S52 - reference 5


Name                 nuclear receptor

Number of sequences              5
Alignment Length                 338
Longest Sequence                 334
Shortest Sequence                224
Average Percent Identity         29
Maximum Percent Identity         37
Minimum Percent Identity         23

Sequence Name    SWISSPROT Accession
THA1_HUMAN           P21205         
E75A_DROME           P17671         
ROR2_HUMAN           P35398         
RRA1_HUMAN           P10276         
EAR1_HUMAN           P20393         

Family   THA1_HUMAN E75A_DROME ROR2_HUMAN RRA1_HUMAN EAR1_HUMAN


THA1_HUMAN   1  PTPEEWDLIHIATEAHrstnaqg.....shwkqrrkflpdd.igqspivs
E75A_DROME   1  ELDDQPRLLAAVLRAHlet.........ceftkekvsamrqrardcpsys
ROR2_HUMAN   1  SMAELEHLAQNISKSHlet.........cqylreelqqitwqtflqeeie
RRA1_HUMAN   1  LTPEVGELIEKVRKAHqetfpal.....cqlgkyttnnsseqr.......
EAR1_HUMAN   1  PEPTVEDVISQVARAHreiftyahdklgsspgnfnanhasgsppattphr

THA1_HUMAN  45  mpdg..............................................
E75A_DROME  42  mptllacp..........................................
ROR2_HUMAN  42  nyqn..............................................
RRA1_HUMAN  39  ..................................................
EAR1_HUMAN  51  wenqgcppapndnntlaaqrhnealnglrqapssypptwppgpahhschq

THA1_HUMAN  49  ..................................................
E75A_DROME  50  ................................................ln
ROR2_HUMAN  46  ..................................................
RRA1_HUMAN  39  ................................................vs
EAR1_HUMAN 101  snsnghrlcpthvyaapegkapansprqgnsknvllacpmnmyphgrsgr

THA1_HUMAN  49  dkvdleafseftkiitpaitrvVDFAKKLPMFSELPCEDqiillkgccme
E75A_DROME  52  papelqseqefsqrfahvirgvIDFAGMIPGFQLLTQDDkftllkaglfd
ROR2_HUMAN  46  kqrevm.wqlcaikiteaiqyvVEFAKRIDGFMELCQNDqivllkagsle
RRA1_HUMAN  41  ldidl..wdkfselstkciiktVEFAKQLPGFTTLTIADqitllkaacld
EAR1_HUMAN 151  tvqei..wedfsmsftpavrevVEFAKHIPGFRDLSQHDqvtllkagtfe

THA1_HUMAN  99  imslraavrydpesdtltlsgemavkreqlkngglgvvs.daifelgksl
E75A_DROME 102  alfvrlicmfdssinsiiclngqvmrrdaiqnganarflvdstfnfaerm
ROR2_HUMAN  95  vvfirmcrafdsqnntvyf.dgkyaspdvfkslgcedfi.sfvfefgksl
RRA1_HUMAN  89  ililrictrytpeqdtmtfsdgltlnrtqmhnagfgplt.dlvfafanql
EAR1_HUMAN 199  vlmvrfaslfnvkdqtvmflsrttyslqelgamgmgdll.samfdfsekl

THA1_HUMAN 148  safnlddtevallqavllmstdrsgllcvdkieksqeayllafehyvnhr
E75A_DROME 152  nsmnltdaeiglfcaivlitpdrpglrnleliekmysrlkgclqyivaqn
ROR2_HUMAN 143  csmhltedeialfsafvlmsadrswlqekvkieklqqkiqlalqhvlqkn
RRA1_HUMAN 138  lplemddaetgllsaiclicgdrqdleqpdrvdmlqepllealkvyvrkr
EAR1_HUMAN 248  nslalteeelglftavvlvsadrsgmensasveqlqetllralralvlkn

THA1_HUMAN 198  khniphfwpkllmkvtdlrmigachasrflhmkvecp.
E75A_DROME 202  rpdqpeflaklletmpdlrtlstlhteklvvfrtehke
ROR2_HUMAN 193  hredg.iltklickvstlralcgrhteklmafkaiypd
RRA1_HUMAN 188  rpsrphmfpkmlmkitdlrsisakgaervitlkmeip.
EAR1_HUMAN 298  rpletsrftklllklpdlrtlnnmhsekllsfrvdaq.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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