1fieA - reference 1


Name                 coagulation factor xiii			

Number of sequences              4
Alignment Length                 689
Longest Sequence                 675
Shortest Sequence                664
Average Percent Identity         34
Maximum Percent Identity         37
Minimum Percent Identity         33

Sequence Name    SWISSPROT Accession
tgl3_mouse           Q08189         
tglc_human           P21980         
tgl4_human           P49221         
tglh_tactr           Q05187         

Family   tgl3_mouse tglc_human tgl4_human tglh_tactr


tgl3_mouse   1  msalqiqnvnwqvpmNRRAHHTDKFSSQDSIVRRGQPWEIILVCNRSLES
tglc_human   1  ..maeelvle.rcdtNGRDHHTADLCREKLVVRRGQPFWLTLHFGRNYQA
tgl4_human   1  ...lqvlhidflnqdNAVSHHTWEFQTSSPVFRRGQVFHLRLVLNQPLQS
tglh_tactr   1  ...lqvesvelytrdNAREHNTFMYDKPVLILRRGQPFSIAIRFKRNYNP

tgl3_mouse  51  GED.LNFIVSTGPQPSESARTKAVFSISG.RSTGGWNAALKANSGNNLAI
tglc_human  48  SVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSL
tgl4_human  48  YHQ.LKLEFSTGPNPSIAKHTLVVLDPRTPSDHYNWQATLQNESGKEVTV
tglh_tactr  48  QQDRLKLEIGFGQQPLITKGTLIMLPVSGSKDKTQWDVRLRQHDGAVITL

tgl3_mouse  99  AIASPVSAPIGLYTLSVEISSRGRASs...lklgtfIMLFNPWLQADDVF
tglc_human  98  QLTTPANAPIGLYRLSLEASTGYQGSs...fvlghfILLFNAWCPADAVY
tgl4_human  97  AVTSSPNAILGKYQLNVKTGNHILKSe.....enilYLLFNPWCKEDMVF
tglh_tactr  98  EIQIPAAVAVGVWKMKIVSQLTSNVSavthecknktYILFNPWCKQDSVY

tgl3_mouse 146  MSNHAERQEYVEEDSGIIYVGSTNRIGMVGWNFGQFEEDILNISLSILDR
tglc_human 145  LDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDV
tgl4_human 142  MPDEDERKEYILNDTGCHYVGAARSIKCKPWNFGQFEKNVLDCCISLLTE
tglh_tactr 148  MEDEQWRKEYVLSDVGKIFTGSFKQPVGRRWIFGQFTDSVLPACMLILER

tgl3_mouse 196  SVTDVARRNDPKYVCRVLSAMINGNDDNGVISGNWSGNYTGGVDPRTWNG
tglc_human 195  AGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIG
tgl4_human 192  SSLKPTDRRDPVLVCRAMCAMMSFEKGQGVLIGNWTGDYEGGTAPYKWTG
tglh_tactr 198  SGLDYTARSNPIKVVRAISAMVNNIDDEGVLEGRWQEPYDDGVAPWMWTG

tgl3_mouse 246  SVEILKNWKKSGRPVQFGQCWVFAGTLNTVLRCLGVRSRVITNFNSAHDT
tglc_human 245  SVDILRRWKNHGQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQ
tgl4_human 242  SAPILQQYYNTKQAVCFGQCWVFAGILTTVLRALGIPARSVTGFDSAHDT
tglh_tactr 248  SSAILEKYLKTRVPVKYGQCWVFAGVANTVSRALGIPSRTVTNYDSAHDT

tgl3_mouse 296  DRNLSVDVYYDAMGNPLEK.GSDSVWNFHVWNEGWFVRTDLGPTYNGWQV
tglc_human 295  NSNLLIEYFRNEFGEIQGD.KSEMIWNFHCWVESWMTRPDLQPGYEGWQA
tgl4_human 292  ERNLTVDTYVNENGEKITSMTHDSVWNFHVWTDAWMKRP.....YDGWQA
tglh_tactr 298  DDTLTIDKWFDKNGDKIEDATSDSIWNFHVWNDCWMARPDLPTGYGGWQA

tgl3_mouse 345  LDATPQERSQGVFQCGPASVNAIKAGDVDRNFDMIFIFAEVNADRIWIYN
tglc_human 344  LDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQ
tgl4_human 337  VDATPQERSQGVFCCGPSPLTAIRKGDIFIVYDTRFVFSEVNGDRLIWLV
tglh_tactr 348  YDSTPQETSEGVYQTGPASVLAVQRGEIGYMFDSPFVFSEVNADVVHWQE

tgl3_mouse 395  NRNNTQKQNSVDTHSIGKYISTKAVGSNSRMDVTDKYKYPEGSSEERQVH
tglc_human 394  QDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAF
tgl4_human 387  KGQEELHVISMETTSIGKNISTKAVGQDRRRDITYEYKYPEGSSEERQVM
tglh_tactr 398  DDSSETGYKKIDSYRVGRLLLTKKIGVDDAEDITDQYKNKEGTDEERMSV

tgl3_mouse 445  QKald....fgatssrnpeged..kepsisgkfkvtgilaVGKEVSLSLM
tglc_human 444  TRanh........lnklaekee....tgmamrirvgqsmnMGSDFDVFAH
tgl4_human 437  DHafl.......llsserehrqpvkenflhmsvqsddvl.LGNSVNFTVI
tglh_tactr 448  LNaarssgfnyafnlpspeked........vyfnlekik.IGQPFHVTVN

tgl3_mouse 489  LKNMTNDRKTVTMNMTAWTIVYNGTLVHEVWKDSATISLDPEEEIQYPVK
tglc_human 482  ITNNTAEEYVCRLLLCARTVSYNGILGPECGKYLLNLTLEPFSEKSVPLC
tgl4_human 479  LKRKTAALQNVNILGSFELQLYTGKKMAKLCDLNKTSQIQG.QVSEVTLT
tglh_tactr 489  IENQSSETRRVSAVLSASSIYYTGITGRKIKRENGNFSLQPHQKEVLSIE

tgl3_mouse 539  IAYSQYERYLKADNMIRISAVCKVPDEAEVVV.EWDVILDNPALTLEVLE
tglc_human 532  ILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILG
tgl4_human 528  LDSKTYINILDDEPVIRGFIIAEIVESKEIMASEVFTSNQYPEFSIELPN
tglh_tactr 539  VTPDEYLEKLVDYAMIKLYAIATVKETQQTWSEEDDFMVEKPNLELEIRG

tgl3_mouse 588  QAHVRKPVNVQMIFSNPLDQPVNNCVLLVEGSGCSvaasrlmhpcv.pkE
tglc_human 582  EPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLT.eeqkeipdpveagE
tgl4_human 578  TGRIGQLLVCNCIFKNTLAIPLTDVKFSLESLGIS.slqtsdhgtvqpgE
tglh_tactr 589  NLQVGTAFVLAISLTNPLKRVLDNCFFTIEAPGVT.gafrvtnrdiqpeE

tgl3_mouse 637  KSRIRFEIFPTRSGTKQLLADFSCNKFPTIKAMLPIDVs
tglc_human 631  EVKVRMDLVPLHMGLHKLVVNFESDKLKAVKGFRNVII.
tgl4_human 627  TIQSQIKCTPIKTGPKKFIVKLSSKQVKEINAQKIVLI.
tglh_tactr 638  VAVHTVRLIPQKPGPRKIVATFSSRQLIQVVGSKQVEV.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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