1ycc - reference 1


Name                 cytochrome e			

Number of sequences              4
Alignment Length                 127
Longest Sequence                 116
Shortest Sequence                90
Average Percent Identity         29
Maximum Percent Identity         40
Minimum Percent Identity         25

Sequence Name    SWISSPROT Accession
1ycc                 P00044         
1c2r                 P00094         
3c2c                 P00092         
1etp                 Q52369         

Family   1ycc 1c2r 3c2c
Family   1etp


1ycc         1  tefkaGSAKKGATLFKTRCLQCHTVEkg......gphkvgpnlhgiFGRH
1c2r         1  .....GDAAKGEKEFNK.CKTCHSIIapdgteivkgaktgpnlygvVGRT
3c2c         1  ....eGDAAAGEKVSKK.CLACHTFDqgg......ankvgpnlfgvFENT
1etp         1  ....aGDAEAGQGKVAV.CGACHGVD.........gnspapn....FPKL

1ycc        45  SGQAEGYSYTDAn..ikk...nvlwdENNM.SEYLTNPKKYIP.......
1c2r        45  AGTYPEFKYKDSi..valgasgfawtEEDI.ATYVKDPGAFLKekldd..
3c2c        40  AAHKDNYAYSESytemkak..gltwtEANL.AAYVKNPKAFVLeksgdpk
1etp        33  AGQGERYLLKQLq.dikag..stpgapegvgrkvlemtgmldp.......

1ycc        82  gtkmafgglkkekdrNDLITYLKKACe
1c2r        90  kkaktgmafklakggEDVAAYLASVVk
3c2c        87  akskmtfkltkddeiENVIAYLKTLK.
1etp        73  .........lsdqdlEDIAAYFSSQKg

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index