEIEM.......
1guaB 68 G..eELQVDFl......
2pia 83 S..aELVLDL.......
1alo 66 RvadGAQITTiegvgq.
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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