1ad3 - reference 1


Name                 aldehyde dehydrogenase			

Number of sequences              4
Alignment Length                 459
Longest Sequence                 447
Shortest Sequence                424
Average Percent Identity         47
Maximum Percent Identity         65
Minimum Percent Identity         41

Sequence Name    SWISSPROT Accession
dha2_yeast           P32872         
dhac_mouse           P24549         
dha5_yeast           P47771         
dhal_ecoli           P23883         

Family   dha2_yeast dhac_mouse dha5_yeast dhal_ecoli


dha2_yeast   1  ..vseksqhdDDK.....AVVDISERGRLLNILADLIERDRDILAAIEHL
dhac_mouse   1  vdkavkaarqAFQIGSPWRTMDASERGCLLNKLADLMERDRLLLATMEAL
dha5_yeast   1  vdkavkaaraAFDNV..WSKTSSEQRGIYLSNLLKLIEEEQDTLAALETL
dhal_ecoli   1  idramsaargVFERG.DWSLSSPAKRKAVLNKLADLMEAHAEELALLETL

dha2_yeast  44  DNGKPFDEAYLLDLASVLKELRYTAGWADKL.hgtlrfaitiptfqdlrf
dhac_mouse  51  NGGKVFANAYLSDLGGCIKALKYCAGWADKI.hg.....qtipsdgd..i
dha5_yeast  49  DAGKPYHSNAKGDLAQILQLTRYFAGSADKFdkg.....atipltfn..k
dhal_ecoli  50  DTGKPIRHSLRDDIPGAARAIRWYAEAIDKV.yg....evattsshe...

dha2_yeast  93  LRYTRHEPVGVCGEIIPWNIPLLMYIWKIGPALAAGNTVVLKPEELTPLT
dhac_mouse  93  FTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLT
dha5_yeast  92  FAYTLKVPFGVVAQIVPWNYPLAMACWKLQGALAAGNTVIIKPAENTSLS
dhal_ecoli  92  LAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS

dha2_yeast 143  ALTVATLIKEAGFPPGVVNVVSGYGPTAGAACLSHKDNDKLAFTGSTLVG
dhac_mouse 143  ALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVG
dha5_yeast 142  LLYFATLIKKAGFPPGVVNIVPGYGSLVGQALASHMDIDKISFTGSTKVG
dhal_ecoli 142  AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTG

dha2_yeast 193  KVVMKAAAKSNLKKVTLELGGKSPMIVFIDA.DLDWAVENAHFGVFFNQG
dhac_mouse 193  KLIKEAAGKSNLKRVTLELGGKSPCIVFADA.DLDIAVEFAHHGVFYHQG
dha5_yeast 192  GFVLEASGQSNLKDVTLECGGKSPALVFEDA.DLDKAIDWIAAGIFYNSG
dhal_ecoli 192  KQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQG

dha2_yeast 242  QCCIAQSRITVHESIYDEIVERDLEKAkkqv....lgNPFESDTRYGPQI
dhac_mouse 242  QCCVAASRIFVEESVYDEFVKRSVERAkkyv....lgNPLTPGINQGPQI
dha5_yeast 241  QNCTANSRVYVQSSIYDKFVEKFKETAkkewdvagkfDPFDEKCIVGPVI
dhal_ecoli 242  QVCIAGTRLLLEESIADEFLALLKQQA.qnw...qpgHPLDPATTMGTLI

dha2_yeast 288  LKIEFDSIPRLINSAKAEGakvlcgggrdd...scvgyyiqPTVFADVTD
dhac_mouse 288  DKEQHDKILDLIESGKKEGaklecgggrw....gnkgffvqPTVFSNVTD
dha5_yeast 291  SSTQYDRIKSYIERGKREE.kldmfqtsefpiggakgyfipPTIFTDVPQ
dhal_ecoli 288  DCAHADSVHSFIREGESKG.qllldgrna.....glaaaigPTIFVDVDP

dha2_yeast 335  EMRIAKEEIFGPVITISRFKSVDEAIKRVDNTKYGLAAYVFTKD..KAIR
dhac_mouse 334  EMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAIT
dha5_yeast 340  TSKLLQDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVFTKDVKKAHM
dhal_ecoli 332  NASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHR

dha2_yeast 383  ISAALKAGTVWVNCVHVASYQIPFGGNKNSGMGRELGEYGLe........
dhac_mouse 384  VSSALQAGVVWVNCYIMLSAQCPFGGFKMSGNGRELGEHGLyeytelktv
dha5_yeast 390  FARDIKAGTVWINSSNDEDVTVPFGGFKMSGIGRELGQSGVdtylqtkav
dhal_ecoli 382  MSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALekftelkti

dha2_yeast 425  .........
dhac_mouse 434  amkisqkns
dha5_yeast 440  hinlsldn.
dhal_ecoli 432  wi.......

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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