1lvl - reference 1


Name                 dihydrolipoamide dehydrogenase												

Number of sequences              4
Alignment Length                 517
Longest Sequence                 449
Shortest Sequence                401
Average Percent Identity         19
Maximum Percent Identity         26
Minimum Percent Identity         15

Sequence Name    SWISSPROT Accession
1lvl                 P09063         
3grs                 P00390         
1nhp                 P37062         
1fcdA                Q06530         

Family   1lvl 3grs
Family   1nhp
Family   1fcdA


1lvl         1  qqtiqtTLLIIGGGPGGYVAAIRAGQLg..IPTVLVEgq..alggtclni
3grs         1  ..vasyDYLVIGGGSGGLASARRAAELg..ARAAVVEsh..klggtcvnv
1nhp         1  .....mKVIVLGSSHGGYEAVEELLNLhpdAEIQWYEkg.dfisflsagm
1fcdA        1  ...agrKVVVVGGGTGGATAAKYIKLAdpsIEVTLIEpntdyy..tcyls

1lvl        47  gcipskalihvaeqfhqasrftepsplgisvasprldigqsvawkdgivd
3grs        45  gcvpkkvmwntavhsefmhdha...dygfpscegkfnwrvikekrdayvs
1nhp        45  qlyleg......................................kvkdvn
1fcdA       46  nevigg.......................................drkle

1lvl        97  rlttg.vaallkkhgvkvvhg.wakvldgk..qvevdg......qriqcE
3grs        92  rlnai.yqnnltkshieiirghaaftsdpk.ptievsg......kkytaP
1nhp        57  svrymtgekmesr.gvnvfsnteitaiqpkehqvtvkdlvsgeervenyD
1fcdA       57  sikhg.ydglrah.giqvvhd.satgidpdkklvktag.....gaefgyD

1lvl       137  HLLLATGsssv.....elpmlplggp.............visstealapk
3grs       134  HILIATGgmpstphesqipgaslg................itsdgffqle
1nhp       106  KLIISPGavpfel...dipgkdldniy.....lmrgrqwaiklkqktvdp
1fcdA       99  RCVVAPGieliyd...kiegyseeaaaklphawkageqtailrkqledma

1lvl       169  alpqHLVVVGg......gyigLELGIAYrkl...gaqVSVVEARERilpt
3grs       168  elpgRSVIVGa......gyiaVEMAGILsal...gskTSLMIRHDKvlrs
1nhp       148  ev.nNVVVIGs......gyigIEAAEAFaka...gkkVTVIDILDRplgv
1fcdA      146  dg.gTVVIAPpaapfrcppgpYERASQVayylkahkpMSKVIILDSsqtf

1lvl       210  .yDSELTAPVAESLkkl..GIALHLGHSVEgye...ngcllandgkgg..
3grs       209  .fDSMISTNCTEELena..GVEVLKFSQVKevkktlsglevsmvtavpgr
1nhp       188  ylDKEFTDVLTEEMean..NITIATGETVEryeg..dgrvqkvvtd....
1fcdA      195  skQSQFSKGWERLYgfgteNAMIEWHPGPDsavvkvdggemmvetafg..

1lvl       252  ....qlrleADRVLVAVGrrprtkgfnlecldlkmn..gAAIAID..erc
3grs       256  lpvmtmipdVDCLLWAIGrvpntkdlslnklgiqtdd.kGHIIVD..efq
1nhp       230  ....knaydADLVVVAVGvrpnt..awlkgt.lelhp.nGLIKTD..eym
1fcdA      243  .....defkADVINLIPPqra...gkiaqiagltnda..GWCPVDiktfe

1lvl       294  qTSMHNVWAIGDVAge..........pmlahrAMAQGEMVAEIIagka..
3grs       303  nTNVKGIYAVGDVCgk..........alltpvAIAAGRKLAHRLfeyke.
1nhp       270  rTSEPDVFAVGDATlikynpadtevnialatnARKQGRFAVKNLeepvk.
1fcdA      283  sSIHKGIHVIGDASia.......npmpksgysANSQGKVAAAAVvvllkg

1lvl       332  ..rrfepaaiaavcft..dpevvvvgktpeqasqqgl..dcivaqfpfaa
3grs       342  .dskldynniptvvfs..hppigtvgltedeaihkygienvktystsftp
1nhp       319  pfpgvq.gssglavf...dykfastgi.nevmaqklgk.etkavtvvedy
1fcdA      326  eepgtp.syln.tcysilapaygisv..............aaiyrpnad.

1lvl       376  ngramslesksgfvrvvarrdnhlilgwqavgvaVSELSTAFAQSLEMGA
3grs       389  myhavtkrktkcvmkmvcankeekvvgihmqglgCDEMLQGFAVAVKMGA
1nhp       363  lmdfnpdkq.kawfklvydpettqilgaqlm..sKADLTANINAISLAIQ
1fcdA      359  ..........gsaiesvpd.....sggvtpv..dAPDWVLEREVQYAYSW

1lvl       426  CLEDvagtiha......
3grs       439  TKADfdntvai......
1nhp       410  AKMTiedlayadfffqp
1fcdA      392  YNNIvhdtfg.......

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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