2abk - reference 4


Name                 endonuclease iii

Number of sequences              6
Alignment Length                 456
Longest Sequence                 344
Shortest Sequence                211
Average Percent Identity         30
Maximum Percent Identity         50
Minimum Percent Identity         17

Sequence Name    SWISSPROT Accession
2ABK                 P20625         
END3_RICPR           O05956         
END3_BACSU           P39788         
UVEN_MICLU           P46303         
Y613_METJA           Q58030         
1MPGA                P04395         

Family   2ABK END3_RICPR END3_BACSU UVEN_MICLU Y613_METJA
Family   1MPGA


2ABK         1  ..................................................
END3_RICPR   1  ..................................................
END3_BACSU   1  ..................................................
UVEN_MICLU   1  ..................................................
Y613_METJA   1  ..................................................
1MPGA        1  mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvta

2ABK         1  ...................................mnkakrleiltrlre
END3_RICPR   1  ...................................mqaqimnkifeifsk
END3_BACSU   1  ..................................mlnlkqiefcldkigd
UVEN_MICLU   1  .....................metestgtptgetrlalvrrarridrila
Y613_METJA   1  ......................................melieillkkln
1MPGA       51  ipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlga

2ABK        16  n.nphpttel.nfsspFELLIAVLLsaq....atdvsvnkataklypvan
END3_RICPR  16  n.npkpqtel.iykndFTLLVAVILsar....atdisvnlatkhlfetyn
END3_BACSU  17  m.fphaecel.vhsnpFELVVAVALsaq....ctdalvnrvtktlfqkyk
UVEN_MICLU  30  etypyavael.dfetpFELLVATVLsaq....ttdvrvnaatpalfarfp
Y613_METJA  13  k..navvteiakdkdpFKVLISTIIsar....tkdevteevskklfkeik
1MPGA      101  a.rp..glrlpgcvdaFEQGVRAIL.gqlvsvamaakltarvaqlygerl

2ABK        60  t..........paamlelgvegvktyiktiglynskaeniiktcrilleq
END3_RICPR  60  t..........pekflelgeeglkkyiksiglfnskakniialcqilikn
END3_BACSU  61  r..........pedylavpleelqqdiksiglyrnkakniqklskmiied
UVEN_MICLU  75  d..........ahamaaatepelqelvrstgfyrnkasailrlsqelvgr
Y613_METJA  57  d..........vddllnideekladliypagfyknkaknlkklakilken
1MPGA      147  ddfpeyicfptpqrlaaadpqalkalgmp....lkraealihlanaaleg

2ABK       100  h.ngevpedraalea....lPGVGRKTAnvvlntafgwptiav.dthifr
END3_RICPR 100  y.qtsipnnfkelvk....lPGVGRKTAnvvlnclfamptmav.dthvfr
END3_BACSU 101  y.ggevprdrdelvk....lPGVGRKTAnvvvsvafgvpaiav.dthver
UVEN_MICLU 115  h.dgevparledlva....lPGVGRKTAfvvlgnafgqpgitv.dthfgr
Y613_METJA  97  y.ngkvpdsleellk....lPGVGRKTAnlvitlafnkdgicv.dthvhr
1MPGA      193  tlpmtipgdveqamktlqtfPGIGRWTAnyfalrgwqakdvflpddylik

2ABK       144  vcnrtqfapgknveqveekllk.vvpaefkvdchhwlilhgrytciarkp
END3_RICPR 144  vskriglakgntaaivekellq.iidekwltyahhwlilhgryickarkp
END3_BACSU 145  vskrlgicrwkdsvlevektlmrkvpkedwsvthhrliffgryhckaqsp
UVEN_MICLU 159  larrlgftdetdpgkgrarrgrpvppardwtmlshrlifhgrrvcharrp
Y613_METJA 141  icnrweivdtetpeetefelrk.klpkkywkvinnllvvfgreicssks.
1MPGA      243  .....qrfpgmtpaqirrya......erwkpw.rsyallhiwytegwqpd

2ABK       193  rcgsci..iedlceykekvdi.............................
END3_RICPR 193  gcnicp..ikeyceyyintfss............................
END3_BACSU 195  rcaecp..llslcregqkrdkkglvkr.......................
UVEN_MICLU 209  acgrcp..iarwcpsyaagetdperarallayelkpgreellellragrt
Y613_METJA 189  kcdkcfkeikekcpyyekikhfenilkkfnfrkvsknkipnekgtyilki
1MPGA      281  ea................................................

2ABK       212  ..................................................
END3_RICPR 213  ..................................................
END3_BACSU 220  ..................................................
UVEN_MICLU 257  agaagprpraggxapglpaqpfr...........................
Y613_METJA 239  rlkegkkikfgkterffkkgyyfyigsafgnsmnlknrierhlkddkkmh
1MPGA      283  ..................................................

2ABK       212  ..................................................
END3_RICPR 213  ..................................................
END3_BACSU 220  ..................................................
UVEN_MICLU 280  ..................................................
Y613_METJA 289  whidyllkygkieeiyitnervecevanefikkfdfvenfgcsdckcksh
1MPGA      283  ..................................................

2ABK       212  ......
END3_RICPR 213  ......
END3_BACSU 220  ......
UVEN_MICLU 280  ......
Y613_METJA 339  lfylkp
1MPGA      283  ......

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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