5ptp - reference 1


Name                 serine protease		

Number of sequences              5
Alignment Length                 262
Longest Sequence                 245
Shortest Sequence                222
Average Percent Identity         43
Maximum Percent Identity         65
Minimum Percent Identity         36

Sequence Name    SWISSPROT Accession
5ptp                 P00760         
2tbs                 P35031         
1ton                 P00759         
1pfa                 P07288         
1aao                 P20231         

Family   5ptp 2tbs 1ton 1pfa 1aao


5ptp         1  IVGGYTCGANTVPYQVSLNSg....yHFCGGSLINSQWVVSAAHCYksgi
2tbs         1  IVGGYECKAYSQAHQVSLNSg....yHFCGGSLVNENWVVSAAHCYksrv
1ton         1  IVGGYKCEKNSQPWQVAVINe.....YLCGGVLIDPSWVITAAHCYsnny
1pfa         1  IVGGWECEKHSQPWQVLVASrg...rAVCGGVLVHPQWVLTAAHCIrnks
1aao         1  IVGGQEAPRSKWPWQVSLRVhgpywmHFCGGSLIHPQWVLTAAHCVgpdv

5ptp        47  ......qvrLGEDNINVvegneQFISASKSIVHPSYns...........n
2tbs        47  ......evrLGEHNIKVtegseQFISSSRVIRHPNYss...........y
1ton        46  ......qvlLGRNNLFKdepfaQRRLVRQSFRHPDYiplivtndteqpvh
1pfa        48  ......vilLGRHSLFHpedtgQVFQVSHSFPHPLYdmsllknrflrpgd
1aao        51  kdlaalrvqLREQHLYY...qdQLLPVSRIIVHPQFyt...........a

5ptp        80  tLNNDIMLIKLKSAASLNSRVASISLPTSCASA..GTQCLISGWGNTKSS
2tbs        80  nIDNDIMLIKLSKPATLNTYVQPVALPTSCAPA..GTMCTVSGWGNTMSS
1ton        90  dHSNDLMLLHLSEPADITGGVKVIDLPTKEPKV..GSTCLASGWGSTNPS
1pfa        92  dSSHDLMLLRLSEPAELTDAVKVMDLPTQEPAL..GTTCYASGWGSIEPE
1aao        87  eIGADIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDND

5ptp       128  gtsypdv.lKCLKAPILSDSSCKSAYp.........gQITSNMFCAGyle
2tbs       128  .tadsdk.lQCLNIPILSYSDCNDSYp.........gMITNAMFCAGyle
1ton       138  emvvshd.lQCVNIHLLSNEKCIETYk.........dNVTDVMLCAGeme
1pfa       140  efltpkk.lQCVDLHVISNDVCAQVHp.........qKVTKFMLCAGrwt
1aao       137  erlpppfplKQVKVPIMENHICDAKYhlgaytgddvrIVRDDMLCAGntr

5ptp       168  ggKDSCQGDXGGPVVC..sg.klq.GIVSWGs.GCAQKNKPGVYTKVCNY
2tbs       167  ggKDSCQGDSGGPVVC..ng.elq.GVVSWGy.GCAEPGNPGVYAKVCIF
1ton       178  ggKDTCAGDSGGPLIC..dg.vlq.GITSGGatPCAKPKTPAIYAKLIKF
1pfa       180  ggKSTCSGDSGGPLVC..ng.vlq.GITSWGsePCALPERPSLYTKVVHY
1aao       187  ..RDSCQGDSGGPLVCkvngtwlqaGVVSWG.eGCAQPNRPGIYTRVTYY

5ptp       213  VSWIKQTIASN.
2tbs       212  SDWLTSTMASY.
1ton       224  TSWIKKVMKENp
1pfa       226  RKWIKDTIVANp
1aao       234  LDWIHHYVPKKp

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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